Ccau010240.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- kn
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000142.1:11185361-11194007[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-51 9.3e-48 163.0 0.2 38 137 91 190 55 194 0.92
Sequence Information
- Coding Sequence
- ATGTACGCGCTGAGAAGGAGTGCGCGAGTTGCCGAAATCGAAAGTGCCGCAGCGACAGTTTTTGTTAAGATGACAACGGGGTTTTTACATTCAGCGTCGGCaaatcaacaacagcaacaacaagaacatttgccacaacagcaacaaaatcaaaatcatatTCAGCATCAAAATCAggtgcaacagcagctgcatttgCATGAAATATCCGACAATCTGCAACAGGACATAAATCATAACCAAAGTCTTAGAAGTGCTAACAACAAAACCATGCGCTGCGATTCGAGCTTGGGCATTGGCCGCGCCCACTTCGAGAAGCAGCCGCCCAGTAATTTGCGCAAATCGaacttttttcactttgtgaTTGCATTATACGATCGCGCCGGACAGCCCATAGAGATTGAGCGCACGGCATTTATTGGTTTCATTGAGAAGGATTCGGAATCGGATGCTACCAAGACCAATAATGGCATACAATATCGGCTGCAGCTGCTCTATGCGAATGGTGCGCGACAGGAGCAGGACATATTCGTGCGACTCATCGATTCGGTAACCAAGCAGACGCTGATGCCCAAGGCGTCACCCTAA
- Protein Sequence
- MYALRRSARVAEIESAAATVFVKMTTGFLHSASANQQQQQQEHLPQQQQNQNHIQHQNQVQQQLHLHEISDNLQQDINHNQSLRSANNKTMRCDSSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQTLMPKASP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -