Camo002368.2
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- -
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010000598.1:66535-69108[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 1.1e-10 1.4e-07 32.0 0.0 1 45 231 276 231 277 0.96 2 6 4.5e-08 5.5e-05 23.6 0.0 3 44 286 331 284 333 0.90 3 6 6.4e-06 0.0079 16.7 0.0 1 46 339 385 339 385 0.90 4 6 5.7e-10 7e-07 29.7 0.0 3 44 393 435 391 436 0.95 5 6 2.6 3.1e+03 -1.2 0.0 33 43 465 475 457 476 0.72 6 6 1.3e-08 1.6e-05 25.3 0.0 2 44 503 546 502 548 0.94
Sequence Information
- Coding Sequence
- ATGGCAACGAGTAGTTTTGAACAGCTAAAGGAGCTAATTCAGCAGCAGCTGATGGAAATCGACAAAGCATTGGAGGTAACCACAGGTGTAGCAAGCGCTGCCAGCGCCTTACATATTAACCAATCGCTCCAGCGTAATTTGGAGCGATCCTACAAAAACGTATTGCAGCTATTAAAAACGGTTCGAGCGCGCTATGGGCTCAATAATGAAATTATTGAGCAGCGTCAATGTGTTTCACGTGCCAAAGCCGATGAAAGAATCTCAAAAACCGGCGCTTGGCTGAACGGTGGTAGCTATAGATTCAAGGGGAATCTTTATTTTCGCGATGCGTCTGGACGCAGTTGTCCCAATAATGATGACTATGAGCGGCGGAGCCATTCAGAAATGTTCCCAACAGATTTTGATATGCGTTCGAAACATGTGTGGACAATGTTTGACAAGAAAAATGTCGTTATGGGTGTCAAACAGCAGCTTTTAGATCACGTCAATTTAAAGCTACAATCTCAACCCAAGTCTCGTAAAAGAAATGCGATAGATCTGCATACAAAGACCTTGGCGAGTTTGTTGGCTTCTGTTGACAGCAGCTTCCATATAGATTGGCAGCAACTTAGTTCTGTGGAGATTCAAAGTCGTCATTCGCCTTATAGTTGCGAAGCTATGTGGGAGGTCTATCTACATCCACGCATAAACCGCAACGCATGGACTCACGATGAGGATACAACATTGTTAGCTATGGCTAAAAGCTATAACTTTCAAGACTGGGGAGCGATTGCCCAGGCAGTAGGTCAACGGTCGGATTATCAATGTTTTGTAAGATTCCAGACAACATTGCGTTATCAAATCGGGTCAGCATCCAAGTGGAGCAAGCAAGAAGATGATCGCTTGAAGTCTGTTGTGCTTCAAAATACCACAAATAGCATCGTTGATTGGAAGAGCGTTATGCAATATTTTCCAGACAAAACCAAGTCATCCGTAATTGGccgttatacatatgtacttcaTCCAAGCATCAGTCGTGATCCATTTACCGTGACGGAGGACATGAGACTTTTTGCCGCAGTGAAAAAGTTTGATGGAAAATTCTATAACTTTCCACGTGATCTATTTCCCAATCGTTCATTAAGCCAATTACGCATGCGTTATTATAATGTTTTGGCACAGCGTGATAAGACTGATTCATGGTCTGTAGCGGATGACAGAAAGCTAATCGAATTTGTCACCAATCACGGAAAAAAAGATTGGGTGGGCTGCGCCAGCTTTTTAGGAAACCATACGCGCACCAGTTGCCGCACAAGATTTACAACTATTACACGATATATTGAGCAAAACCCCGGTGCAGACTTGGACGACTTACCAAGGCGGCAAAAATTAAAGCATGCACCAGTTACGGAAAAAAACTATTCGCAATGCATTGAAAAATGGCAGGAGGATCCAAGCTCTTTGGAATTTGAAGAAGAATCGAAAAATTTGACTACTATTAAAAAAGCACTTGCTTTAGAGACTCAAGAGCCGTGGTCGCTGCGAGACGACACAATGCTCATGGAATTTGTCGCAACCAATGGCACACTTGAATGGGCTAAGTGCGCCATCCATGTAGGAAATAAGACAAAAGACAACTGTCGTTCAAGATATTACTATATTAAACGTTTTCTGATCAAAAATCCCCATGCAAATGTTGAAGAATTTCCAaggaaaagcacaaaaaaaattgttacatttACTGGTCAAAATAAACAGGCCTATCAGTACTTTAAATATGCCTACAATTTGCAATTGGGCCAGAATTATACGCCTGAATTTGCTATGCCCAGCAACGATTTAAATCTACGTTTGGCCGTGCAGGCCTTGAGACCACAACTAGCTGCCAATCTGGAAAACTTAGTAGAAATCCCTGTGCTGCCCAGTCAAATGTGCCAAGTCTATAGTCAAATGTTAAACCCATTGCCGCCAGTTGATAACCAACCTTATCTACTGCCTCCCAATTGGTCCACATTAATGGGCTTCCGCGCCTTATGTATCTTGCCTCCAGATCTTCGCAATGGGAAAAAGCAAGAAATACTGCGTTATGACACATCATCTGCTGCAGTGCAAATATTTCGTCAGCGTCTGCGTGCCCTTTTCTTTCGCACCACTTTGTTGAGCCGCCTGGATCCGGACCTGATTGATAATTTGAGAGACGCGTTGCCACTGGCCGCAGCAACATCGGAAAGGTATGTGCTTCCTGATGTAGAGCCGTTTGAGCAGGTGGTAGACAAACAGGCATGCAAGGAAGCTATAGCGCTTAAGCAGCTAAAATTCGTAAATCATTTGTATGATATCGAAAATCAGAAAGTAGAGCCACAAAGCGAAGATGAAGAAAACGCTCCGAATATTAAGCAGGaacagttttaa
- Protein Sequence
- MATSSFEQLKELIQQQLMEIDKALEVTTGVASAASALHINQSLQRNLERSYKNVLQLLKTVRARYGLNNEIIEQRQCVSRAKADERISKTGAWLNGGSYRFKGNLYFRDASGRSCPNNDDYERRSHSEMFPTDFDMRSKHVWTMFDKKNVVMGVKQQLLDHVNLKLQSQPKSRKRNAIDLHTKTLASLLASVDSSFHIDWQQLSSVEIQSRHSPYSCEAMWEVYLHPRINRNAWTHDEDTTLLAMAKSYNFQDWGAIAQAVGQRSDYQCFVRFQTTLRYQIGSASKWSKQEDDRLKSVVLQNTTNSIVDWKSVMQYFPDKTKSSVIGRYTYVLHPSISRDPFTVTEDMRLFAAVKKFDGKFYNFPRDLFPNRSLSQLRMRYYNVLAQRDKTDSWSVADDRKLIEFVTNHGKKDWVGCASFLGNHTRTSCRTRFTTITRYIEQNPGADLDDLPRRQKLKHAPVTEKNYSQCIEKWQEDPSSLEFEEESKNLTTIKKALALETQEPWSLRDDTMLMEFVATNGTLEWAKCAIHVGNKTKDNCRSRYYYIKRFLIKNPHANVEEFPRKSTKKIVTFTGQNKQAYQYFKYAYNLQLGQNYTPEFAMPSNDLNLRLAVQALRPQLAANLENLVEIPVLPSQMCQVYSQMLNPLPPVDNQPYLLPPNWSTLMGFRALCILPPDLRNGKKQEILRYDTSSAAVQIFRQRLRALFFRTTLLSRLDPDLIDNLRDALPLAAATSERYVLPDVEPFEQVVDKQACKEAIALKQLKFVNHLYDIENQKVEPQSEDEENAPNIKQEQF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338263;
- 90% Identity
- -
- 80% Identity
- -