Ccau009729.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- Xbp1
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000142.1:4531229-4532241[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.7e-14 7.3e-11 42.0 23.3 2 64 85 168 85 169 0.89
Sequence Information
- Coding Sequence
- atggcaCCACCAGCAAACACGGTTATAATAACAATGCCCAAGTGCGTGGCATTGACAGGCAATACGTTGCCAAAACTGCGCCCAGctccagcagcagcgctgctcaAGGGCTTGGGCGCAGCTTCGCCGGCATCAAGTTCTGGCTATGCTTCGTCAACCAACAGCGTCGTAGACGATGACTGTGTCGATATGGACATGCCCACAACGACaccaacaaaagccaaaaagcgTCGTTTGGACCATCTCACCTGGGAGGAGAAGGTGCAAAGAAAGAAGCTAAAGAATCGCGTAGCCGCACAAACATCCCGAGACCGCAAAAAGGCACGCATGGAAGAAATGgaatatgaaataaaagagTTGACAGACAAAACAGAAATACTACAAAACAAATGTGAGAGCCTGCAAGCCATCAATGACTCACTGCttaccaaaaatcaaaaactcgACACGGAATTAGAACTATTGCGCCAAGAACTCGCtgaattaaaacaaaacaaccaGCATCACAGCAGCATTAGCAGCAGCAATGCCGCCAACGCAAGCGCTGATGGCTGTGCGTCCATACTCACTGGATCAGCAGTATCCAATACTGACCCTCAGCAGCAGGGTACAATGGACACACAGTCGTCAGCCTTTGCCTTGACGACAAAGCAtctgcaacagcagctgaaAAAGAGCAGCACAGCAGCCTCGCTCTGGAGAATTGTGGCGCTTTGCCTTCTCTACAAGACATGCTGCTCGTCGACGATGAAGAGTTCGATGCCCGGCGACTTGAAGAGCTGGCCGAAAGTCTGCTCGCAGATATCACAGCAGACCTGGAAACAGGCGCTAGAGCATGCAGCGAAGCTGCTGCCGAAGATGCAGGCAGCTCAGAGCGATTGTCTGGATCAGTGGTGGGGACCACAGCAGAGTGCGTGGAATCCAACGGGCATAAAGCTGATGGCCTAA
- Protein Sequence
- MAPPANTVIITMPKCVALTGNTLPKLRPAPAAALLKGLGAASPASSSGYASSTNSVVDDDCVDMDMPTTTPTKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEYEIKELTDKTEILQNKCESLQAINDSLLTKNQKLDTELELLRQELAELKQNNQHHSSISSSNAANASADGCASILTGSAVSNTDPQQQGTMDTQSSAFALTTKHLQQQLKKSSTAASLWRIVALCLLYKTCCSSTMKSSMPGDLKSWPKVCSQISQQTWKQALEHAAKLLPKMQAAQSDCLDQWWGPQQSAWNPTGIKLMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338889;
- 90% Identity
- -
- 80% Identity
- -