Cfes052932.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- -
- Assembly
- GCA_963931855.1
- Location
- OZ007557.1:11827884-11831447[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00018 0.046 15.9 3.5 1 23 584 606 584 606 0.98 2 12 2.7e-05 0.0072 18.5 2.5 1 23 613 635 613 635 0.98 3 12 5.7e-06 0.0015 20.6 0.5 1 23 652 674 652 674 0.99 4 12 6.9e-06 0.0018 20.4 1.3 1 23 684 706 684 706 0.97 5 12 4.2e-06 0.0011 21.0 0.6 1 23 712 734 712 734 0.98 6 12 1.1 3e+02 4.0 0.1 10 23 737 750 735 750 0.89 7 12 4.7e-07 0.00012 24.0 1.3 1 23 756 778 756 778 0.95 8 12 0.04 10 8.5 4.0 1 23 784 806 784 806 0.98 9 12 2.1e-05 0.0055 18.9 1.3 1 23 812 834 812 834 0.98 10 12 1.1e-06 0.00029 22.9 4.9 1 23 840 862 840 862 0.99 11 12 2.3e-06 0.00061 21.9 2.3 1 23 868 890 868 890 0.99 12 12 1.2e-05 0.003 19.7 0.5 1 23 896 918 896 918 0.97
Sequence Information
- Coding Sequence
- ATGGAATTGTTTTCCAAATCAAAAGATATTTTCTTCTCTAATTTTGATAAGATATGCCGAACTTGCATAAAAACAATAACGGAACCACTTCATCAGATATTTGATTCAGAGGTTGCCATATTAAATGAAAGCATAAAAACTTACAAATTACTGATGGCGGTATCTACACTTAAAATCCATCCTGACGATGATTTACCCAAAGCAATATGCATCCAATGTCTTGATAGTTTAACAAAAGCATATAACTTTCAAAAAATGTGCATTCTCTCTGATCTATGCATGAAAAGTGCAATACTACCAAATCAACTACAAATCAGCTTGCAAAAACTCCCACCCACTACTGtgcattataaaaaacaatctgAAAACTCTACTATCTTCGAGCCATGCGTCGAAAACCTAATAACTGCAAGTGAAAATCCAGACAGTATCAAAATTCTTTACTCCGAACCAATGAATGCAGGTATTGAAAATATTGCCGATTCCGATCAGTATATTGTCTCGAAGCCAATCGTCCAAAGTGAAATGCTTACAAGTGAAGATATAAACGCTATGAAGATTGTGTTTCTTCCTCCCGAAAGCGATCTGATGCAGCATTCAGGATCGAGCATAATCATTCCAAGTGAAATCAACAGTCGTTTGGACATTTTTGCACATGTTACTCCATCAATAGGACATGTTGACCATATGGGTCAACCATGTATGGTTATTCCGAATCAAATCAACAGCAATGGCAACATATTTCAAACTGAGCCTTCGCCAATAGTTGAAGATGAAGCAAATCTTTTGGAGCCACGTATCAAAAGTACCATGCTTTTAAATGAACCGCAAGTTGATTTCACAAATGTCCCACTCTCAGAAGTCCCTCCGTGGAAAagggaaataaaatttcaatccATTAAGACTGTGATCCAAGAGCCATGCGTCCAAAATATTATAATTCGaagtgaaaaccaaaaaagtatTGATTTAAGTGAGACAAATGTTTCTGAACCATGCAAGCATAGTAAGAAGATTCCGAATGAAGGGAAAAACTGTACAGAAATATTGTCAATAGAGACGTTACCTACAGTTAGTCACATTCAACCTGTTCAACGTTTCAATGAAGCAGATGTACCAAAAGAAAATGAACAAAGTTCAATAGTTCAAAGTTTGCCTAAAAGGATGTCCAAGGTCCTGCTCGCTGATACACTGGCTCCAGAAATCGAAATTGTTGATGTTGAGGAGACGACTCTTTCTAAAACTGAATCAACTGCTGAATACGATGATGATGAAAAATCAAATCCCTCTACCAAGTTGCTAGTTGGCTTCCGTTCTATGAAATGTGGGACTAACAACTTTCATCAGGCGGATGTAATACAAACTAAGGAAACATCAAACCACGATGATCATAACGATAAAGCAAAAATAAACTTGCTAGCTGACTCGCATTCTACAGAAGGTAAAGGCGAACAATGTAATTTGGAGAATGTTAAAAATATTGGATCAGTATCAGTCGAAGAGGATGACTATCATAGTGATGATGAGAATgatgagaaaacaaaaatTTTTCTTCATGAGAAGGATTTAATACATAGAAGCGATATGAGCAATTCGgatacaaagaaaaaagtcaCTGCATCTGAATCAGACGAATCAAATAATGAAAGTCTGGACCAAAAAGAAGATGTTGACATCAAAATCGAAAATTCTGAGCCATTTgtccaaaaaattgaaaaGCCTAATCCTCGCATCAACAAATATGCCTACTTCACCTGCGAAATTTGTGGCAAAACTTTAGATCGCGAACATCGTCTTCATCGTCATAtgaatctacacaaaaaagaagGACGACCATTCGAATGTGAATACTGCAGAAGACGCTTCGCCCAAGAAGCCCATTTACAACGTCATTTTATTACCCACGGAAAGAGGTTCCTGGATATGGTagaagcaaaacaaaatgtaGATGGATATCAGTGCCCTGAATGTCCaagaaaatttctcaaacaagAATCACTAGCCTCTCATATGAGAACTCATCGAAAAGAAATTGATGCAACCAAACGATTTACGTGTGAAATATGTTCAAAGGTATTTGAAAGTCTGTATCAACTCACAAGGCACAAACAACTGCACGAAGGTAATCGTAAATATAACTGCGAAATTTGTGGGAAAACCTTTGGCTTAAGTTCTCATTTGGTTGATCATCTTAACATGCACATCGCCTTTCAGCAAGCATGTACACTAAAAGATCACTTACGCACGCATACTGGTGAGAAGCCCTTCTTATGCGCGGAatgtggaaaaaaattcaacaattcAAGCAATTTAAGACAACATCAATTGCGTCATAGTGGTATTAAACGTTACCAGTGTTCAGAGTGTCCAAGTAAGTTTACTTGTAAAAGTGGTCTTTTCTCGCACACGACAACTCACCGCAATCAAAAACCCTATGTTTGTGGAACTTGCGGATCAAGATTTACCAAAAGCTACTCGTTAAAGAAACATGAAAGAATACATACTGGAGAAAAGCCGTACAAATGTGATTACTGCGAAATGAGGTTCAATTCCTCTGATCACATGAAACGCCATATGCGAACACATACTGGAGAGAAACCATATAAGTGTAAATATTGCGAAAAGAAATTTGCCCAATCAAATGATATGATAAAACACCTTCGATCACATGTTGGTGACAATGTGTATAAATGCGAAGAGTGTGATGCATCGTTTAGATTGAACACGGAGTTGAAAAAACATATCTCTGAGCATTATCAGGCCCAAGTTCAAGAtaaatcaacaaacaaaaattcaaaaaaccattGA
- Protein Sequence
- MELFSKSKDIFFSNFDKICRTCIKTITEPLHQIFDSEVAILNESIKTYKLLMAVSTLKIHPDDDLPKAICIQCLDSLTKAYNFQKMCILSDLCMKSAILPNQLQISLQKLPPTTVHYKKQSENSTIFEPCVENLITASENPDSIKILYSEPMNAGIENIADSDQYIVSKPIVQSEMLTSEDINAMKIVFLPPESDLMQHSGSSIIIPSEINSRLDIFAHVTPSIGHVDHMGQPCMVIPNQINSNGNIFQTEPSPIVEDEANLLEPRIKSTMLLNEPQVDFTNVPLSEVPPWKREIKFQSIKTVIQEPCVQNIIIRSENQKSIDLSETNVSEPCKHSKKIPNEGKNCTEILSIETLPTVSHIQPVQRFNEADVPKENEQSSIVQSLPKRMSKVLLADTLAPEIEIVDVEETTLSKTESTAEYDDDEKSNPSTKLLVGFRSMKCGTNNFHQADVIQTKETSNHDDHNDKAKINLLADSHSTEGKGEQCNLENVKNIGSVSVEEDDYHSDDENDEKTKIFLHEKDLIHRSDMSNSDTKKKVTASESDESNNESLDQKEDVDIKIENSEPFVQKIEKPNPRINKYAYFTCEICGKTLDREHRLHRHMNLHKKEGRPFECEYCRRRFAQEAHLQRHFITHGKRFLDMVEAKQNVDGYQCPECPRKFLKQESLASHMRTHRKEIDATKRFTCEICSKVFESLYQLTRHKQLHEGNRKYNCEICGKTFGLSSHLVDHLNMHIAFQQACTLKDHLRTHTGEKPFLCAECGKKFNNSSNLRQHQLRHSGIKRYQCSECPSKFTCKSGLFSHTTTHRNQKPYVCGTCGSRFTKSYSLKKHERIHTGEKPYKCDYCEMRFNSSDHMKRHMRTHTGEKPYKCKYCEKKFAQSNDMIKHLRSHVGDNVYKCEECDASFRLNTELKKHISEHYQAQVQDKSTNKNSKNH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -