Basic Information

Insect: Chymomyza amoena
Gene Symbol: ct_1
Assembly: GCA_037043745.1
Location: JBAMAX010000683.1:107682-197935[+]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 7e-27 8.6e-23 80.6 0.0 3 72 1175 1245 1173 1250 0.95

2 3 6.9e-32 8.5e-28 96.6 0.0 3 77 1644 1719 1642 1721 0.96

3 3 4.3e-31 5.2e-27 94.1 0.0 3 76 1909 1983 1907 1986 0.96

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	7e-27	8.6e-23	80.6	3	72	1175	1245	1173	1250	0.95
2	3	6.9e-32	8.5e-28	96.6	3	77	1644	1719	1642	1721	0.96
3	3	4.3e-31	5.2e-27	94.1	3	76	1909	1983	1907	1986	0.96

Sequence Information

Coding Sequence: ATGCAATTGATTTGTACTTTGGGgtcagccagcagcagcagcaacaacaacgacaacaatgatgatgatgatgatgatgttggcaacgatgatgatgatgatgatgatgatgaggactACAATGAGGCAGCTTTGCATTGCCGGCGACCAAAATGCCAAACATGCCAACGCAAATGCCTCAGCTGCGACTGCGGCAGCGccaccgcagcagcagcagcaacaCGCGCTACTCTAGCCGAAAAGGAAGTGAACACTTTAAAGGAGCAACTCTCTACGAACACGCCTAGCGGTAAtagcagcgacaacaacaacacagcagcagcaggaacaacaacaacagcaagcatTGAGTGCTTGGAAGACTCAGTAGCAGCAGCCGGAGGAGCAGAGAGTCAAATCAACGAAAGCGAAAGCGAGCGTAAATTGCTTAATAGCGTTGCAGCCGCCATTACGTTGCACCAGAACGGCGGTAATCTGCTTGCAACAAATACACCCTCACCATCGCCGCCATTGCTTAGCgtcgagcagcagcagcagttgcagAGCAGCCTGCAGAACGAGGTGAGCGTCAACGGTGCCGCTGCGGCCTGCCTTAATCCGAAGCTCTTCTTCAATCACGCACAACAAATGATGATGGAagcagcggctgctgctgctgcggcggctgcagctgcagcggctgcacaacaacaacagcaatcgCCCATGCATTCTCCCACAGGTGGCGCTGCGGTGCAGTCCTCCAATGCAGGCAGCACAGTAAGCAGCACACAACAAAATAGTAGCCAAAATGTTGCTGAACAAACAGCTATGGTAAatagcagcagtagcagcaataataacaacaatcaGAACAACGCCAGCAACAATGTtgctgaagatgatgatgaagatgatgaggaAGATGTATCGATGCAATCGAATATGGCGCATGCCGATAACGATGAAGACGATGATGAAGAGTTGCTCGATGAGCAGCAGGCTGTGcagcatgatgatgatgatgtggacgaggatgacgatgatgttgttgatgatgatgaagctgGCTCTAATACAGCTGCTGCAGCTAATACTCAGATTAGAACCAGAACTGATAGCATAACTGAGGAGGAGCTTAATGAGCAGCAGGCCATTGAGACGCCAGCGAGGCAGCAGGAGCAAGATAATGTTGCAGTCGATGCTGAAGCTTTAGCAATAATCAATAATCATAATACGGATAGCAATAATAGTTGTAGTCGAAAGAACAGCAACAGCAAGAATGTGCCGCAACATGTTGCACTGCGtgataataatgataatgagCAACATGTGGCCAGTGCTGAGGATGATGATTGTACCAACAAtaatactaacaacaacaataataatacggAAAAGCGCAAGAAGCGAAATaccagcaacaataacaacaataacaacaatcaaGCTGTTTTATTAGCTGCCAAAGATAAAGAGattaaaACACTTTTGGAGGAGTTGCAACGCCTGCGTGCCGCGGAACAAACTCATATAATACACATCCAACGTCTGGAGAAGCACATAGAGGTTAAGCGTCAGCACATCATGCGTCTCGAGGCACGTTTGGATAAGCAACAAATAAATGAGGCATTGGCCGAGGCTACCGCCTTGGCGGCCACAACTGTTGCAGctgccaccaacaacaacaacaactgcagcaacaacaacgacaacaacaacgttgtCGCTGTCACACACGAGGCTATCAATGATTTGGCAGTTGTTACCAAATTGTCTGAGCGTTTGCCTGCCACAGATGAGCAGCACAGCAACAACGAAGAAGAAGATGCGCTTGAAGAGGAGCGAGAGGAGACAGAGCAGCTGATCTCCAACGAGGCAGCCGAGCTCAACAACACATTGGAAACTGATGAGTTGAAAATCAAAAAGGAACAACACAGTCCATTGGATCTGAACGTGCTCAGTCCACAGTCGGCCATAGCCGCTGCAGCGGCTGCTGCAGCCGCCGCCGCCTGCGCCAATGATCCGAACAAATTCCAGGCTTTATTGATAGAACGCACCAAGGCACTGGCCGCTGAGGCGCTCAAAAATGGAGCCAGTGAAGCGTCAGCTAAAGAAATgccgcaagcagcagcagcgacagcaaAAGATGACGGCGACGCCGCAGCAGCCGCCACAGCAACAGCTGATCTAACAGCTGTTAGCAAGCACAGCGCAACGCTTGAGAATGAAACAGCTACCGCTACAGTggctccagcagcagcagctgttaaGCCGCTGTTAAGCACGCCAGCTAGCAGTAGTCCTCCATTGCCAAACATgccaacaaaaattgaaatcgaagatgatgatgatgaagatgatgagcaGCAGCTCGATGAAGCGGAGCTTCAGCTCGAAAAGCCGCTAACGCTGGAAGAGCAGCTGGTCAACAGCTATTGGCGACGCGGCTTTGAAgccagcgcagcagcagcagcagcgagcaAAACGCCAACAATTTATCAAAATGCCAAtttgccacagcaacaacaacaacaacaacagcaacagccagCCGTCCAGCTGCTGCctccaccaccgccgccgccaccacccCCCATGAGCCACTATGCAgctcagcaacaacaacaacaacactatcaacaacagcaacatggaCCTTCGTCCACAGCGCTGCTTAGTCAATTGGTTAACTCAACTTTCTCACACGCTTCTTCTTCTACTCCCTCCTCCTCCTCCGCCGCCAACTCCTCCTCCAACCACAACAATTCTTCTGGCAATTCCAAAATTCCTTTAACGCTGCGTCCAGATGTTAATCCACTGCATCAGCCACATCATCAGCAGCCAGCAACAGCAACACTGCCGCCGCATCTGCtagcgcagcagcagccgcatcTTCCACATCGTGAGCAGCAATCGGCTCTGCAGAATCATAGCAACTCCAGCCAGTCCAATACCGATTTAGAGCACAAAACTGCCGCCGGCCCACTGGCACTCAATCATcaccagcatcatcatcatggaCATGGCCTGGGCGCTCATCATGCACATCATTTGCACGATGGCTCCAACAGCTCCAGCGCCAACAGCACGTCCAATGCTTCAGCCGGTGGCACCGCCGCTGCACAGCTGGCGGCCAGCATTGCCTCCCAGCTAAATGGCAGCAAATCCTTGCTGCAAGCCGCTGCCGCCGCCAATGCGGCAGCCAATGCCGTGGCCGaggataacaacaacagcttaaCGCCCAATGCAAATGCTGCGGCTGCAGCAGCGGCCATGGCTGCACATGCGCAGCATGCACATGCCGCGGCGGCCTTGAGTGCGCCCGGTTTCTTGCCAGGATTGCCAGCGTTTCAGTTTGCCGCCGCTGCGGCCGCTGGACAAGAGCAGCGCGGACATTATCGTTTTGCCGATGCTGAGCTGCAGCTGCCACCAGGCGCTTCGATGGCCGGACGTTTGGGTGAGTCCTTAATACCCAAGGGCGATCCCATGGAGGCCAAGCTGCAGGAAATGCTGCGCTACAATATGGATAAGTATGCCAATCAGGCGCTGGATACGCTGCATATATCGCGTCGTGTGCGTGAGCTGCTGTCCGTGCATAACATTGGACAGCGTTTGTTTGCCAAGTATATACTGGGCCTGTCACAGGGCACTGTCTCGGAGCTGTTAAGCAAGCCGAAGCCCTGGGATAAGCTAACCGAGAAGGGACGTGACAGCTATCGCAAGATGCATGCCTGGGCCTGTGATGATAATGCGGTTATGCTGCTAAAATCGCTAATACCCAAGAAAGATTCTGGCCTGCCACAATATGCTGGACGCGGCGGTGGCGATGATTCCATGTCTGAGGATCGTATTGCACATATACTCAGCGAGGCCTCGTCACTGATGAAGAGCAATGCCGTGCAGGAGCAGCAGCGACGCGCCTCCGCTCATGGCGATGATACGCATAGTAATGAGGACAGCAAGTCGCCGCCACAGACCTGCACCTCGCCGTTCTTTAAGGTGGAACAGCTGAAGCAGGAGCATGCACAGCGTGAGCAGCAGCGTGAGCAACGTGAGGCTGCAgcacagcaacagcagcgggAGCAGCAACAACGCGAGCAGcgtgagcagcagcagcgtttgCGGCATGAGGATCTGGCGCAGGATAAGATGGCGCGTCTGTATCAGGAGATAATGGCGCGTACGCCCAGGGAGGCCGCTTTTCCTAGCTTCCTGCTGTCACCATTCTTTGGTGGCGCCGCCGGCATGCCCAGTGCCGCCAATGCATTCCCCGCCGCCATGGCCGCCGATGAGAACATGCGTCATGCCTTTGAGCGTGAGATTGccaagctgcagcagcagcaacagcagcaacaacaacagcatcaagCCGCCAGTTTTCCAAATTTCTCCAGCCTTATGGCACTGCAGCAACAGGTGCTCAATGGCGCACAGGATCTCTCACTGGCCAGCGGCAAAGACATGCTCAAGGATATCAAAGTGAATGGCCAACGTGGCTCACTTGATCACTCGCAGAGCTCCAAGGATGGCGAACGTGACGATGAACGCAGTCTGGATCGTGAGCGTCATAGTGCAGGCGCCGCAGCTGCGCCCGGCAGCAACAGAAGCAGCTCTGGCTTTGGTTTGCATGGCTGCAAATCAGAGAGTGGCGCTAGTGTGGGTACAGCTGGCGGTGGCACGCCTGCACCACCCGCACCACCCAGTAGCAATGCCTCGGCACAGCACACCAGCAATTCGGCAGCGCCCAGTCCATTGAGTAACTCCATACTGCCGCCGGCTTTAAGCCAGGGCGATGAGTTTGCAGCCACCGCGAGTCCTTTGCAGCGCATGGCTTCCATAACAAACTCTTTGATCACACAGCCACCAGTAACGCCGCATCATTCGACGCCACAGCGGCCCACCAAGGCGGTGCTGCCGCCCATTACACAGCAGCAGTTTGATATGTTCAACAATCTCAATACCGAGGATATTGTGCGTCGCGTCAAGGAGGCATTGTCCCAGTATAGCATTTCGCAGCGTCTATTTGGTGAATCAGTGCTGGGTCTATCACAGGGCTCAGTATCCGATTTGCTGGCACGACCCAAGCCCTGGCATATGCTCACCCAAAAGGGTCGTGAACCCTTCATACGCATGAAGATGTTCCTGGAGGATGAAAACGCTGTGCACAAGCTGGTGGCCAGCCAGTACAAGATTGCGCCTGAGAAGCTTATGCGCACGGGCAGCTACAGCGGCAGTCCACAAATACCACAAGGTTTGGCCAACAAAATGCAAGCGGCCCTGCCCATGCAAAAGATGATGAACGAGCTGAAACTACAGGAGCCTGCCCAGGCGCAACACATAATGCAACAAATGCAGGCCGCAGCTGCCATGTCGGCGGcaatgcagcagcaacaagctgCCGCCGCTGCAGCACAGCAACAAAGCCAACATCAGCAACATGCCGCAGCGCAAGCTGCCGCCGCTGCAGCAGCCGCTGGACTGCACCATCAAAATATGCTGCTTACCTCGCCAGGATTGCCGCCACAGCATGCTATAAGCTTGCCAGCAGCCACAGGCGGTAGCAGCGCCAGCGGCGGCGTGGGTGCTCCTGGAACGCCTGTGGCGCCTGTAAGTGCGGCAGCAATCTCCGGCCCCGACAAGAAGCCCATGATGATGCCAGTGCATGGCGCGCATGCACCCAATGCCATGCGCAGCTTGCATCAGCACATGTCGCCCACCGTCTATGAGATGGCTGCGCTGACACAGGATTTGGATACACACGACATTACCACCAAGATCAAGGAAGCGCTGCTGGCCAATAACATAGGCCAGAAGATATTCGGCGAGGCTGTGTTGGGCCTATCGCAGGGTTCAGTGTCTGAGCTGCTGAGCAAGCCCAAGCCCTGGCATATGCTGTCCATCAAAGGACGCGAGCCGTTCATACGCATGCAACTTTGGTTGAGTGATGCCAATAATGTGGAGCGACTGCAAGTGATTAAGAACGAGCGCCGGGAGGCCAGCAAACGACGACGCTCAACGGGTCCAAATCAGCAGGATAACAGCTCGGATACGTCGAGCAACGATACCAACGACTTTTACACCAGCAGTCCCGGACCCGGTTCAGTGGGCTCTTCGGTTGGCGGTGCGCCGCCAAATAAGAAACAGCGTGTGCTCTTCTCAGAGGAGCAAAAAGAAGCTTTGCGTCTGGCTTTTGCCTTGGATCCCTATCCAAATGTGGGCACCATCGAGTTTTTGGCCAATGAGCTGGGCCTGGCCACACGCACCATAACCAACTGGTTTCACAATCATCGCATGCGCTTAAAGCAGCAGGTGCCACATGGCCAGCCGGGCATTGATAATCCCATACCCAGCCGCGAGAACACCAATGCCACGCCCTTTGATCCCGTCCAGTTTCGCATACTGCTGCAGCAGCGTTTGGTCGAGCTGCACAAGGAGCGCATGGGCCTAAGTGGTGCGCCTCTACCATACCCACCTTACTTTGCAGCCGCAGCGTTGCTGGGACGCAGCTTGGCGGGCATGCCCGGTGCTGCAGCGGCCGCGGgtgccgctgctgcagctgcggcagcagcagctggcgcTGCCGGCGAAAACGAGCTGCAGGCCTTAAATCAGGCTTTCAAAGAGCAAATGAGCGGCCTGGACTTGTCCATGTCTACGCTTAAGCGTGAGCGCACCGATGACTACCAAGATGAGCTGGACATGGATGCCAGCGCGCATCATATGAGCGACAACGAGTCACTGGATGATGATAAAGCCTCCAACCTGAACTCGGACTATGAGAAGGCCATGCAAAAATCCGCACTTGCCTCAGCTGCTGCCTATATGAGCAATGCTGTACGCAGCTCACGTCGCAAGCCCGCGGCGCCGCAATGGGTTAATCCCGCAGGCGCTGGCACGCCCAGTGGAGCAGCTGCCGTAGCCgtagccgcagcagcagcagcggctgcagcAGCCGCCGCGGACAGCGAGCGCATTATCAATGGCGTTTGCGTTATGCAGCCCTCGGATTATGGACGTGATGAGGCGGAGGGCAAATCGACGGGCGCAGGCAGCGAGGCGGCAAACAGCGAGAGCGGTGAGCATGAGCATGCGCATTTGGACATGGATCAGAGCTTCATGGAGCCCGAGGTGCACATCAAGCAGGAGGAAGACGATGAGGAAGAAGAGTTGAACAATGAATGTGGCGCCAACGATGCCGCAACAGCGGAAGAAAAGAAACTCAAGGTGATCAACGAGGACAAGCTGCGTCTGGTGCGCGTGCGTCGTCTGAGCAGCAATGGAGCCGCAGCCAATCCAGCCGAACTAGAAGAGAGCTGTGCGCCAGCGTCGCAGCAGACAGCGAGCGCAGCGCCTGCGCCAGCAGCGGCCTGGTTTTAA
Protein Sequence: MQLICTLGSASSSSNNNDNNDDDDDDVGNDDDDDDDDEDYNEAALHCRRPKCQTCQRKCLSCDCGSATAAAAATRATLAEKEVNTLKEQLSTNTPSGNSSDNNNTAAAGTTTTASIECLEDSVAAAGGAESQINESESERKLLNSVAAAITLHQNGGNLLATNTPSPSPPLLSVEQQQQLQSSLQNEVSVNGAAAACLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAQQQQQSPMHSPTGGAAVQSSNAGSTVSSTQQNSSQNVAEQTAMVNSSSSSNNNNNQNNASNNVAEDDDEDDEEDVSMQSNMAHADNDEDDDEELLDEQQAVQHDDDDVDEDDDDVVDDDEAGSNTAAAANTQIRTRTDSITEEELNEQQAIETPARQQEQDNVAVDAEALAIINNHNTDSNNSCSRKNSNSKNVPQHVALRDNNDNEQHVASAEDDDCTNNNTNNNNNNTEKRKKRNTSNNNNNNNNQAVLLAAKDKEIKTLLEELQRLRAAEQTHIIHIQRLEKHIEVKRQHIMRLEARLDKQQINEALAEATALAATTVAAATNNNNNCSNNNDNNNVVAVTHEAINDLAVVTKLSERLPATDEQHSNNEEEDALEEEREETEQLISNEAAELNNTLETDELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLIERTKALAAEALKNGASEASAKEMPQAAAATAKDDGDAAAAATATADLTAVSKHSATLENETATATVAPAAAAVKPLLSTPASSSPPLPNMPTKIEIEDDDDEDDEQQLDEAELQLEKPLTLEEQLVNSYWRRGFEASAAAAAASKTPTIYQNANLPQQQQQQQQQQPAVQLLPPPPPPPPPPMSHYAAQQQQQQHYQQQQHGPSSTALLSQLVNSTFSHASSSTPSSSSAANSSSNHNNSSGNSKIPLTLRPDVNPLHQPHHQQPATATLPPHLLAQQQPHLPHREQQSALQNHSNSSQSNTDLEHKTAAGPLALNHHQHHHHGHGLGAHHAHHLHDGSNSSSANSTSNASAGGTAAAQLAASIASQLNGSKSLLQAAAAANAAANAVAEDNNNSLTPNANAAAAAAAMAAHAQHAHAAAALSAPGFLPGLPAFQFAAAAAAGQEQRGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGGGDDSMSEDRIAHILSEASSLMKSNAVQEQQRRASAHGDDTHSNEDSKSPPQTCTSPFFKVEQLKQEHAQREQQREQREAAAQQQQREQQQREQREQQQRLRHEDLAQDKMARLYQEIMARTPREAAFPSFLLSPFFGGAAGMPSAANAFPAAMAADENMRHAFEREIAKLQQQQQQQQQQHQAASFPNFSSLMALQQQVLNGAQDLSLASGKDMLKDIKVNGQRGSLDHSQSSKDGERDDERSLDRERHSAGAAAAPGSNRSSSGFGLHGCKSESGASVGTAGGGTPAPPAPPSSNASAQHTSNSAAPSPLSNSILPPALSQGDEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQAALPMQKMMNELKLQEPAQAQHIMQQMQAAAAMSAAMQQQQAAAAAAQQQSQHQQHAAAQAAAAAAAAGLHHQNMLLTSPGLPPQHAISLPAATGGSSASGGVGAPGTPVAPVSAAAISGPDKKPMMMPVHGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVIKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGIDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPLPYPPYFAAAALLGRSLAGMPGAAAAAGAAAAAAAAAAGAAGENELQALNQAFKEQMSGLDLSMSTLKRERTDDYQDELDMDASAHHMSDNESLDDDKASNLNSDYEKAMQKSALASAAAYMSNAVRSSRRKPAAPQWVNPAGAGTPSGAAAVAVAAAAAAAAAAAADSERIINGVCVMQPSDYGRDEAEGKSTGAGSEAANSESGEHEHAHLDMDQSFMEPEVHIKQEEDDEEEELNNECGANDAATAEEKKLKVINEDKLRLVRVRRLSSNGAAANPAELEESCAPASQQTASAAPAPAAAWF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00338226;
90% Identity: iTF_00338226;
80% Identity: iTF_00335770;