Ccau010235.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- kn
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000142.1:11148382-11150692[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-119 9.6e-116 387.5 0.0 205 384 1 209 1 213 0.99 2 2 2.1e-07 0.00057 18.4 14.4 422 518 214 309 209 324 0.59
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGGTGGTGATATCCACGCAAGTGGCCGTCGATGGACCCTTGCTGGCCATCTCAGACAACATGTTCGTGCACAACAACTCCAAGCATGGACGCCGCGCCAAACGGCTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCTTATCCGGTCACCCCCTTGCGCCTGACAGTACCTACGATGGTCTTTATCCTCCGCTGCCGGTGGCCACGCCGTGCATCAAGGCGATATCTCCCAGCGAAGGTTGGACCACAGGTGGCGCCACTGTCATTATTGTGGGTGATAATTTCTTTGATGGCCTGCAAGTGGTCTTTGGCACCATGCTGGTTTGGAGCGAGCTGATTACGTCACATGCGATACGTGTGCAGACACCGCCCAGACACATTCCCGGCGTCGTCGAGGTTACGCTCTCCTATAAGAGCAAGCAGTTCTGTAAAGGTTCACCCGGCCGTTTTGTCTATGTCTCAGCACTCAACGAACCCACTATCGACTATGGTTTCCAGCGCCTGCAGAAGCTTATACCACGTCATCCCGGTGATCCGGAGAAACTGCAAAAGGAAATCATCTTGAAACGTGCAGCCGATTTGGTGGAGGCTCTTTACTCCATGCCCAGCAGATCGCCCGGTGGTTCTACCGGTTTCAACTCATATGCCGGCCAGTTAGCGGTAAGCGTGCAGGATGGTTCAGGTCAGTGGACAGAGGACGACTATCAACGCGCGCAGTCCAGTAGCGTGAGCCCGCGTGGCGGCTATTGCAGCAGTGCCTCGACGCCACATAGCTCGGGCGGCTCGTATGGCGCCACAGCAACCACCGCAGTCGCAGCCACAGCGAATGGTTATGCGCCCACACCCAATATGGGCACGCTGTCGTCCTCGCCGGGCAGTGTCTTCAACTCCACATCAATGTCCGTGTCCTCGACGTGGCATCAGGCGCTCGTCCAGCATCATCATGTCGCGCACCCGCATCACTATCCGCATCCGCACCAGCCATGGCATAATCCGGCcgtaacagcagcaacagcagcagtttAG
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSLSGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGSGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATATTAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSVSSTWHQALVQHHHVAHPHHYPHPHQPWHNPAVTAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530692;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00336459;