Camo000221.1
Basic Information
- Insect
- Chymomyza amoena
- Gene Symbol
- ARID4B
- Assembly
- GCA_037043745.1
- Location
- JBAMAX010000056.1:171229-173109[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.5e-29 2.3e-25 89.2 0.1 1 88 296 381 296 382 0.96
Sequence Information
- Coding Sequence
- ATGCAGCAAGCTGACGACCCACCATCGTTGCCCGTGGGCACAGAGGTCAGCGCCAAATATAAAGGTGCATTTTGTGAAGCCAAAGTGAGCAAAGTTGTGAGAAACATCAAAGTAAAGGTAGCATATAAGCAGGGTCTAGGCTCCGGCATTGTCTCTGATGATGCTATTAAAGCGCCAACTGGACAACTGCGCGTGGGCGCTGTTGTGGAGGTGCGACATCCGGATCGTAAGGAGACTGTGGAGGCAACCATAACGAAAATTCAGGATGGCTCGCAGTATACAGTGGTTTTTGATGATGGTGATATAACTACACTCAGGCGCACGGCTTTATGTCTCAAGAGCGGAAGGCATTTTAATGAAAGCGAGACTTTGGACCAATTGCCGCTAACGCATCCGGAACATTTTGGCAATCCTGTCGTAGGCGGTCGGCGCGGACGTCGCCGTGGCCATCTTAATGGTGAAAGctccgatgatgatgatgaaagtGATGCAAAGGAGGTGGTTAATGAAAAGGAGGAAAATATTGGCAAAGTTGTTTGTGTAGAAACGGAGTCCAAAAAGAAAGACAAAGAGAAATGGTTTCCCGCACTTGTAGTTGCGCCAACAGCCCAGGCTACGGTGCGAATTAGAGTTAAAGATGAGTATTTAGTACGTTCATTCAAAGATGGCCGATATTATACGGTGCCAAAGAAAGAAGCAACCGAGTTTACAAGAGAAGTGGCTGGCAAACAAGATGTGCCTGCTGTGCAGGCAGCTTTAGAGTTTCTAGACAGCAGCATTTTGCCACCACATTGGGATCGCGATTCGCTCTTTGGCCTAAGCAATCTATCAAGCGACGACGAAGGTGAAATTGATTCGGACTCATCAGATGATGAGCCGCATGAGGAAAAGGATCGATTTGTAGCCCAACTTTATAAGTATATGGACGATCGCAGCACGCCCTTGAACAAGGTACCTTCCATTCAAAACCGAGATGTGGATCTGTATCGCTTGTTTCGTGCAGTGCAAAAACGCGGCGGCTACAATCGTGTAACAACCCAAAATCAATGGAAAGTTATTGCCATACGTTTGGGTTTTACGCCCTGCACAATAAGTGTTATGAATCTGGTCAAGCAGGCGTATAAAAAGTTTCTGCAGCCATATGGTGACTTTCATCGCAAGCTTGGTTGTTCCATGCTTATGACTTCGCGCAACTCTAACCGTAGCAAGGGTCGTAGCTTGGTTAGAGCCAACTCCGTAGCATCGCCCAAGCCCGCGGAGGTCAAAACGGAGATCTTAAATAAACTGGCGATGCTCAATatgcccagcagcagcagcagtagcgcCACAGCTACAGCTGCACCAAGCGCCGCTCAAAGCTCAGCAGTGGCCACCAGCAGCGTGGCTGTAGTAGCCACTGCACcacctgcagcagcagcagtagcttCCCATTCCGCTGCTGAGGAATCTGGAAACACCAGTGAATCCAGCGTAGTTGAACCAATCAAAAAACAACGCAAAGCATCCGCTGCCAGCAGCGGCAAAGTTAAGAGCCTCGTAGAAAAATACGAGGAGAAGTCAACTCCGCCTCAACCTATAGTGGCAGCTGTTAGCGTTACATCAGAGGCAGATTTGCCATTGGCAAAGATAAAAGCAGCTGCTGCTACGCGTAGTAGTGTGGAAAAGGAACCACCCAATATAAGCAGCAACACCTCAACCAAGGCTTTGTCGGAAACACAAAGAAGTCGTGATGTATCGCCTTCTGCCGCCAATTGA
- Protein Sequence
- MQQADDPPSLPVGTEVSAKYKGAFCEAKVSKVVRNIKVKVAYKQGLGSGIVSDDAIKAPTGQLRVGAVVEVRHPDRKETVEATITKIQDGSQYTVVFDDGDITTLRRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRRGHLNGESSDDDDESDAKEVVNEKEENIGKVVCVETESKKKDKEKWFPALVVAPTAQATVRIRVKDEYLVRSFKDGRYYTVPKKEATEFTREVAGKQDVPAVQAALEFLDSSILPPHWDRDSLFGLSNLSSDDEGEIDSDSSDDEPHEEKDRFVAQLYKYMDDRSTPLNKVPSIQNRDVDLYRLFRAVQKRGGYNRVTTQNQWKVIAIRLGFTPCTISVMNLVKQAYKKFLQPYGDFHRKLGCSMLMTSRNSNRSKGRSLVRANSVASPKPAEVKTEILNKLAMLNMPSSSSSSATATAAPSAAQSSAVATSSVAVVATAPPAAAAVASHSAAEESGNTSESSVVEPIKKQRKASAASSGKVKSLVEKYEEKSTPPQPIVAAVSVTSEADLPLAKIKAAAATRSSVEKEPPNISSNTSTKALSETQRSRDVSPSAAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01558809;
- 90% Identity
- iTF_00336503;
- 80% Identity
- -