Ccau000397.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- osa
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000005.1:4107561-4117277[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-24 4.1e-21 75.2 0.0 3 89 497 583 495 583 0.92
Sequence Information
- Coding Sequence
- ATGGGCTCTGGTCCACCGGGGACACCAAATCCACAACAAGTAATGCGACCCACACCATCACCTACAGGCTCGTCAGGTTCACGTTCCATGTCGCCGGCAGTCGCACAAAATCATCCTATCTCGCGGCCGGCGAGCAATCAATCAAGCAGTGGCGGTCCATTGCAGCAGCCAACAATAGGTGCTGGTCCGCCACCGATGACGCCGCACGGCTTAGCCGGTGGCCcaccaccacaacaacagcagcagcaatctCAGCAACAACAGGCCCCTAATTCGGCTTCCTCGGCAAGCAATTCGCCGCAACAGACGCCACCACCGGGGCCGCCGCCAAATCAGGGGATTAATAATATGGTGACACCACCACCGCCGCAGGGTCCAGCGGGTGGTTATCCAATGCCGCCGCATATGCACGGCAGCTATAAGATGAGCGGGCCTGGACAAAGTCCAGGTGCGCAGGGATATCCACCTCAACAGCCACAGCAATATCCACAAGGCAATTATACTCCACGACCACAGTATCCACCTGCAGCTTATGCCACTggaccgccgccgccgccaacaAGTCAGGCCAGTGGTGGTGCCAACAACATGCCTCCAGGCGCACAAGTCGGTTACCCAGGCCGTCCGATGCCCAATCACAGCGGTGGCAGTCCTCATACACAGTATCCGCCCTACCAATGGGTGCCGCCATCACCACAACAAACTGTGCCAGGTGGAGCACCTGGCCAGCTTGGTAATCATGTGCAAGGCAAAGGAACTCCGCCACCTGTGGGACAACCACAACCACCGCAAGGTAGTGGTTCACCTCGTCCGATTAACTATCTGAAGCAGCATTTGCAACACAAGGGCGGCTATGGTGGCACTCCCACACCTCCACAGGGCTATGGAAATGGGCCTGCTGGCATGCATCCGGGTATGCCAATGGGTCCACCACATCATATGGGTCCTCCACATGGGCCGACGAGCATGGGTCCTCCTACGAGCACACCGCCCCAGACAATGCTGGGAGCTCCGGCTGGCAGTGATAGTGGACCGGAACATATATCACAGGATAATGGCATTAGTTCGTCGGGCGCTTCGTCAGCATCGGGTATTCATGCAGTGACATCGGTGGTCACCACCGGACCGGATGGTACGCCTATGGATGATGTTAGCCAACAGAGTACGCTCTCGAATGCATCAGCGGCATCCGGAGAGGATCCACAATGCACCACACCAAAGTCGCGCAAGAATGATCCATATGGCCAAAGTCATTTAGCGCCACCGAGCACATCACCACATCCTGGTGTAATGCACCCAGGTAGTGCTGCGCCCGGCGAAGAATATGATATGAATTCGCCGCCAAATTGGCCGCGTCCAGCTGCTAGTCCGCAGGTGTTCAACAGTCATGTCCCTGTGCAACAAGAATCATTTCGCAGCACTGTGACGACAACAAAGAAATCGGATTCACTATGCAAGTTATACGAAATGGATGATAATCCAGATAGACGTGGCTGGCTTGATAAGCTCCGCGGCTTTATGGAGGAGCGTCGCACGCCAATAACTGCCTGTCCGACCATCTCAAAACAGCCACTTGATTTATATAggttatatatttatgtaaaagaaCGTGGCGGATTCGTCGAGGTATGCAAGGTTaccaaaagcaaaacctgGAAGGATATTGCGGGACTGTTGGGTATCGGGGCTAGTAGCAGCGCTGCCTATACTCTACGCAAGCATTACACTAAGAATCTGTTGGCTTTTGAATGCCACTTTGACCGCGGTGACATAGATCCTTTGCCCATCATACAGCAGGTGGAGGCGggtagcaaaaagaaaacaacgaAGGCTGCCTCGGTCCCATCGCCAGGCTCGTCGAACTCACAGGATTCATTTCCAGCACCACCCGGTGCTCCTCCGAATACAACGATCGATGGATATGCAGCCTATCCGGGCGCGGGCCCTTATCCAGGATCTGCAGGTCCACAGCCGGATTACGGTGCGGCAGGCCAAATACAAAGGCCGCCGTCGCAAACCAATGCGCAGGCTCCTCACGCCGGCACACAAAATCAAACTGCGGTCGCTGTTCCCGGTGACAATGTAAGCGTGAGCAATCCCTTTGAGGATCCAGTTGCTGGCGGTGTGGCCGCTGgccctgttgctgctgcagctgctgccccTGGCGGCGCACCACACGGTGCTCAGCCACCGCCATCACATTCCCctcatcagcagcaacaacaacaacagggcATGGCAGCACAGTTGCCACCTCCGCCGCCacctcagcagcagcaacaatcgGGCCCACCACCACAGCAACATGGGCCGGTGCCGCCATCATCGCAACATGCTCGGCCTGGAACCACTGGAGCACCTTATCCCCAGGGTAGTTCAGGGTATCCAACGCCTGTGTCTAGAACGCCAGGATCACCCTATCCCGCACAGCCAGGTGCGTACGGCCAATATGCTTCGGGAGATCAATATAATGCTACTGGACCGCCAGGACAACCATTTGGTCAGAACCAAGGGCAATATCCGCCGCAGAACCGCAATATGTATCCTCCCTATGGGCCAGAGGGAGAAGCTCCTCCGGCCGGTGCTAATCAATATGGACCCTATGGCAATCGACCCTATAGCCAACCTCCACCAGGTGGACCCCAGCCACCTGGTCAACCAGTCACAGGTGGACCCCCAGCGACTGGTGCACCAGGAGCTCCACCTAGTGGTGCCTATGTGCCGGGCACACCCACACAGCAAGACTATTACAGGCCACCAGAACAAAGTCCACAACCGCGGCGACATCCCGACTTTGTCAAGGAATCACAGCCATATACAAATTACAATCCGCGACCACAGCTTTACGGTGCCTGGCAAGGCGGTACTCAGCAGTACCGTCCGCAATACCCTTCATCGCCAGCACCGCAAAGTTGGAGCAATGCGCCACCACGTGGTGCGGCTCCACCAGGTGGACCTCACAGTGCGCCAAATCAGCAACCCGCCGCCGTGGCTCAATGGGATCAACATCGCTATCCTCCACAGCAGGCACCGCCGCCGcctcagcaacaacaaccaccatACCAGCAGGGCAATCCGCCtggacagcaacaacagcaggcgCCACCCCAATGGACTCAAATCAATGCAGTACAAGCACAGCCGCAGCCTGGCATAGCGCCACCTGGTTCTCCACTGCGTCCGCCCGCCAGTGGTGCCGCACAACAACAGCGAATGCCAAGCGGTAGTGTGCCCATGTCgcctcagcagcagcaacaacagcaacaagctcAAACAGCACAGCCCCTAGCCGGCGTGCCCACAGCAGGAATGCCACCCGTGGCTGGAGGCATGGTAAAGCCGCCTTATGCAATGCCACCGCCATCACAATCTGGTGGTGCCCCGGCTGGCGTTCCTATGGTTAGTGGAACACCCACCGGTTTGCCACCCGGCAGCATGATACAGCAAAAACAGGCCTCAATTGTGGGCCAGGGAATTCCTGggcagccacagcagcagcctTCACCGCATCAACTGCCACTTAATCAGCCAACAACTTATGCGTCGCAACAGTCAGTTGGGCCAGGGCCAGGCCAGCTTACAAAGAAGGAACTTAACTTCCCGCACGACAGCGTTGAAGCAACCACGCCAGTGTTGTATCGACGCAAGCGCCTAACTAAAGCCGATGTATGCCCTGTCGATCCATGGCGCATTTTCATGGCCATGCGCTCTGGCTTGCTGACGGAGTGCACCTGGGCATTGGATGTTCTCAATGTACTGCTTTTCGATGATACTACGGTGCAGTTTTTTGGCATCGCTCATTTGCCAGGACTGCTGACACTTCTGTTAGAGCATTTCCAGAAGAATCTGGCGGAAATGTTTGACGAACGCTGCGAAGAGGCTTTAGACGAGCCAGACGATGATGCGGACAGCGGTACAGTGGTCACTACGCAGATGGAAAATAAAGCGCGACGAAGACCGGCTCGGTGCTTGCGCAGTATTTGCAGCTACAATCGCAGAAGGCACTACGAGAACATGGATATTAAGCGAGTCAGCGAAGCTGACGAAGACGATGATGCTGATGAGGGCATTGACTTGGGACAAGTGCGCGTACAACCGAATCCCGAGGAACGTTCACTACTACTCAACTCTACGCCAAACTATACGCTTGTGTCACGTAAGGGTGTGCCTGTACGCATACAAACGGCCGATCACGACATCTTTGTGGATGAGCGTCAGAAATCGTGGGACATCGACACAAACAAGCTGTACGAGCAGCTGGAGCCAGTGGGCTGCAATGCGTGGACATATGGTTTCACGGAACCTGATCCGCTCGATGGTATCGTTGATGTTTTTAAATCAGAGATTGTAGACATTCCATTTGCGCGTTACGTACGCAGCGATAAACAGCACATCAAGCGTGATACGgctcaaaaagtaaataacagCTCAAAATCGTTGGATGTGACTATAAAGCAGGAGGAAACCACCACTAGCAGCACAGAAGACAGCAGCCTACTTCAGCAAACTTACAATAAGAAGCGACGACTGGTCAGCGGTAGTGGAACCAGTGTCAGTGGTTCTGTGACTGCCAGCTCCAGTGATATTAAAAAGTCCAAAATTTGCGAGGAATTCGCGTTGCCTGCTGTCGAGGTGAAAAAAGAGGCAACCATTTCAACCGATAGTGACTGTCGAGCCGTCGACATGGAAATTGAGTCAccccaacagcagcaacaacatacaCAGCAACTGCGTCTTACGAATGGCGTAGCCGCTTCACCGCCCAAGGGCTTTGATCCAAAGTCAACGGTGCGAGATGCTGCCTTGGTGCTACAAAGGCGACGCGACTCAAGCTTTGAAGATGAATGTTATACGCGCGACGAGGCTTCACTGTACCTTGTGAACGAAAGTCAGGACTCGTTGGCACGTCGCTGCATTGCGCTATCGAATATCTTTCGCAATCTGACCTTTGTGCCTGGTAACGAAACAGTGCTGGCCAAGTCAACACGCTTTCTGGCCGTCCTTGGCCGACTACTGCTTCTCAACCATGAGCATTTACGCCGCACGCCTAAGACCCGCAACTACGATCGTGAAGAAGACACCGACTTTAGTGACTCCTGCAGTTCGCTTCAGGGCGAGCGCGAATGGTGGTGGGATTACTTGATCACCATACGCGAGAATATGCTGGTTTCTATGGCCAACATAGCCGGACATCTGGAGCTTTCGCGCTACGATGAGCTCATTGCGCGCCCGCTAATCGATGGCTTGCTGCACTGGGCAGTCTGTCCTAGTGCACACGGTCAAGATCCCTTTCCCTCGTGTGGTCCAAACACAGCGCTGTCACCACAGCGTTTGGCTTTAGAAGCGCTCTGCAAGCTGTGCGTAACTGATGCGAATGTTGACTTAGTTATAGCGACTCCGCCGTTCTCACGTCTGGAAAAACTGTGTGCAGTGCTAACCCGGCATCTGTGTCGCAACGAGGATCAAGTGTTGCGCGAGTTCTCGGTGAATCTGCTTCACTATTTGGCTGCGGCCGATAGTGCTATGGCGCGAACTGTGGCACTACAGTCTCCGTGCATCTCGTATTTAGTGGCGTTCATCGAACAGGCCGAACAAACAGCACTGGGCGTGGCTAATCAGCACGGAATCAACTACCTGCGTGAGAATCCCGACTCAATGGGCACCAGCCTCGATATGCTAAGGAGAGCAGCGGGCACGTTGCTTCATTTGGCCAAGCATCCGGACAATCGCTCACTGTTTATGCAACAGGAGCAGCGTTTGCTTGGCCTGGTCATGTCCCACATATTGGATCAGCAGGTAGCATTGATTATTTCGCGTGTGCTGTACCAGGTCTCCCGTGGCACAGGTCCCATGCATTCGGTCGAATACAGATTGctgcaacaacggcaacaacagcagcagcaacaacagcatagACCTTCGATAATATCCCAGTCAGATAGGTCAATGTCAGGCAGCTTGGGAAGTGTAAAAACGGAACACACCAGCATTAAGCAAGAGTGCCCAATGGTCGACACAAAAACAGCTCCTAACGCAACAGCTGTAATCAACGCTGATGAGAACAGCAATAGCAGCAGTCAGCAACTACCTCCGGCAGCAACATTCAACGATgtgagcaacagcagcaccaacagcaATAGCTGTGGAACGGCCAGCAGCAATctgagcaacagcagcagccttGGCAGCAACAGTCAGCAAGCACCTACGCTTAACAATGTTGCAGCTAGTACTACGGCTTCCGAGCAAGCCCacagcggcggcagcaacagcagcagtagtGAACAGGCACAACAGCAATTACAGTTGGGCAAAGCTGCCGCATCTTTGTCCAGCAGCAATCTAAGCAACTCCGCGTCAAGTGCAGCTGTGAATtcggttgctgctgctgctgcggcggcggcTGTAGTTGCACCAACACCGCCTGCACCACCGCCGCCAGCGAATGCGGGAACGACTGCCGCAGTTGCGTAG
- Protein Sequence
- MGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPLQQPTIGAGPPPMTPHGLAGGPPPQQQQQQSQQQQAPNSASSASNSPQQTPPPGPPPNQGINNMVTPPPPQGPAGGYPMPPHMHGSYKMSGPGQSPGAQGYPPQQPQQYPQGNYTPRPQYPPAAYATGPPPPPTSQASGGANNMPPGAQVGYPGRPMPNHSGGSPHTQYPPYQWVPPSPQQTVPGGAPGQLGNHVQGKGTPPPVGQPQPPQGSGSPRPINYLKQHLQHKGGYGGTPTPPQGYGNGPAGMHPGMPMGPPHHMGPPHGPTSMGPPTSTPPQTMLGAPAGSDSGPEHISQDNGISSSGASSASGIHAVTSVVTTGPDGTPMDDVSQQSTLSNASAASGEDPQCTTPKSRKNDPYGQSHLAPPSTSPHPGVMHPGSAAPGEEYDMNSPPNWPRPAASPQVFNSHVPVQQESFRSTVTTTKKSDSLCKLYEMDDNPDRRGWLDKLRGFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGSSNSQDSFPAPPGAPPNTTIDGYAAYPGAGPYPGSAGPQPDYGAAGQIQRPPSQTNAQAPHAGTQNQTAVAVPGDNVSVSNPFEDPVAGGVAAGPVAAAAAAPGGAPHGAQPPPSHSPHQQQQQQQGMAAQLPPPPPPQQQQQSGPPPQQHGPVPPSSQHARPGTTGAPYPQGSSGYPTPVSRTPGSPYPAQPGAYGQYASGDQYNATGPPGQPFGQNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGNRPYSQPPPGGPQPPGQPVTGGPPATGAPGAPPSGAYVPGTPTQQDYYRPPEQSPQPRRHPDFVKESQPYTNYNPRPQLYGAWQGGTQQYRPQYPSSPAPQSWSNAPPRGAAPPGGPHSAPNQQPAAVAQWDQHRYPPQQAPPPPQQQQPPYQQGNPPGQQQQQAPPQWTQINAVQAQPQPGIAPPGSPLRPPASGAAQQQRMPSGSVPMSPQQQQQQQQAQTAQPLAGVPTAGMPPVAGGMVKPPYAMPPPSQSGGAPAGVPMVSGTPTGLPPGSMIQQKQASIVGQGIPGQPQQQPSPHQLPLNQPTTYASQQSVGPGPGQLTKKELNFPHDSVEATTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDTTVQFFGIAHLPGLLTLLLEHFQKNLAEMFDERCEEALDEPDDDADSGTVVTTQMENKARRRPARCLRSICSYNRRRHYENMDIKRVSEADEDDDADEGIDLGQVRVQPNPEERSLLLNSTPNYTLVSRKGVPVRIQTADHDIFVDERQKSWDIDTNKLYEQLEPVGCNAWTYGFTEPDPLDGIVDVFKSEIVDIPFARYVRSDKQHIKRDTAQKVNNSSKSLDVTIKQEETTTSSTEDSSLLQQTYNKKRRLVSGSGTSVSGSVTASSSDIKKSKICEEFALPAVEVKKEATISTDSDCRAVDMEIESPQQQQQHTQQLRLTNGVAASPPKGFDPKSTVRDAALVLQRRRDSSFEDECYTRDEASLYLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHEHLRRTPKTRNYDREEDTDFSDSCSSLQGEREWWWDYLITIRENMLVSMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNTALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPMHSVEYRLLQQRQQQQQQQQHRPSIISQSDRSMSGSLGSVKTEHTSIKQECPMVDTKTAPNATAVINADENSNSSSQQLPPAATFNDVSNSSTNSNSCGTASSNLSNSSSLGSNSQQAPTLNNVAASTTASEQAHSGGSNSSSSEQAQQQLQLGKAAASLSSSNLSNSASSAAVNSVAAAAAAAAVVAPTPPAPPPPANAGTTAAVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_00337296;
- 80% Identity
- -