Camo015488.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- Cdc5l
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010003333.1:56479-59110[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.3e-17 5.3e-14 52.5 1.8 2 46 9 54 8 54 0.97 2 3 5e-12 6.1e-09 36.3 0.1 1 45 60 103 60 104 0.93 3 3 7.7 9.5e+03 -2.7 0.8 6 18 498 510 498 510 0.89
Sequence Information
- Coding Sequence
- ATGCCTCGAATTATGATAAAAGGTGGCGTTTGGCGAAACACTGAGGATGAAATTCTAAAAGCGGCTGTAATGAAATATGGCAAGAATCAATGGAGTCGCATAGCTTCATTGCTGCATCGAAAGTCAGCTAAACAATGCAAGGCGCGTTGGTATGAATGGCTAGATCCCAGCATTAAAAAAACGGAATGGTCGCGTGAGGAGGACGAGAAGCTACTACATTTGGCAAAGCTTATGCCCACTCAGTGGCGTACAATCGCGCCAATTATTGGTCGCACGGCTGCGCAGTGCTTGGAGCGATATGAATATTTGCTcgATCAAGCGCAGCGCAAGGAAGATGGCGATGACACAATGGACGACCCGCGTAAATTAAAGCCGGGGGAAATTGATCccaatcccgaaacaaagcctGCGCGCCCGGATCCAAAAGACATGGATGAGGATGAGCTAGAAATGCTATCAGAGGCGCGTGCTCGTCTAGCTAACACGCAAGGCAAAAAAGCTAAACGGAAGGCACGTGAAAAACAGTTGGAAGAAGCGCGTCGTTTGGCCACTTTACAAAAACGACGCGAATTGCGAGCTGCAGGTATCGGTAGTGGAAACCGCAAGCGCATTAAAGGCATTGACTATAATGCCGAGATTCCGTTTGAAAAGCGCCCAGCACTAGGATTTTATGACACTTCTGAGGAAAGTATTCAAAAGATTGAacctgattttaataaaatgcgaCAGCAGGACTTGGATGGCGAACTACGCTCCGAAAAAGAAGAGCGCGAACGcaaaaaagacaaacaaaaactaaagcaGCGCAAAGAAGATGAGGTTCCAACCGCCATGCTGCAGAACCAGGAGCCGGAGCGCAAACGATCAAAGCTGGTGTTACCTACACCACAGATTTCTGACATGGAACTACAGCAAGTGGTCAAACTTGGAAGGGCCAGCGAAATGGCCAAAGACATAGCAGGCGAAAGTGGCATTGAAACAACTGATTCACTTTTAGCAGACTACTCAATCACACCTCATGTGGCTTCGACACCTCGCACACCAGCAGTGTATACAGATAGAATAATGCAGGAGGCTCAAAACATAATGGCGCTCACCCACACTGAAACTCCATTAAAAGGGGGACTAAATACGCCCCTGCACGAATCGGACTTTTCTGGAGTACTTCCAAAAGGAGTCGCCACTCCTACGCCCAACACAGTTATTGCAACACCTTTTCGTAGCCAACGTGGCGCCGGTGAGGCGACTACCCCAGGCATTTTTTTAACGCCTTCCTCAGGAGCTTTAGTACCTGTTGGCAAAGGTGGTGGAAGCGATGCGCCTACTCCGGCACTAGTTCGAGATAAACTGAGCATTAATTCCGAAGAAAGCATTAGCGTTGCTGGGACGTTGACAATTGGAAAGAGCTACCAGAAGCAGTTAAAATCGACGCTACGAGAGGGATTGGCCACACTGCCAGCTCCAAGAAACGATTATGAGATTGTGGTTCCTGAGCAAGAAGACAGTGATCTTTTGGAGTTGGTTCAAGAACCAACAGTCGAGGACCAGGCCGATGTAGACGCGCGGCTGCTAGACGAACAAGCGGCACAACGCAAACAAGCTCTGGAAAAAAGATCTCAAGTTATACAGCGTGGTCTCCCGCGACCCACTGAAgtcaatacaaaaatattgcgCCCCCAATCGGAAAAACAAAATCTTACAGAACAACAGCAAGCCGAAGAATTAATTAAGCATGAGATGATAACTATGCTGCTATATGACTCCGTTAGAGATCCTGTTCCTGGGCAATCACAGCACAAAATAGACCAGTTGCATAGCTACTTTAAAGCTAATCCCTATGAGGAAATGTCAAAGCAAGATCTGGCAAAGGCCAACGAAATGTTGATTGACGAAATGGAAACCGTTAAGGAAGGCATGTCGCACGGCGAGCTTGCGCTTGAAGTTTACGCACAAGTGTGGCAGGAATGTCTTGGCCAGGTTCTATACTTGCCGTCTCAGCATCGTTATACGCGTGCAAACTTGGCCAGCAAAAAGGACCGTTTAGAGTCAGCTGAGAAGCGCTTAGAGCAGAACCGCCGCCACATGGCGAAGGAAGCCAAACGATGCGGAAAGATagagaaaaaacttaaaattctcACGGGTGGCTATCAAGCTCGAGCGCAAGCTTTTATAAAACACATACAGGATACGTATACACAGATCGAGCAAAACACGCTCTCGCTTTCTTCATTCCAATTTCTTGGTGAGCAAGAGGTAATTGCTGTACCCCGTCGCCTTGAGTCTCTTCAAGAAGATGTGCGCCGCCAAATGGAGCGAGAAAAGGAGTTGCAGCAAAAATATGCTACCTGGGTTGAAGAACGTGACTTACTTGCCACAGAGATTGAGAAAATAACTGGATCAAAACCAACATTGGAAAACATAGTTTCCGAAAATCGCGACTTAGTGAATTAA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEDGDDTMDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLATLQKRRELRAAGIGSGNRKRIKGIDYNAEIPFEKRPALGFYDTSEESIQKIEPDFNKMRQQDLDGELRSEKEERERKKDKQKLKQRKEDEVPTAMLQNQEPERKRSKLVLPTPQISDMELQQVVKLGRASEMAKDIAGESGIETTDSLLADYSITPHVASTPRTPAVYTDRIMQEAQNIMALTHTETPLKGGLNTPLHESDFSGVLPKGVATPTPNTVIATPFRSQRGAGEATTPGIFLTPSSGALVPVGKGGGSDAPTPALVRDKLSINSEESISVAGTLTIGKSYQKQLKSTLREGLATLPAPRNDYEIVVPEQEDSDLLELVQEPTVEDQADVDARLLDEQAAQRKQALEKRSQVIQRGLPRPTEVNTKILRPQSEKQNLTEQQQAEELIKHEMITMLLYDSVRDPVPGQSQHKIDQLHSYFKANPYEEMSKQDLAKANEMLIDEMETVKEGMSHGELALEVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLEQNRRHMAKEAKRCGKIEKKLKILTGGYQARAQAFIKHIQDTYTQIEQNTLSLSSFQFLGEQEVIAVPRRLESLQEDVRRQMEREKELQQKYATWVEERDLLATEIEKITGSKPTLENIVSENRDLVN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00679419;
- 90% Identity
- iTF_00339075;
- 80% Identity
- -