Camo014953.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- kn
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010003189.1:69131-102983[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-92 4.1e-88 296.6 0.1 10 182 159 319 150 339 0.93
Sequence Information
- Coding Sequence
- ATGGACAACATTGGGTGGCGGCCGCCTTTTGGCCACTGTGTCGCTGCTGCGGTGCAACATTTCTATATAGCCACACCGTTGCGACTGTGCCAATTCTCAGTGTTCCTAAATCCCACACCAGCCATGCCCATGTGTACAAGTTGCAAGTCCCCCATCACGAGCACCGCCACCACGGCTGCCGAACTAGCTATAACACCCGCTTCAAATAACTATACAAAAGTGAGCGAATACCCGTACGCTGATCTCCACCAGCATCATCACTTCGCTAATACAGCGCCCCTGACCAGCGCGGAAAGCTTCAAGCTGAGATCGGACGAACCGGTGCCGGGCTTTAGCTCGGCCTCGCCCTGGCCCACGTTGGAGCTGGAATGGGGCCGCAAGCTCTATCCGTCGGCGGGTCCACGTTCGGCGGGTGGGCTAATGTTTAGCCTACCACACACGGCCGCCGATATGAATCAGCCGCGCGGCCCCATGACTTCGCTGAAGGAAGAGCCGCTGGGTGCGCGTGCCTGGATGCAGCCCGTCGTCGATCAGTCCAATTTGGGCATTGGACGCGCCCATTTCGAGAAACAGCCGCCCAGTAATTTGCGTAAATCGAACTTTTTTCACTTTGTGATTGCATTGTACGATCGCGCCGGACAGCCCATAGAGATTGAGCGCACTGCCTTCATTGGTTTCATTGAGAAGGACTCGGAATCGGATGCAACCAAGACCAATAATGGCATACAATATCGACTGCAGCTACTCTATGCGAATGGTGCGCGACAGGAGCAGGACATATTCGTGCGGCTGATCGATTCGGTAACCAAGCAGgcTATCATCTATGAGGGTCAGGATAAAAATCCCGAAATGTGCCGTGTACTGCTAACGCACGAAGTCATGTGCAGCCGCTGCTGTGATAAGAAGAGCTGTGGTAACCGCAACGAGACACCATCGGACCCCGTCATTATTGATCGagGCAACACCAACCGCAACGATCGCCTCCTTGTCCAATGCCAGTTGAATGACGAATGTTTCTACGAGTATCCGGAACGTGTGCCAGAGTTTTGA
- Protein Sequence
- MDNIGWRPPFGHCVAAAVQHFYIATPLRLCQFSVFLNPTPAMPMCTSCKSPITSTATTAAELAITPASNNYTKVSEYPYADLHQHHHFANTAPLTSAESFKLRSDEPVPGFSSASPWPTLELEWGRKLYPSAGPRSAGGLMFSLPHTAADMNQPRGPMTSLKEEPLGARAWMQPVVDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDATKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQAIIYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRGNTNRNDRLLVQCQLNDECFYEYPERVPEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00338115;
- 90% Identity
- -
- 80% Identity
- -