Ccau009568.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- grh
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000142.1:3337897-3383427[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.079 7.6e+02 -0.7 0.7 83 148 95 158 73 167 0.58 2 3 2 1.9e+04 -9.4 15.0 9 116 113 248 101 272 0.51 3 3 4.1e-63 3.9e-59 199.7 0.4 26 221 591 781 576 783 0.94
Sequence Information
- Coding Sequence
- ATGGATGCAACGAGCACATTCGCCATATCCTATACGGACTGGATGGCCGAGTCACGACGGAGCGCCAGCTACAGCCTGGCCGAGGCTTCTCTGCCCAATCCCGATTCACCGCATTTGCAAGATGCTGCACAGTCTCACTATGCCACGGGCACACACTCGCCGCCACGTTACTATGAGCACCACAAGGATGAGCTGCAGCAAGCCGCACCAGCAcaacagcatcagcagcatATGCAACACTTGCCACTGACCGCCGCTGGCTTAATGCAGGCGGTGGCCGCCGAGATACAGCTAAGTGAGCAggagcaccagcagcagcagcagcatcaccAACAGCACCATGATCATCAGCAGCCACATGAATTGCAGCTTGTACCGCCAACATCCCAATCCAGTGGTTATAGTGTCTATAGCTATTACAAAGATGCTGAGAAAGAGAACAATAATGAAGAGCTGATTTGGAGcgCCACAAATGCCAGCAAGCTCAATGGCCAGACCACACCTATCGATGTCTCTGGCCTATcgcaaaatgaaattcaagGCTTTCTACTTGGTTCACACCCATCATCTTCAGCGTCGGCCACAACGCAGGTCGTCTCAACGACAACAATCTCACATCAGcaacaccagcagcaacagcagcagcagcagcagcaacaacagcagcaacaacaacaacaacaacatggtACCGCCATTGTTACAGCTGCAGGCGTAGGCAGCGCAGGCTCCATAGTGACGGCAGcgatacaacaacagcaacaacaacaacaacagcagcagcagcaacatcagctAATTAGCATCAAACGCGAGCCTGAAGATCTGCGCAAGGATCCCAAGAATGGCAATCTTGGCGCGGGGAACGGTTCGGTCATAACGCAAAAGATTTTGGACGCAGATGCAGccaacacaacagcaacaacaacaagcacaaacaACCAAGCAACGAAGccaacattaacaacaacaatagaaatTAGTGCTAATCAATCAGCCGCGAGTCCCGCAACAGAACTAGAGATGTATGCTACTACCGGCGGCACACAGATTTATCTACAGACCACACATTCGGCAACGAGCAGCGCGGGCACAGCACAAAGCACACTACAAACACAGAGTCCCAGTCCGGGCCCGTACATAACATCCGACAATTATGGCATGTACACAACCTCAAGGCTGCCACCGGGACCGCCCAGCACCACATTCATAACGGAGCCATACTATAGAGAGTACTTTGCGCCCGATGGTCAGGGTGGCTATGTGCCCACAACGCGCAGCATTTATGGCGAGGATCAGGGCAGCGTCGGCTATGAGGGACGTTTCAGCACAACAGCGCCTACAGTGCTGACCACAAGCGGCTTGCCAACGAATCATCAGACCGGaccgccaccgccaccaccaACGCAAGCGCTTAAAAACGGCGGCACACCGCTCTACACTAAGACCATAACCGCAGCGGGTTTGACGGTGGATTTGCCCAGTCCCGATTCGGGCATTGGCACGGATGCCATAACGCCGCGGGATCAAAACCATATACAACAGTCCTTCGATTATACGGAGCTGTGTCAGCCGGGCACGCTGATTGATGCAAATGGCACCATACCCGTGTCCGTGAATAATATACAGCGCACTGTGGTGCATGGCAGTCAACAAAGTCCAACCACCTCGCTGGTGGATACAAGCACAAATGGCTCGACACGTTCGAGACCCTGGCATGATTTTGGACGTCAAAATGATGCcgataaaatacaaataccaaaaatCTTCACAAGTGTGGGCTTTCGTTATAACCTGGAGAGCCCTATCAGCTCATCGCAGCGTCGCGAGGACGATCGCATCACCTACATTAACAAAGGACAGTTCTATGGCATTACGCTGGAGTATGTGCATGATGCGGATAAGCCAATTAAGAATACAACAGTTAAGAGTGTGATCATGTTAATGTTTCGTGAGGAGAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGATACAAAGAACTCGGTTGGCCTTGTTGGTTGCATTGAGGAAGTGTCTCACAATGCCATTGCCGTGTATTGGAATCCACTGGAGAGTTCGGCAAAGATCAACATTGCAGTTCAATGCCTGAGCACGGATTTCAGCAGTCAAAAGGGTGTTAAGGGTTTGCCGTTACACGTACAAATCGATACATTTGAGGATCCCAGAGATGCTACAGTCTTTCATCGTGGCTACTGTCAAATAAAAGTCTTCTGCGATAAGGGAGCCGAACGCAAGACACGCGACGAGGAGCGCCGTGCGGCCAAACGTAAGATGACAGCCACAGGACGCAAGAAACTGGATGAGCTCTATCATCCTGTAACAGATCGTTCGGAATTCTATGGCATGCAGGATCTGGCCAAGCCACCGGTGCTCTTTTCACCCGCCGACGATATGGACAAGAGCTTCTATGGCCATGAGACTGACTCGCCAGACCTTAAGGGCGCTTCACCATTTCTGCTGCACGGTCAAAAGGTTGCCACACCAACGCTCAAATTTCACAATCATTTTCCGCCCGACATGCAGACTGATAAAAAGGATCACATATTGGAGCAAACCATGTTGGGCTCCGCCGGTATGGCTGATTTTGGACCACCCATGAAACGTGGTCGCATTACACCGCCCACCACAGAGCGCGTCATGCTGTATGTGCGGCAGGAGAACGAGGAGGTATATACGCCGCTGCATGTGGTGCCTCCAACCACCATAGGCCTGCTCAATGCGattgaaaacaaatacaaaatctCAACAACGagcataaataacatttatcGCACAAATAAGAAGGGGATTACTGCGAAAATTGATGATGATATGATCAGCTATTACTGCAATGAGGATATTTTCTTGCTGGAGGTGCAGCAAATCGAGGATGATTTGTATGACGTCACGCTGACGGAGCTGCCCAACCAGTGA
- Protein Sequence
- MDATSTFAISYTDWMAESRRSASYSLAEASLPNPDSPHLQDAAQSHYATGTHSPPRYYEHHKDELQQAAPAQQHQQHMQHLPLTAAGLMQAVAAEIQLSEQEHQQQQQHHQQHHDHQQPHELQLVPPTSQSSGYSVYSYYKDAEKENNNEELIWSATNASKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSASATTQVVSTTTISHQQHQQQQQQQQQQQQQQQQQQQHGTAIVTAAGVGSAGSIVTAAIQQQQQQQQQQQQQHQLISIKREPEDLRKDPKNGNLGAGNGSVITQKILDADAANTTATTTSTNNQATKPTLTTTIEISANQSAASPATELEMYATTGGTQIYLQTTHSATSSAGTAQSTLQTQSPSPGPYITSDNYGMYTTSRLPPGPPSTTFITEPYYREYFAPDGQGGYVPTTRSIYGEDQGSVGYEGRFSTTAPTVLTTSGLPTNHQTGPPPPPPTQALKNGGTPLYTKTITAAGLTVDLPSPDSGIGTDAITPRDQNHIQQSFDYTELCQPGTLIDANGTIPVSVNNIQRTVVHGSQQSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKIFTSVGFRYNLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPADDMDKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILEQTMLGSAGMADFGPPMKRGRITPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338092;
- 90% Identity
- iTF_00338092;
- 80% Identity
- -