Basic Information

Insect: Chymomyza caudatula
Gene Symbol: JARID2
Assembly: GCA_035041775.1
Location: JAWNKW010000172.1:222541-230406[-]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.4e-22 9.4e-19 67.7 0.0 6 89 1878 1959 1873 1959 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.4e-22	9.4e-19	67.7	0.0	6	89	1878	1959	1873	1959	0.92

Sequence Information

Coding Sequence: ATGGTTGTCTCGAAAGACAACAAGCGTCGCCGTAAGGAAACAGAGAccccgccgccgccgctgccaacgtcaacaacggcagcagcgcagcagtcAACGGCAACTGCGACTGCGGCAGTGGAGTCATCACCCGAAATGCCCAAAAGaACTAAGGTGCAAGCACAACGCAAATTCGCCCAAGGCCAAAGCGCACCTGCATCCTCTAGTGCTTACGGCTCTGCGCTCAGCGTAGCAACTCCAGGACCCAGTACCTCAACGGAGAGTCAGCCTCCCATCGAGATATTGCCAAACAAATGTCCTAAACCACAAGATTTTCTAACGTTCCTTTGCTTTCGTGGCACACCTGCGTTGCCACCTCACTTGGACTATCTAAATCAGGGCAAATCCAAAGAAACCgatacaacagcaactactAGTAAtaccaacaataataataatagtggcaataaaaaaaacaataccaaTAGAGCGTCCAATAAAAAGAAACGTGGTCGTCCAGCAAAAGCGGGCACCAAAGCAGAAGCTACTAGTACAACAACTGTAACCAAAGCTGCTGAGCTAGACAAAGCCACGGCAACCCTGACAAAAACGGAAAAGGTAAACCACGCTGATAAGCCCGCCACAAGACCAGACAAAGCCGCAAGTGataaaactacaacaacaacaacaacgccaatgCCAACAGTTCTACCCGGCGCCGTGCGCAAGCGTGCAGAGGTCATAGCCGAGGGCAACCGCCGTGGCGCTCGACGTAGTGGCAAAGCTGTAACGCCCGAGCAGAGTAATAGCGTGCCAACTGAAGCCAAGCGCCGCTCCAATCGCGCCAGCACCAAGGAGAGCAAGCCCATGTTAGATGGCGCTTCGAAtgacgaagatgaagaagatgaataTTTCTCAGCACATGATGCCAGTTCAAGGAATGGCAATGATTCGAAGATTGATGCTGCGCCCAACAAGATTTATCAGGCCGCTGCAGCACGAAAATCCGAGACTCCCTCCAAGGATAGCGAAACGGGAAAGTCCGCAGGGGGCAAGCGTGGCagaccagcagcagcaacggctAAAAAAACTGGGGAAGCACTTCCTGCAGAGCTACCAACAAGTGAAAAGTCGAAGGAAAAGGTTCCAGCGCCTCTAAAACGCGTGCGTCAACGCGAGTCGCCAATATTTATACCATCACCAGAGTCTTCAGGGCGTATGACTAGACAGCGCGCTTTTTTTGAACCAGTTAAAGTTGTGCCACAGCAGGAGCCTCCTGACAAACAGGAAGATGAATGTGCAGCGGAACCCCATGAGGAGACACCTGAGAAAAGACCACCtcataacaaaaaagaagctaAAGAAGCGGCCAGGGAAACAAAGGAAACTAAAGAGAAAATCAACTCCAGTATTTACGCCAAAGATGCCGCCAAGCAGCATCTAGAGAACGGTGACAAAGATACCGGCAGCAAGGACAAAAAAAGTCTAAATGTATTTGATTTCAGTTCAGATGATGAGCAGCCGCTGGCCAAAGCCATCAAGCTTAAAAAAGGCGGCAAGACAAGTCCCAAaaaagctgcagcagcggcgcaGCGGGGCCGCAAGATAGCGACTGATAAAAAACCCATAGAGGAGATAAAACCTTTGACCTTGCCTGAGCTCAAAGTCGATGCAATACCAAAGCTtgaaaatgacaacaacaaaggtaCAGCAGTTAAACGTGCTAAAGCAGGCAAGAAAAAAGCTGATGAACCAGCAGTTATTGAACAAAAGCTGTCGCCACCGTCGCCTAAAAAACCATCCAGTGTTACTGTGGCACGACAATCACGCAAAGGAAAGGGCAAAGTAGAACAGGATACAGTTAACAAACCGCGCTCGCCTAGTCCACCAATGCGTAGTCAAAGGCCTTCCCGGAAGACTAAAGAAGCGGCTGCCATATATATGGGCATTATTGGCCACAAACTGCAGATGGCGGATGACGAAGAAGATGATTTATCTCTAAGCAGCTTTCCCGACATACCTAATGTAAAGGAGATGGAAAAAATGgagaaagaaattaaaaaaaatgcagcacaaCAGCAGCCGGGAAAGTTGTATCTGCCCGAGGCTATGACGGGGCCAACGGCAGCAAAAAACGCACGCAAACCGTCGCCCAAACCTACAAAAGTAGCTAACTCAGCAACGGACCTGCCAGGCGCAACCGAGGCAGTTGCTACTACAACTCCAGAGGAAAAACCTCCTCCGCCACGCCGTGGACGTCCGCCCAAGCAGAGTAAAGCCACAACTACAGCCGCTGCGCCACCCAAACGCGAAATCGAGGGAATGCTTGTCAAAAAAGGTGCACTGGCCAAAATGACCTCTAGCGTACAGCAATCCGAGCAAGCCAAGCCCAAAGCCAAGTCCGAACAGAGTAATAAAGTCGACTCCGATGAGGAGGAAGATTTTTTAATCAATGAAGAGCTGAACGAAACCAAACGtaaattggaaaaaagttttagcGATTCAGATGATGAGCCACTGGCCATCAAAGTACCGGTCAAGGGAAACAGCATTGAAAAGGATGAGCTAAGCCTTGGCCAAGATGTGCCCAAGCTGCTGGGCACGCCACCCAAGCAGACAGTGGTGCAAACCACTACTAATACAACGCCAACAGGCATGACTAGCACCACGCAACTCACCATGTTACCACTGACCGCTAAGCCGACGCAGTTTGGCGCATTACCTTTGCCCagcacaagcagcagcaattcCATTTCGCCGCCTAGCTACGCTCAGCCTTTGGTCAGTACATCACCAGCAACAGCCACGCTTAAAGCAATGGAAAAAAAGTCACCGGTGCCCACATCCAAGATACTAAATGTGCCGGCTACCTATGCGCTGCCGGGCAGCAACACCGTGTTGCCTGGGGTAACTTTTAATAAGACCTCTTCCTATTTGCCACAGGCTTCGCCGCATTATCACACACCCTATGTGCGTCCACCGCCTACACCGGCGCATCAATTTGCagctagcagcagcagcactgtGAAAGCGCCGCCAGCAACAAGCACGTCTACATTACAGCAATCTCCTTTAAAATATCAGACACCACCCACGACATATCCGCCGCCTATAGAGGCCTATCAGTGTCCCAAAATCAATCCCAACTTTTTGACACCTAAATACGAACGCAGCGCATTGCCGCGTAGCAATAACTTTCCCTCACCATCACCTGTGGCTCGTGGATTGAGCAGTTTATCCACGCCTGGAGCATCAAGTGCAACCATAGCCAATCCCGCGCTGACTACGAAAAGCTCCTTGCCGCCACCTTTGGTACCAGCTGCACTACCTGTGAACCATAGCTCAGTAAATTTTAGCATGTCTACAACAGTAACAGCGGCTACATTGGCCCTTTCGACTCCTACAGTGACGGCATCAACatctgcagcggcagcagcagtcaCTTTGGCCACTCTAGCCACAGCTGTGGCGCCTACGCCGCCATCTGCACACAGCGGCATTAATGTTAATGCCAATGTCAGCTCCGATCCACTCAAGGATGAAATAGGCAGCATACTGGCAGCAAATCTTATGCCCAGCAAGGAGGAGTCcggtaaaatttttggcattgccAGTGTCAGTTTAGCACAGAGCTCAGGGCCCGATAATACCAAATGCACCCTAGGCAAATGCGGCTCCATACACAAACCAGTGCTGGGTCCTGTTGTGCCCACTGAAGGCTACTTTGGTGATCAGTTATCCAGCAAAGAACGCCGCAAAGCGAAGGTTAATATGACTCAtgaacaaatacaaaaatggcTCATTGAATGCTCCTCAAATCCCGATGAAATTCAAGATGATTTGGATGACGATTTTGATGATAGTTTGCGGCCAAATCAATCAACAACGCCGCCACCCACTCGCGATGACAAAGAGTCCACCACCTTTAGTAGCTCCTCCAAGAACACGCGCGAGCTGGGTAAAAGTGAGAGCGCGTGGTCAGCCAAGGGACCTTCTTTAAAGGCTACCCCGGTAGTGGCAGCGCCAGGTCGCAAGGAAGACGATGTGAAGGAAGCGCATGAATTAGATTATGACAAGTCTGCTACGCCAGTAAATCTAACTCAAAAATCCAATGCAATTACGCACGATGCAGCGAACAGTGCGCCAAACTCCGATAAGAAGCTGACAGCAACAGCGACGACGACGCTGGCTGATAAGAAAGCCAAAGAAGCTGCCAaatcaacaacagcagctacaaataTAGCGGGGGCAACTACTAAAACCTCATCACCCGCAGCTAAAGACAATAAAACTCAAGCAGCAAACAAACGCGGTGCTGGCACTCCGACGCCAGCCACCCCGCCGCCCACCAAGCAAAATcgcaataacaaaaagaatgccaCTGCAGGAACGCCTAGCGCAGTCACAGCAGCAACCACAAAGAATACAACTCCAACTTCTACACCAACCACTCCCAAACGCACGCCTGTTTATAATCAAAAAGCAGGCAAGGCACAAACGGAGctcaaacagcagcaactacagCCTGCACCGAGCCAAAAACGCGGCGATTCCTCAGTTTACGCATTCGGTAAGGAGGATGAGCAGGCGTTAGCAAGTGCCGCAGCCAAGCCGGGCGGTAATCGTCGCAAGAATGTCGCAGAAATAGAACTGCCAGCGCCATCAGTGGCAAATGCATTAAGCGAACGCTCGCCTACTAAAAAACGGGCTGCggctgcagcggcagccacTGCAGTGCAGCTAACTTTGAGCCCCACCGAGAATTGTAAGTTGTTGAAAGTGGGACGCGGCGGCAAGAAGCAGGCAGCAACAGAGCCATTAGCTTTAGCGAAATCCCATGCGAAGTCAATGGCAGCCGATGGAGATTCGGATCCAGAGGGCGCTACCTTCTATATACCACTACAAGGAGCTGGCGTGGGTGGCTCTGGCGATGGTGGTATACAAGGTGTGGCTGTCAAGCTGGGTCGCGAGGGTCCCGATGGACCCAACCAAAAGGTTGTCATGCAGGCCACTCTAGTTACGAAAGCGCAAATGGATACGAACTCTAAACCGCTGCCGGACTCAATCAATACCAATGAGCTGGTCAAAACACTCCTAAATGCAGCCAACACAGATGTGAATGCTACCAACAGTGGCAAAAAATCGTTGGCTGGCTCGGCCTCTAATAGCTTAAAAGGGGCGCCAATTAGTAGTGCACAACAGCGTAAGGGAGCAGGTGAACAGGCTAGTACTTCTGCAGCCGCAGCGAATACCAGCAACAGCTTGGTGCGTGTGAACTCAAATTCTTCGCTGTTCTCTGGCTCCGTTAAATCCCGCACAGCAGCACAAGCCAGTacaacagcagctgccatAGCCAAGAAATACAAGGATGATACTCCTATAAAAATGGCCAATAATACAGCATTTCCTCGGCATGATGATCCCACTCAAATGGTAGAAGCGCCCATCTTTCGACCCACCGAAAAGGAATTTGCCGATCCCATAGAGTTTATTGAGAGAATAACTCCTTTAGCTGCGCGATTTGgcatttgtaaaattatacCGCCAGCTACTTTTAAGCCGGAATGCCGCATTTCAGATGAAATGCGTTTTACGGCCTATAATCAGTATGTGCACAAGATGCTGCACCGTTGGGGACCCAGCGCCAAGGAGCTAAGCGCCATTAAAAAGTATTTGGCCACACAAAGCATTGTGATGAATCATCCGCCTTGGATAGGGGGCATGGAGGTGGATCTACCGCGTCTCTATCATACTGTGCAAGAACTGGGCGGTCTCAAGGAGGTTATTGAAAAGAAGAAATGGGCGCGCGTTGCGGAAGAGATGTGCATCCCAAAACTGGCACAGGACCGGGTGACCAAACTGGATGATATCTATTGCAAGTACCTGCTACCCTACGATACATTATCACCAGCCGAGCGACAGAAACTATTCGATGAGGTTGAAGCTGATTGGGCCAAGCGTGAGGCGCGTGCGCGGCGCAATGCAGACCGTTTTGTTAATACGGAAAGTGTCTCCAATGAAGAGGATGATGTGTCGTCAGATGAAGATGAGGAGTCGGAGGAGGAAATTGATGGCGTATCAATGGAGTGCATTGTAAAGGGACGAAGCATGCCGTTGAGTCAGTTCTATCGCATAGCTCGTAATACCATGGCACTATGGTTCAAGAACACCGATCCCACAGTTAATGAAGTAGAAGCCGAGTTTTGGCGTCATGTAGCCGTGCGTGATAGTCATGTATGTGTTCATTCGGGTTCCATTGATTCTTCCGGTTGGGGTTATGGTTTCCCTAGTCCAGGTCCCAAGGGCAAGGGTTCAAACTATGCGCGTCATCCATGGAATCTAAAGGTATTGACTAACAATGCTAGCTCCGTGCTCCGCTCTCTAGGTCCTGTAATGGGTGTTACTGTGCCCACACTGCATGTGGGCATGCTTTTCTCCGCCTGCTGCTGGTATCGTGATCCTCATGGTCTGTCCTGGATTGAGTATTTGCATACGGGAGCCTCCAAGCTATGGTATGGTATACCTGATGATCAGAGTGCCAATTTCCGTGCAGCGCTGACCTCATTAATACCCACGCATTGTCAAAATAAGACCATTTGGTTGCCTTGTGATACAGTTATGGTCCCACCGCACATGCTAACAGATCGTGGAGTGTCACTGTGCCGTATTGAGCAAAAGCCAGGCGAATTTATTGTGGTATTTCCACGCGCATATACCTCAAGTCTGGCCACTGGCTATGTGGTATCAGAAAGCGTGTATTTCGCAACAATGTCTTGGCTGGATTTAGCCAAGGATGATTTCAGGGATATACATGAGAGCTGTGAGCCGGCCATGTTCTCGTTGGAGCAGCTGCTCTTTGCTTTGGGCTATGATCAACGCGTCAATTCGGATACATTGCATCAGATGTTGCCTATGCTGAATGAAGTGTGCGAAAAGGAGTCAGCAGCGCGCGAACAGTTGAGAGCTGCTGGCGTTACTTCCGCCGAAAAGGTGCAATCAGAGAAGAGTCAAAAGGCCAAAAAGCTGCAACTACCGCCCTATAAATCGATCGAAAGCGAATGCGATCTTTGCCGTGCAAATCTCTACATATCCATGGTGCGCACTGAGGAGGGCAATGTCTACTGTCTGCAACATGCGCTCAAAAATCTCAATAATGGCAATATACAAGCCAAGCAATGCAAACTGATCTATGCCTACAATGTGGACGATATACAGCAGCTAATACGCACGTTGCAGGAGAAGATTCAGCACAAGCAGCGTCAGGCACTGGCAGCTGTTAAGAAAAAGTAG
Protein Sequence: MVVSKDNKRRRKETETPPPPLPTSTTAAAQQSTATATAAVESSPEMPKRTKVQAQRKFAQGQSAPASSSAYGSALSVATPGPSTSTESQPPIEILPNKCPKPQDFLTFLCFRGTPALPPHLDYLNQGKSKETDTTATTSNTNNNNNSGNKKNNTNRASNKKKRGRPAKAGTKAEATSTTTVTKAAELDKATATLTKTEKVNHADKPATRPDKAASDKTTTTTTTPMPTVLPGAVRKRAEVIAEGNRRGARRSGKAVTPEQSNSVPTEAKRRSNRASTKESKPMLDGASNDEDEEDEYFSAHDASSRNGNDSKIDAAPNKIYQAAAARKSETPSKDSETGKSAGGKRGRPAAATAKKTGEALPAELPTSEKSKEKVPAPLKRVRQRESPIFIPSPESSGRMTRQRAFFEPVKVVPQQEPPDKQEDECAAEPHEETPEKRPPHNKKEAKEAARETKETKEKINSSIYAKDAAKQHLENGDKDTGSKDKKSLNVFDFSSDDEQPLAKAIKLKKGGKTSPKKAAAAAQRGRKIATDKKPIEEIKPLTLPELKVDAIPKLENDNNKGTAVKRAKAGKKKADEPAVIEQKLSPPSPKKPSSVTVARQSRKGKGKVEQDTVNKPRSPSPPMRSQRPSRKTKEAAAIYMGIIGHKLQMADDEEDDLSLSSFPDIPNVKEMEKMEKEIKKNAAQQQPGKLYLPEAMTGPTAAKNARKPSPKPTKVANSATDLPGATEAVATTTPEEKPPPPRRGRPPKQSKATTTAAAPPKREIEGMLVKKGALAKMTSSVQQSEQAKPKAKSEQSNKVDSDEEEDFLINEELNETKRKLEKSFSDSDDEPLAIKVPVKGNSIEKDELSLGQDVPKLLGTPPKQTVVQTTTNTTPTGMTSTTQLTMLPLTAKPTQFGALPLPSTSSSNSISPPSYAQPLVSTSPATATLKAMEKKSPVPTSKILNVPATYALPGSNTVLPGVTFNKTSSYLPQASPHYHTPYVRPPPTPAHQFAASSSSTVKAPPATSTSTLQQSPLKYQTPPTTYPPPIEAYQCPKINPNFLTPKYERSALPRSNNFPSPSPVARGLSSLSTPGASSATIANPALTTKSSLPPPLVPAALPVNHSSVNFSMSTTVTAATLALSTPTVTASTSAAAAAVTLATLATAVAPTPPSAHSGINVNANVSSDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTEGYFGDQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDSLRPNQSTTPPPTRDDKESTTFSSSSKNTRELGKSESAWSAKGPSLKATPVVAAPGRKEDDVKEAHELDYDKSATPVNLTQKSNAITHDAANSAPNSDKKLTATATTTLADKKAKEAAKSTTAATNIAGATTKTSSPAAKDNKTQAANKRGAGTPTPATPPPTKQNRNNKKNATAGTPSAVTAATTKNTTPTSTPTTPKRTPVYNQKAGKAQTELKQQQLQPAPSQKRGDSSVYAFGKEDEQALASAAAKPGGNRRKNVAEIELPAPSVANALSERSPTKKRAAAAAAATAVQLTLSPTENCKLLKVGRGGKKQAATEPLALAKSHAKSMAADGDSDPEGATFYIPLQGAGVGGSGDGGIQGVAVKLGREGPDGPNQKVVMQATLVTKAQMDTNSKPLPDSINTNELVKTLLNAANTDVNATNSGKKSLAGSASNSLKGAPISSAQQRKGAGEQASTSAAAANTSNSLVRVNSNSSLFSGSVKSRTAAQASTTAAAIAKKYKDDTPIKMANNTAFPRHDDPTQMVEAPIFRPTEKEFADPIEFIERITPLAARFGICKIIPPATFKPECRISDEMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEEMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPAERQKLFDEVEADWAKREARARRNADRFVNTESVSNEEDDVSSDEDEESEEEIDGVSMECIVKGRSMPLSQFYRIARNTMALWFKNTDPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSNYARHPWNLKVLTNNASSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRAALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEFIVVFPRAYTSSLATGYVVSESVYFATMSWLDLAKDDFRDIHESCEPAMFSLEQLLFALGYDQRVNSDTLHQMLPMLNEVCEKESAAREQLRAAGVTSAEKVQSEKSQKAKKLQLPPYKSIESECDLCRANLYISMVRTEEGNVYCLQHALKNLNNGNIQAKQCKLIYAYNVDDIQQLIRTLQEKIQHKQRQALAAVKKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00335651;
90% Identity: -
80% Identity: -