Ccau012907.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- ct
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000150.1:5831970-5903466[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.9e-27 6.6e-23 80.6 0.0 3 72 1135 1205 1133 1210 0.95 2 3 6.8e-32 6.5e-28 96.7 0.0 3 77 1602 1677 1600 1679 0.96 3 3 4.2e-31 4e-27 94.1 0.0 3 76 1867 1941 1865 1944 0.96
Sequence Information
- Coding Sequence
- ATGAAACGCGAGCCCTCCAACTCCGTGCCGCCCGACTCCAAGTCTCTGCTCAACTACTCCTCACCTGGCGACAATTGTCGCACGTCGCGCGTCGccttaaatCGCGCTACTCTAGCCGAGAAGGAAGTGAACACACTCAAGGAGCAACTATCCACAAATACGCCTAGCAgcaataatagcaacaacagcaacgacaacaacaacaccggagcagcagcagcaacaacaactgcaagcATTGAGTGCTTGGAGgactcagcagcagcagcagcagagagtACAGTCAACGAGAGCGAAAGCGAGCGTAAGCTGCTTAACAGCGTTGCAGCAGCGATAACGCTGCATCAGAACGGCGGCAATCTGCTGGCCACCAATACACCATCACCATCGCCGCCATTGCTCAGCgccgagcagcagcagcagttgcagagCAGCCTGCAGAACGGCGTCAGTGTGAACGGTGCCGCTGCGGCCTGCCTTAATCCGAAGCTCTTCTTCAATCACGCACAGCAAATGATGATGGaagcggcggctgctgctgctgcggcggctgcagctgcagcggctgcacaacaacaacagcaatcgCCAATGCATTCGCCAACAGGTGGCGCTGCTGTGCAGCATAACGCTGGCAGCATAGTGAGCAGcacacagcaacagcaacaacaacaacagaacagCAGCCAAAATGTTGCTGAACAAACAGCTGTGGGTAATAGCAGctgcggcagcaacaacaataacaacaacaacagccagaacaacaacagcaacaatgttgcTGAAGACGATGATGAGGACGATGAGGAAGATCATGATGAcgccgatgatgatgatgatgataatgatgatgttgcGGTCATGTCTAATACTGCTGGCTCTAATGCTGCTGCAGCTAATACTCAGGTTAGAACCAGAACTGATAGCATAACTGAGGAGCTAAACGAACAGCAGGCGATGGATATTGAACAGCCGGCGAGGCAGCAAGAGCGCCAGCTAGAGCTGGACAATGATGCAGATGATGCTGAAGCTAGTTTAAATGTTAGCAATAATCATAATACGGATAGCAATAATAGTTGTAGTCGaaagaacagcaacaagaatgtgccgcaacatgttgcaatgcgtgataataatgataatgagCAACATGTGGCCAGTGCTGAGGATGATGATTGTACCAACAATaatactaacaacaacaataacaatgagaAGCGCAAGAAGCGCAATgccagtaacaacaacaacaacaatcaagcTGTTTTATTAGCTGCCAAAGATAAAGAGATTAAAGCACTTTTGGAGGAGTTGCAACGCCTGCGTGCGATAGAACAAACTCATCTAATACACATTCAACGCCTTGAGGAACACATAGAGGTGAAGCGCCAGCACATAATGCGTCTGGAGGCGCGTTTGGATAAGCAACAGATAAATGAGGCACTGGCTGAGGCTACCGCCTTGGCGGCCACAACCGCTGCAGCtgctaccaacaacaataacaactgcagcagtaacaacgacaacaacaacgtcgaTGCAACACATGAGGCTATCAATGATTTGGCAGTAGCATCCAAATTGTCTGAGCGATTGCCTGCCGCAGATGAGCAGCACTGCACAAATGTGGATGATGACGATGCAGTCGATGAAGAGGCTGAGGAGGAAGAAGAGGAGCCAGCCGAGGATGTCGATACGTTGCATGCCAACAGTACAGTGGAAAGCGGCgagttgaaaatcaaaaaggaGCAACACAGTCCATTGGATCTGAATGTGCTCAGTCCACAGTCGGCCATAGCCgctgcagcggctgctgcgGCCGCTGCCGCCTGCGCCAATGATCCAAACAAATTCCAGGCATTGCTGATAGAACGCACCAAGGCACTGGCCGCCGAGGCGCTCAAAAATGGAGCCAGTGAAGCGGCCAATGCAGCCAGTAAAGAAATGCCGcaagcagcagaagcagctaAAGACGTCGGCGACGCCGCAGCATccacagccacagcagcaacagcaacagcaacagctactACTGTTACAGCTGAGCTAACAGCTGAAACAGCTGCAAGTAATAACAGCGGAACgcatgaaaatgaaacagatgaagcagcatcagcagctgATAAACAGCTGATGGCAGCATCAGCTAGCAGTAGTCCATTGAATAAAATGCccaaaatcgaaatcgaagatgatgatgaagatgaagaagatgaagacgCAGACGCAGAGCTCGAAAAGCCGCTAACGCTGGAAGAGCAGCTGGTGAACAGTTATTGGCGGCGCGGCTTTGAAgccagcgcagcagcagcagcggcaataacaacaacagcaactgcagcgAGCAAAACGCCAACAATTTATCAAAATGCCaatttgccacaaaaacagcaacaacaacaacaacagcaacagccagCCGTCCAGCTGctgccaccaccaccgccgccgccaccaccacccATGAGCCACTATGCCGctcagcaacatcaacaacatcaacaacaacaacaacagcaacaacaacactatcaacaacagcaacatggACCATCGTCCACAGCGCTGCTAAGTCAATTGGTTAACTCAACTTTCTCAcacgcttcttcttctacccCCTCCTCCTCTTGTTCCAATTCCAAAATTCCGCTGCGTTCAGATGGCAATCCACTGCATCAGccacatcatcatcagcagccaACGCCGCCGTCACTACCGCCGcatctgcagcagcagcaacagcagcatctGCCAcaacaccagcagcaacagcaacagcagctactGCAGAACCACAACAACTCCAGCCAGTCCAATGCTGATTTAGAGCACAAACCTGCCGCCACAGCGCTGGCTCTCaaccatcatcatcaccatcatcatcaggGACATGGTCTGGGTCATCATGCCCATCATTTGCACGATGGTTCCAACAGCTCCAGCGCCAATAGCACGCCCAATGCCACTGCCGGTGGCAACGCCGCTGCACAGCTGGCGGCCAGTATTGCCTCCACGCTAAATGGCAACAAATCTTTGCTACAAGCTGCTGCCGCAGCCAACGCTGCTGCCAATGCcgaggacaacaacaatagtttAACGCCCAATGCCAAcgcagctgccgctgccgcagccATGGCTGCACATGCGCAACACGCACATGCCGCAGCAGCCTTGGGTGCGCCGGGTTTCTTGCCCGGCTTGCCAGCGTTTCAGTTTGCCGCCGCTGCGGCCGCTGGACAGGAACCGCGCGCTCATTATCGTTTCGCCGATGCTGAGCTGCAGCTGCCGCCGGGCGCTTCAATGGCCGGACGTTTGGGTGAATCGTTAATACCCAAGGGTGATCCCATGGAGGCCAAGCTTCAGGAAATGTTGCGCTACAACATGGACAAGTATGCCAATCAGGCGCTAGATACGTTGCACATATCGCGGCGTGTGCGGGAGCTGTTGTCAGTGCATAACATTGGACAGCGTTTGTTTGCCAAGTACATACTGGGCCTGTCGCAGGGCACTGTGTCGGAGCTGTTAAGCAAGCCGAAGCCCTGGGATAAGCTAACCGAGAAGGGACGTGACAGCTATCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCGGTAATGCTGCTCAAATCGCTCATACCCAAGAAAGATTCTGGCCTGCCGCAATATGCTGGACGCGGTGGCGGCGATGATTCCATGTCCGAGGATCGCATTGCACATATACTCAGCGAGGCCTCCTCGCTGATGAAGAGCAATGCCGTGCAGGAGCAGCAGCGACGCGCCTCGGCGCATGGCGATGATACGCACAGTAATGAGGACAGCAAGTCACCGCCACAGACCTGCACTTCACCTTTCTTCAAGGTGGAACAGCTGAAGCAGGAGCATGCACAGCGTGAACAGCAGCGCGAGCAGCGTGAGGCAGTtgctcagcagcagcagcgagaGCAACAGCAACGCGAGCAGCGTGAACAGCAGCAACGTTTGCGACATGAGGATATGGCGCAGGATAAGATGGCGCGTCTGTATCAGGAGATAATGGCGCGTACGCCCAGAGAAGCCGCTTTTCCCAGCTTCCTGTTGTCACCGTTCTTTGGTGGCGCCGCCGGCATGCCCAGTGCCGCCAATGCATTCCCCGCCGCCATGGCTGCCGATGAGAATATGCGTCATGCCTTTGAGCGTGAGATTGccaagctgcagcagcagcaacaacaacagcatcaggCAGCCAGTTTTCCAAATTTCTCCAGCCTAATGGCACTACAGCAGCAGGTGCTCAATGGCGCACAGGATCTCTCACTGGCCAGCGGCAAGGACATGCTTAAAGACATTAAAGTGAATGGACAGCGTGCCTCACTCGATCACTCACAGAGCTCTAAGGATGGCGATCGCGATGACGAACGCAGTCTGGAACGTGAGCGTCACAGTGGCAGCGCAGCAGTTGCGCCCGGCGGCAACAGAAGCAGCTCCGGCTTTGGCTTGCATGGCTGCAAGTCGGAGAGTGGCGCCAGTGTTGGCACTGCTGGTGGTGGCGGCACTCCTGCACCACCCGCACCACCGAGTAGCAATGCCTCGGCACAGCATACCAGCAATTCGGCAGCGCCCAGTCCTTTGAGTAACTCCATATTGCCGCCAGCTTTGAGCCAGGGCGATGAGTTTGCAGCCACAGCGAGTCCTTTGCAACGCATGGCTTCCATAACAAACTCTTTGATCACACAGCCACCAGTAACGCCACATCATTCGACGCCACAGCGGCCCACCAAGGCGGTACTGCCGCCCATAACCCAGCAGCAGTTTGATATGTTCAACAATCTCAATACTGAGGATATTGTGCGTCGTGTCAAGGAAGCGTTGTCCCAGTACAGCATCTCGCAGCGTCTGTTTGGCGAATCTGTGCTGGGCCTGTCACAAGGTTCGGTCTCCGATTTGCTGGCACGACCCAAACCCTGGCACATGCTCACCCAAAAGGGTCGTGAGCCCTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCCGTGCACAAGCTGGTGGCCAGCCAGTACAAGATTGCGCCCGAAAAGCTCATGCGCACGGGTAGCTACAGCGGCAGTCCACAGATACCACAGGGtttggccaacaaaatgcaaGCGGCTCTTCCCATGCAAAAGATGATGAACGAGCTGAAACTGCAGGAGCCCGCCCAAGCGCAACacattatgcaacaaatgcagGCAGCTGCCGCCATGTCTGCGGccatgcagcagcaacaagctgccgccgctgcggcgcagcaacaaagccaacaccaacaacatgCCGCAGCGCAagctgccgccgctgcagcGGCCGCTGGATTGCATCATCAGAACATGCTGCTAACTTCGCCAGGTTTGCCGCCGCAGCATGCTATAAGCTTGCCGGCAGCCACTGGCGCTGCTGGCGCTGGCGGCGTCGTGGGTGCGCCTGGAACGCCTGTAACGCCAGTTAGTGGCGCATCCCTTTCCGGCCCGGAAAAGAAGCCCATGTTGATGCCGGTGCATAGCACGCATGCACCAAATGCCATGCGCAGCTTGCATCAGCACATGTCGCCCACCGTCTATGAGATGGCTGCGCTGACGCAGGATCTGGACACGCACGACATTACCACCAAGATCAAGGAGGCGCTGCTGGCCAATAACATTGGGCAGAAGATATTCGGTGAGGCTGTGCTGGGCCTGTCGCAGGGCTCTGTCTCTGAGCTGCTGAGCAAGCCGAAACCCTGGCATATGCTCTCGATCAAGGGTCGCGAGCCGTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGGCTGCAGGTGATCAAGAATGAGCGCAGAGAGGCCAGCAAGCGTCGACGCTCGACGGGTCCGAATCAGCAGGACAACAGCTCGGATACCTCAAGCAATGATACCAACGATTTCTATACCAGCAGTCCGGGACCCGGTTCTGTGGGCTCTTCAGTTGGCGGCGCGCCgccaaataaaaaacaacgcGTGCTATTCTCTGAGGAGCAGAAGGAGGCCTTACGCTTGGCCTTCGCCTTGGATCCGTATCCAAATGTGGGCACCATCGAATTTCTGGCCAACGAGCTGGGCCTGGCAACACGCACCATAACCAACTGGTTTCACAATCATCGCATGCGCTTAAAGCAACAGGTGCCACATGGTCAGCCGGGCATTGATAATCCCATACCCAGCCGCGAAAACACCAATGCCACGCCCTTTGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTTTGGTCGAGCTGCACAAGGAGCGCATGGGCCTGAGTGGTGCGCCCATTCCCTACCCACCTTACTTTGCAGCCGCAGCGCTGCTGGGTCGCAGCTTGGCGGGCATACCCGGTGCTGCAGCGGccgctggtgctgctgctgctgcggcggcggctgctggcgctgccggCGAGAACGAGTTGCAGGCCTTGAATCAGGCTTTCAAAGAACAAATGAGCGGCCTGGACTTGTCCATGTCAACGCTGAAGCGTGAGCGCAGCGATGACTATCAAGATGAGCTGGATCTGGATGCCAGCGCGCATCACATGAGCGACAATGAGTCGCTGGATGATGACAAATCCTCGAACATGCCCTCGGACTATGAGAAGGCCATGCAAAAGTCTGCCTTGGCCTCCGCTGCCGCCTATATGAGCAATGCCGTGCGCAGCTCACGTCGCAAGCCCGCAGCGCCACAATGGGTAAATCCTGCTGGCGCGGGCACGCCCGTTGGTGCAAGTGGTGTAGCTGCCgtagccgcagcagcagcagcagcagcggcggcagcagcagcagcagctgcggaCAGCGAGCGCATTATCAATGGCGTCTGCGTCATGCAGCCCTCGGATTATGGACGCGATGAGCCAGAGGGCAAGTCAACGGGCGCGTGCAGCGAGGCAGCCAACAGCGAGAGCGGCGAGCATGAGCATGCACATTTAGATATGGAACAGAGCTACATGGAGCCCGAGGTGCACATCAAGCAGGAAGAAGATGACGACGAGGAAGAGCAGCTGAACAATGAGTGCGGCAGCGTTGATGCAGCAACAGCGGAAGAGAAGAAAATCAAGGTGATCAATGAGGACAAGCTGCGCCTGGTGCGCGTGCGACGTCTGAGCAGCAATGGAGCGTCAGGTAATCCGGCCGAACTGGACGAGGGCTGCGCGccaacgcagcagcagcagctagcGGGCGCAGCGCCGACGCCAGCAGCGGCTTGGAACTATTAA
- Protein Sequence
- MKREPSNSVPPDSKSLLNYSSPGDNCRTSRVALNRATLAEKEVNTLKEQLSTNTPSSNNSNNSNDNNNTGAAAATTTASIECLEDSAAAAAESTVNESESERKLLNSVAAAITLHQNGGNLLATNTPSPSPPLLSAEQQQQLQSSLQNGVSVNGAAAACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAQQQQQSPMHSPTGGAAVQHNAGSIVSSTQQQQQQQQNSSQNVAEQTAVGNSSCGSNNNNNNNSQNNNSNNVAEDDDEDDEEDHDDADDDDDDNDDVAVMSNTAGSNAAAANTQVRTRTDSITEELNEQQAMDIEQPARQQERQLELDNDADDAEASLNVSNNHNTDSNNSCSRKNSNKNVPQHVAMRDNNDNEQHVASAEDDDCTNNNTNNNNNNEKRKKRNASNNNNNNQAVLLAAKDKEIKALLEELQRLRAIEQTHLIHIQRLEEHIEVKRQHIMRLEARLDKQQINEALAEATALAATTAAAATNNNNNCSSNNDNNNVDATHEAINDLAVASKLSERLPAADEQHCTNVDDDDAVDEEAEEEEEEPAEDVDTLHANSTVESGELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGASEAANAASKEMPQAAEAAKDVGDAAASTATAATATATATTVTAELTAETAASNNSGTHENETDEAASAADKQLMAASASSSPLNKMPKIEIEDDDEDEEDEDADAELEKPLTLEEQLVNSYWRRGFEASAAAAAAITTTATAASKTPTIYQNANLPQKQQQQQQQQQPAVQLLPPPPPPPPPPMSHYAAQQHQQHQQQQQQQQQHYQQQQHGPSSTALLSQLVNSTFSHASSSTPSSSCSNSKIPLRSDGNPLHQPHHHQQPTPPSLPPHLQQQQQQHLPQHQQQQQQQLLQNHNNSSQSNADLEHKPAATALALNHHHHHHHQGHGLGHHAHHLHDGSNSSSANSTPNATAGGNAAAQLAASIASTLNGNKSLLQAAAAANAAANAEDNNNSLTPNANAAAAAAAMAAHAQHAHAAAALGAPGFLPGLPAFQFAAAAAAGQEPRAHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGGGDDSMSEDRIAHILSEASSLMKSNAVQEQQRRASAHGDDTHSNEDSKSPPQTCTSPFFKVEQLKQEHAQREQQREQREAVAQQQQREQQQREQREQQQRLRHEDMAQDKMARLYQEIMARTPREAAFPSFLLSPFFGGAAGMPSAANAFPAAMAADENMRHAFEREIAKLQQQQQQQHQAASFPNFSSLMALQQQVLNGAQDLSLASGKDMLKDIKVNGQRASLDHSQSSKDGDRDDERSLERERHSGSAAVAPGGNRSSSGFGLHGCKSESGASVGTAGGGGTPAPPAPPSSNASAQHTSNSAAPSPLSNSILPPALSQGDEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQAALPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAAAQQQSQHQQHAAAQAAAAAAAAGLHHQNMLLTSPGLPPQHAISLPAATGAAGAGGVVGAPGTPVTPVSGASLSGPEKKPMLMPVHSTHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGIDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAAGAAGENELQALNQAFKEQMSGLDLSMSTLKRERSDDYQDELDLDASAHHMSDNESLDDDKSSNMPSDYEKAMQKSALASAAAYMSNAVRSSRRKPAAPQWVNPAGAGTPVGASGVAAVAAAAAAAAAAAAAAAADSERIINGVCVMQPSDYGRDEPEGKSTGACSEAANSESGEHEHAHLDMEQSYMEPEVHIKQEEDDDEEEQLNNECGSVDAATAEEKKIKVINEDKLRLVRVRRLSSNGASGNPAELDEGCAPTQQQQLAGAAPTPAAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338226;
- 90% Identity
- iTF_00336623;
- 80% Identity
- iTF_00336623;