Camo000114.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- srp
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010000025.1:105955-119437[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.3 1.2e+04 -3.5 0.0 8 25 65 81 64 81 0.76 2 2 8.8e-18 2.4e-14 53.1 2.7 1 35 774 807 774 808 0.97
Sequence Information
- Coding Sequence
- ATGACCAAAACAAGTAAAGTAAATGATAAAGACAAAAACGCGAGTTTGCCGCGACCAGCGCCAAATTTACTGGCCAATGctgtgaaaatgaaaataacaaaaGCCTTGTCAAATAACAAATTACAACACATTAAATCTGAAGGACAACAAAATACAGTTCCCAGATTGGATAATGGTTTGATGGACTCTGCGAAAACGGCATCTTTAATTGAACAAACCTCAGGATCAAGTGAATGCAACCAACCGCAACAAGCAGTTGCACAGGCAACGAAAGAGACGGCAACAAACACTACAGCAGACTGCAATTGTGgtgacaacgacgacgacaacgacgacgacgacgacgaaagCGACGAAAAATTAAAGGCACACTCATCAGTTCTCAGCGAGACAGCAAACCAAAAGGTTACTACAGTTGTCAGCGCAGGCGCGTTAAGAGTTTCTGACACAGCagtaacagcaacagcaacaacttcgGCTTCGTTATCGTTAAATGACAGCACAAAAGATTTCCAAACAACAAAAGTTGCACCGGTAGTtgtgataaataataataaacaccAAAACAACTcgccaaataataataacagtgAGTGTGTTGACAAAATCAAAACAAACTATGCAcatcaacaacaccaacaacataaccagcagcagcagcagcagcaacagcaacaacaacagcatcaacatcatcaacatcatcaacatcatcatcatcataatcatcatcaacaacaacaacaacaacagcaacaagcagATGAACAATTCCAAATCTACGATCAACAATATTTACAGCGACAACATTTACAACAGGATCTccaaacgcaacaacaacagcaacagcaatcaCAACAACAGCATGCTAACTGGCTAGTCTATAACAGTCCATACGATCTAACTCTGACACACTTAACCTATCCTCACGGAATTTACGACAGTACGACAGATACCATAATGCGAAACAATTTTACACTATACAGTGCTTATGGAGGCGGTGGTGGGGGCGCTGGCGCCACGCCCACCTCTCTTGCACACGATCAAATGCAGCACCATATTGTGGCCATCAATGGGGCAGTGAATTCTGTAATGGCAGACTCACATAGTGCTCATACGCCGCCCAATATTGATGAGGTTATACAGGATACTCTTAAAGACGAATGCTATGAGGACAATCACCCATCTAGCTATCATATGCTCACTTCGGTAGCGGATTTGCATGCACTCAAAGATACCAACGTTACAATCTACCCCATCTCGCATGAACAtttgttacaacaacaacacaatagTTCCACCAACACGATTGTCGATGAATCCCCATCGCCGCAAGACAGCAGTGTAACCAGAATGCAGATCACACAACTTAACAGCGCACCGCCTTGCAGTTCTCTGCATCGGGATAGCTTTGCCAACTTGACACCAGAACACGCCACCTATTTTCCATCTCCATTGAGCCCAGCGCTTCAAAGCAGCTCCGTTTATGCAGGGCCGCTCCTTTCATCGGCGGCAAACGGCATGCAATATGGGTTGCAATCTCCAGCATCGCCCATTCACTCACATGCACAGCTCCAGCATCATCACCATCATAATCATCAGGAGCACCAACATCATCGTCAACATCACCAACAAAATTCAACCTCGAATAGTCCCGGTCCAAGCAATGGACAAAGCGCGCTAGTCAGCTTGGACAACGATTACGGCTCCCCGAAGAGTGGCCACAGTAGTGGCGGAACCTTGCCAGCTTTTCAGCGTATCGCCTCGGTTAGCGTTGCCTCAGGGTACGGTAGTGGTGGCAACGGCGTTGCAAATGGTATTTGCAGTAGTGCCGAACGCTCTGCGTACGCATCAATGACAAATTATCGTGCACATGGTGACGCTTGGTCCGCCAATTATGAGCCAATTAGCTACGCAACAAACACATCAGGCCAGAGCCAGTTAGGTGGTGTTGGATGTATGGCCACCGGATCTGCTACAAACGTAATACGCAAAGGCCAAGCCATATCTGCTGGAGCAACGAGCTGTGGGGATAGTAGTGGTGCGGGTGCAAGTTCGGCCGAATCTGCCAGATTTTTGTCCGCGTCGGCTTCGCTAACAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGAACCACCCATATAATGTGACCGGCGGTAGCCGTAGTAAAGGCTCAGCAAATGCAAACAGTGCCGCAGGCGCGGCTGCAACGGCCGCAGGTGAAACTTCGTCGACGCCAACCACTACGCTCGACGAGCATGTTAGTCGCGCCAATTCGAGACGCTTGAGTGCCTCAAGACGCGCCGGGTTGTCCTGCTCAAACTGTTTGACTAACTACACTTCGCTGTGGCGCCGCAATCCCAGCGGTGAGCCTGTTTGCAATGCCTGCGGCCTTTACTTTAAATTACATAATGTGGCACGTCCATTGACCATGAAAAAGGACACTATACAGAAACGAAAACGTAAACCAAGGGGTACAAAGagtgaaaaatcaaaaaaaggaCAATCTAGCCAATCTGCAAGTTCTTGTCAAGCTATTGCAATGGTGAACATGGACATCAATATGAACGATGCCAATGATGAAACGAAACAAATTACATACATGACAttccaacaacaaccacaagcacaacagcaacatcaCCAGCCACAACAACATAACGCTAGCATACTAAATAGCAATGAACGTTCACCAGCCGGAGTCAGCTCCAGCTCTCCACTGACACCAAACAGCATGAAATCCTCATTGTCGCCCCAAAACCAACATCAGCCACAACATCAgcaacatcaacatcaacaagagcaacaacaaacccAAACGGGCGTTGCCCATTGCTTGGATATTTCGCCACCCTCATTGCTACTTCATCACCAACAACAGAATAACTACCAACTATCATCCATAAACATGCAGCAACAATGCAATAGCATGCAACATTCTTCACCCTCAAGCAaacaaacatcaacaacaatcacaacgacGACAACAGAAACAGAAGCAACACCAATGAAACAATCAATATATTCTACCTCCTCGCCATCGCCAACCCAAATGCATAACTCCATTTTGTTTGAAAGCAACTctcataacaacaacaacagtcatcatcatcatcatcataataacaacaacaacaacaacaacaacaatgagatcaatgaaaataataacaagTTTATACAGAAATATCTACAAGTTCAACAATTGAACCACTCAAACGAGTTGCAGCACCAACAGCACCagcttcaacaacaacagcaagcacATCATCAGTTATTGACTCAACATCAAATTATAAACCTAATTCCGAATTCGCTTTCGgtagcagcggcagcaacagcagcctcCACCTTGTCCACAGCGAGGAGCAGTtcgagcaacagcagcagcaccaaaTCGGAAGCtataacaacaacgataacaacagcggcagcagcagcatcgcAACCACTGACCACACCATTGAGCGCCAGCTCATCACCTCTGATCATCACCAAAAGCATTcaacaccaccaccaccaccacaacagcaacaacaatattagTCAGCAAACTTCCTATACACCACAGCAGCAAACACTAGATGGGCAAGTGACGACCTTGCCTAAAAATTCGCTTGAAATGAGTATGAGATCGACTTATTTCTTAGGACAAATACCCCATGAAGCTTCAGCACAGTCGGCAATTATTAAATTGGAACGTATGGATCATCatgagcaacagcaacagcaacagcaacaccagCATGATGAAATGTTGCTAAGCCGATCGGAATCTCTTGACGAGCATTATGGTTTTGGACATGAACAGCTCAACGCAGAGAAATTTACTATGCACGCCGTAGCTCAGCAGCATTTGCAGGAGTTCGAGCGAAGATTTGGAGTTGATCGGGAGACGGTTGTTAAAATGGAGTGA
- Protein Sequence
- MTKTSKVNDKDKNASLPRPAPNLLANAVKMKITKALSNNKLQHIKSEGQQNTVPRLDNGLMDSAKTASLIEQTSGSSECNQPQQAVAQATKETATNTTADCNCGDNDDDNDDDDDESDEKLKAHSSVLSETANQKVTTVVSAGALRVSDTAVTATATTSASLSLNDSTKDFQTTKVAPVVVINNNKHQNNSPNNNNSECVDKIKTNYAHQQHQQHNQQQQQQQQQQQQHQHHQHHQHHHHHNHHQQQQQQQQQADEQFQIYDQQYLQRQHLQQDLQTQQQQQQQSQQQHANWLVYNSPYDLTLTHLTYPHGIYDSTTDTIMRNNFTLYSAYGGGGGGAGATPTSLAHDQMQHHIVAINGAVNSVMADSHSAHTPPNIDEVIQDTLKDECYEDNHPSSYHMLTSVADLHALKDTNVTIYPISHEHLLQQQHNSSTNTIVDESPSPQDSSVTRMQITQLNSAPPCSSLHRDSFANLTPEHATYFPSPLSPALQSSSVYAGPLLSSAANGMQYGLQSPASPIHSHAQLQHHHHHNHQEHQHHRQHHQQNSTSNSPGPSNGQSALVSLDNDYGSPKSGHSSGGTLPAFQRIASVSVASGYGSGGNGVANGICSSAERSAYASMTNYRAHGDAWSANYEPISYATNTSGQSQLGGVGCMATGSATNVIRKGQAISAGATSCGDSSGAGASSAESARFLSASASLTAMAAESGGDFYKNHPYNVTGGSRSKGSANANSAAGAAATAAGETSSTPTTTLDEHVSRANSRRLSASRRAGLSCSNCLTNYTSLWRRNPSGEPVCNACGLYFKLHNVARPLTMKKDTIQKRKRKPRGTKSEKSKKGQSSQSASSCQAIAMVNMDINMNDANDETKQITYMTFQQQPQAQQQHHQPQQHNASILNSNERSPAGVSSSSPLTPNSMKSSLSPQNQHQPQHQQHQHQQEQQQTQTGVAHCLDISPPSLLLHHQQQNNYQLSSINMQQQCNSMQHSSPSSKQTSTTITTTTTETEATPMKQSIYSTSSPSPTQMHNSILFESNSHNNNNSHHHHHHNNNNNNNNNNEINENNNKFIQKYLQVQQLNHSNELQHQQHQLQQQQQAHHQLLTQHQIINLIPNSLSVAAAATAASTLSTARSSSSNSSSTKSEAITTTITTAAAAASQPLTTPLSASSSPLIITKSIQHHHHHHNSNNNISQQTSYTPQQQTLDGQVTTLPKNSLEMSMRSTYFLGQIPHEASAQSAIIKLERMDHHEQQQQQQQHQHDEMLLSRSESLDEHYGFGHEQLNAEKFTMHAVAQQHLQEFERRFGVDRETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338800;
- 90% Identity
- iTF_00338800;
- 80% Identity
- -