Camo014954.2
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- kn
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010003189.1:122091-124288[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-119 1.2e-115 387.5 0.0 205 384 1 209 1 213 0.99 2 2 1.1e-07 0.00055 18.8 14.3 422 519 214 310 209 323 0.64
Sequence Information
- Coding Sequence
- ATGCGCAGATTTCAGgtgGTGATATCCACGCAAGTGGCCGTCGATGGACCCTTGCTGGCCATCTCGGATAATATGTTCGTGCACAATAACTCCAAACATGGACGCCGCGCCAAACGTCTGGATACAACGGAAGGTACAGGCAACACATCCCTGTCCTTATCCGGTCACCCCCTTGCGCCCGACAGTACCTACGATGGTCTTTACCCACCGCTGCCCGTAGCCACGCCCTGCATCAAGGCCATATCTCCCAGCGAAGGCTGGACCACGGGAGGTGCCACTGTCATTATTGTGGGCGATAATTTCTTTGACGGTCTGCAAGTTGTCTTTGGCACCATGCTGGTTTGGAGCGAGCTAATAACGTCACATGCGATACGTGTCCAGACACCGCCCAGACACATTCCCGGCGTCGTCGAGGTTACGCTCTCCTACAAGAGCAAGCAGTTCTGCAAAGGTTCGCCCGGCCGCTTTGTCTATGTCTCAGCACTCAATGAGCCCACAATCGACTATGGTTTCCAGCGCCTGCAAAAGCTTATACCACGCCATCCCGGCGATCCAGAGAAACTGcaaaaggaaattattttaaaacgtgCAGCCGACTTGGTGGAGGCTCTCTACTCCATGCCCAGCAGATCACCTGGCGGTTCCACCGGTTTCAACTCATATGCCGGCCAGTTAGCGGTTAGCGTGCAAGATGGTACTGGTCAGTGGACGGAGGATGACTATCAACGAGCGCAGTCCAGCAGCGTCAGCCCGCGTGGTGGCTATTGCAGCAGTGCCTCTACGCCACATAGTTCGGGTGGTTCATATGGCGCCACAGCATCCACCGCAGTTGCAGCCACTGCGAATGGTTATGCGCCTACACCCAATATGGGCACGCTGTCATCCTCGCCGGGCAGTGTCTTCAACTCCACATCAATGTCCGTGTCCTCGACGTGGCATCAGGCGCTTGTCCAGCATCATCATGTCGCACACCCGCATCACTatccgcatccgcaccaaccgtGGCACAATCCAGCCGTATCCGCAGCGACAGCAGCAGTTTAG
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSLSGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGATASTAVAATANGYAPTPNMGTLSSSPGSVFNSTSMSVSSTWHQALVQHHHVAHPHHYPHPHQPWHNPAVSAATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530692;
- 90% Identity
- iTF_00484185;
- 80% Identity
- iTF_00337299; iTF_00337248;