Ccau015220.1
Basic Information
- Insect
- Chymomyza caudatula
- Gene Symbol
- Jra
- Assembly
- GCA_035041775.1
- Location
- JAWNKW010000197.1:2426648-2427568[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6e-18 5.7e-15 55.2 9.7 2 65 204 267 203 267 0.96
Sequence Information
- Coding Sequence
- atgaaaacagCCGTATCTGCAGTTTCTGTCAACACTTCCAGCGCTACTCCTACACCAATAGTACCCAAAACTGAGCCAGTTGGAACAGACGAAACGTCCATGGAATTTCAAACACCAAACAGCTGCTCAACACCGAACGTTAACAAGCGACCAGCCTTTTTGGACCTTAACAAGTcatcgaaaaacaaaagagttgTTGCCCCATTACTTATTGATTCGCCAGACTTGCAAGGAAAGGTTTTAAATACTCCAGATCTAGAAAAAATTCTACTGTCTAGTAATCTGTTACAAACACCACAACCGGGCACAGTATTTGCTACCAAAGTAGGAACGGTGACATCTGAACAGGAAGAATTTGGAAAAGGATTTGAGGAGGCACTCCAAAGTCTGCGCACTAGTAAAACTTCGCAAGAGTGCCTCGGAAACAACGTAAACAGTAGGGCTGCTAGCAATCCAAACGTAACCACCAGTATGACAGCCGTCAATAATGGTATAAGTGGCGGTACTTTTACTTACACCAATATAGAGGGTTTCCCAGTTATCAAAGACGAACCTCAAAATACTGCTGCCTCACCTACAGTCAGCCCGATTGACATGGAAACGCAGGAAAAGATTAAATTGGAGCGCAAAAGGCAACGCAATCGCGTAGCCGCTTCCAAGTGCCGCAAGCGCAAGCTGGAGCGCATATCGAAATTGGAAGATCGCGTCAAAGTGCTTAAAGGTGAGAATTCCGATTTGGCAGGCATTGTCAAGAATCTTAAGGAACATGTGGCACAGCTGAAGCAACAGGTCATCGAGCATATGGAAGCGGGATGCACCGTACAGGCCATTCCCAATGTGGCGTTACTTTCGGGCAAATAA
- Protein Sequence
- MKTAVSAVSVNTSSATPTPIVPKTEPVGTDETSMEFQTPNSCSTPNVNKRPAFLDLNKSSKNKRVVAPLLIDSPDLQGKVLNTPDLEKILLSSNLLQTPQPGTVFATKVGTVTSEQEEFGKGFEEALQSLRTSKTSQECLGNNVNSRAASNPNVTTSMTAVNNGISGGTFTYTNIEGFPVIKDEPQNTAASPTVSPIDMETQEKIKLERKRQRNRVAASKCRKRKLERISKLEDRVKVLKGENSDLAGIVKNLKEHVAQLKQQVIEHMEAGCTVQAIPNVALLSGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338885;
- 90% Identity
- -
- 80% Identity
- -