Cfes048402.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysotoxum festivum
Gene Symbol
PGRP-SC2
Assembly
GCA_963931855.1
Location
OZ007556.1:148439028-148464759[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 11 0.018 4.6 9.6 3.7 1 21 224 244 224 246 0.94
2 11 1.3e-06 0.00033 22.7 0.7 1 23 252 274 252 274 0.99
3 11 0.00092 0.24 13.7 0.5 3 23 282 303 280 303 0.96
4 11 0.051 13 8.2 3.9 1 21 309 329 309 331 0.95
5 11 5.1e-05 0.013 17.6 3.0 1 23 337 359 337 359 0.99
6 11 0.00021 0.056 15.7 2.8 1 23 365 387 365 387 0.98
7 11 0.0003 0.079 15.2 3.7 1 23 395 418 395 418 0.98
8 11 0.00029 0.075 15.3 3.7 2 23 425 446 424 446 0.96
9 11 0.003 0.79 12.1 0.5 1 23 452 474 452 474 0.98
10 11 0.00059 0.16 14.3 6.0 1 23 480 503 480 503 0.96
11 11 1.8e-07 4.8e-05 25.3 0.9 1 23 517 539 517 539 0.94

Sequence Information

Coding Sequence
ATGTCGCGAATTTCGAAtggtatacaaattaaaatcgaaACAAATGAGCTTCAGACATACTTAGATacatttaataaagaaatagaAGAAGGCAGTCGTAGTATAAGTAATAGTCTTGTAGATGCTGCGGAATTATTGAATGCTCATTCTAATAATGATGAAGACGACACAGGAACGTACTTTGTCGATGAAGCTGGAAACTATTACTATCAGGCGACCAAAGATGCAGAACCAGTACCTACAGACCCACCTGAAAATGCTTATATTGTTGGAGAGGACAGTGATATGGAGGAAATAACATTAGCGAAAATaccaaaaacacaaattaagaatcagcaaaattcaaaaactcttaaaaattcttcaaaaaatttgaagaaCAGTGAGGATGAGGATGCTGATTATATACACTTAAGTTATGCACTTGGTGAGAATGACGTAGACGTCGATGATATAAATGAGGATGAAGATATTCCCAATAATGAGGAAGATGAGGTGGGAAATGAAGaagacgatgatgatgacgataaCGGAAATGAAGATAGAGACAAtgatgaaaaagaaatatttgattttaatgaaaatgagGAAACCGAAGAGAAACTCGTAACTATAGATTATACTACAAAAGTTGTATGTCTAAACccgaaaaataagaaaatcacaTCCCACCCGTGTCCTCATTGCGAATATGTGTCTCCAAAAAGATATTTATTAGCCCGTCATATGAAATGCCATTCGGACGAACGACCGTTTAAGTGTTCAGTCTGTGATCGTGGTTTCAAGACAAACGCGTCGCTCCAAAATCACGCCAACACTCATACCGGTAAAAAGCCTTATGGGTGTAAGTCTTGCCCAAGCACTTTTACTACCTCTGGAGAACTGGTGCGTCATGTTCGCTACAAGCATACCCATGAAAGACCCCATAAATGCTTCGAATGCGATTATGCTAGTGTGGAACTAAGCAAACTAAAGCGCCACATTCGATGTCACACTGGAGAACGTCCTTTCCAATGCCCGCACTGTACATACGCGTCGCCAGACACTTTCAAATTAAAGAGGCATATGCGCACCCATACTGGGGAAAAGCCATATGAGTGTGAAATTTGTCATTCCAAGTTTACTCAATCGAATTCTCTTAAACAACACAAATTAATACACAGTGTTGGCGATAAACCCGTTTTCCAGTGTCACCTTTGTCCAACGACTTGCGGCCGAAAGACAGACTTAAGAATACACATTCAAAAGTTGCACACCTCTGATCGCCCGCTGCATTGTAAGAGATGTGGTAAATCCTTTCCAGatcgatatacatataaagtgcACAATAAGACCCACGATGgtgaaaaatgtttcaaatgCGATTTATGCCCTTATGCTTCAATATCTCAGCGGCATTTAGACTCCCATCTTTTGATTCACACCGATCAAAAGCCGTTCGAGTGTAAGAATTGTCGACACCGTTTCAGACAAAAACAGCTTCTCAGGCGCCACCAAAACCTTTATCACAATAAGGACTACGTCCCACCACAACCACAAGAAAAAACTCATTCGTGTCCCGACTGCGAGCGTTCCTTTAGTAGAAAAGGAAATCTTATGAGGCACATGGTTGCACATGATCCCGATTTAACATCAAAGCAAGTAAATCCTGAAAAGAAGTTTGTCATGGTTACTGGAACGGAAAACGAGGAAGGGACGTTGGAAGCTCTTAGCGATGTTGAGGAGGATGAAGGAGAAGAAGATTACGAAGTCGACGGGGAAGAAGAACAAATGGAAGTTGGCGATGAAGAGGCAATGGAATCATATATAGAAACAGCAGTATCAGATATAACCAATTTTGAGGAGGTTTTAATTAAGAAAGAGGACGATAGGGATTTTGTTACGCTCGAAGGTATCGAAGATCAGCAATACATGGTCGTGGAAATAATACAAAGCGACGATGAAAATGACCTACCCTATGATGAagataaaacaataaaagatgAGTTAGATGATGAGTTTGTTATTTCAGaGCTTACTGACGAAGGAGTCAATATTATTAAAGAACGAAAAAACCAAGCAGCAGAAATGGATGACTGTTTTGGATTTAGtgaatcggaagaaattttGGAAGAGTCCATTAGAAGTGATTCAGAACAACAAGGCGATTctGCCCAAATTCAAGGTTCTGCTTCGAATAGCAGTGAACCCACAATTGTTATTACAATAGAGGCAAATGAAAAAACGCCACTTCTGGGAGGCTCTTGGAAGCAAAATCCATCTTCAGGAAAATATTCGAAGAAATTCAATGACAGTGGGCTAACGGATTTAAAGTTTTGTGACTTTCGAGTGCTTGGTATAGCTGTATTATTGGCTGGTGGTTTCACTATTGCCACCTATCTTCTGGTTACGGAATctcgtcTACCAACGGCAAGTTTTGCATTGGACCTGGTAAACCGTGATGTTTGGAGTCAGTCAGTTATTCCCTTGGGTAGGCTTCTTAATGACTCAAAGGTTTTGCATATTCTTTTGGTACAAACAGGTGGTAATATATGCTCGGAACTCTATAGCTGCATGGATATTCTCAGAGATATGCAGAAGACACGCGGAAATGTGCACGGTGAGATACCTTACAATTTCCTCATTGGCGGTGATGGTCAAACTTACGAAGTGAGGGGATGGAACCACGAGAGTGGACTGAGTATCTTGCCACAACAGTCGTCTTTGGTAATTGGCTTCATTGGCAATTACACCTTTGTTCCACCGACTGAAATACAATGCACCAGTGCCCTGTCTATAGTTAATGAATCTATGCAAAGGAAGAAATTGCACAGCTCCTACCAAGTCTTCGGCCTCAGGAATCTATCAATCTCACACTTTGACGGCGAAGCGCTGTTCAATCGTATTTCGAAGTGGCAGCGTTTTGTTACTTTATTGCATGTCTTGTAA
Protein Sequence
MSRISNGIQIKIETNELQTYLDTFNKEIEEGSRSISNSLVDAAELLNAHSNNDEDDTGTYFVDEAGNYYYQATKDAEPVPTDPPENAYIVGEDSDMEEITLAKIPKTQIKNQQNSKTLKNSSKNLKNSEDEDADYIHLSYALGENDVDVDDINEDEDIPNNEEDEVGNEEDDDDDDNGNEDRDNDEKEIFDFNENEETEEKLVTIDYTTKVVCLNPKNKKITSHPCPHCEYVSPKRYLLARHMKCHSDERPFKCSVCDRGFKTNASLQNHANTHTGKKPYGCKSCPSTFTTSGELVRHVRYKHTHERPHKCFECDYASVELSKLKRHIRCHTGERPFQCPHCTYASPDTFKLKRHMRTHTGEKPYECEICHSKFTQSNSLKQHKLIHSVGDKPVFQCHLCPTTCGRKTDLRIHIQKLHTSDRPLHCKRCGKSFPDRYTYKVHNKTHDGEKCFKCDLCPYASISQRHLDSHLLIHTDQKPFECKNCRHRFRQKQLLRRHQNLYHNKDYVPPQPQEKTHSCPDCERSFSRKGNLMRHMVAHDPDLTSKQVNPEKKFVMVTGTENEEGTLEALSDVEEDEGEEDYEVDGEEEQMEVGDEEAMESYIETAVSDITNFEEVLIKKEDDRDFVTLEGIEDQQYMVVEIIQSDDENDLPYDEDKTIKDELDDEFVISELTDEGVNIIKERKNQAAEMDDCFGFSESEEILEESIRSDSEQQGDSAQIQGSASNSSEPTIVITIEANEKTPLLGGSWKQNPSSGKYSKKFNDSGLTDLKFCDFRVLGIAVLLAGGFTIATYLLVTESRLPTASFALDLVNRDVWSQSVIPLGRLLNDSKVLHILLVQTGGNICSELYSCMDILRDMQKTRGNVHGEIPYNFLIGGDGQTYEVRGWNHESGLSILPQQSSLVIGFIGNYTFVPPTEIQCTSALSIVNESMQRKKLHSSYQVFGLRNLSISHFDGEALFNRISKWQRFVTLLHVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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