Basic Information

Insect: Chrysotoxum festivum
Gene Symbol: -
Assembly: GCA_963931855.1
Location: OZ007555.1:57630306-57638269[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.24 63 6.1 0.0 9 23 48 62 46 62 0.92

2 16 2.1e-06 0.00055 22.0 1.0 1 23 68 90 68 90 0.97

3 16 9.9e-05 0.026 16.7 0.5 1 23 96 118 96 118 0.97

4 16 0.00044 0.12 14.7 1.4 1 23 124 146 124 146 0.97

5 16 0.003 0.79 12.1 3.8 3 23 154 174 152 174 0.98

6 16 0.00036 0.094 15.0 4.5 1 23 180 202 180 202 0.99

7 16 0.45 1.2e+02 5.2 1.7 1 21 307 327 307 328 0.93

8 16 3e-05 0.0079 18.4 0.2 1 23 336 360 336 360 0.98

9 16 0.0012 0.31 13.3 0.1 2 23 362 384 361 384 0.89

10 16 0.00036 0.094 15.0 1.0 1 23 390 414 390 414 0.96

11 16 5.9e-06 0.0015 20.6 6.3 1 23 420 442 420 442 0.99

12 16 4.7e-07 0.00012 24.0 0.8 1 23 448 470 448 470 0.99

13 16 4.9e-05 0.013 17.7 0.2 1 23 476 498 476 498 0.98

14 16 0.0044 1.1 11.5 0.2 1 23 504 526 504 526 0.97

15 16 0.00011 0.029 16.6 4.6 1 23 532 554 532 554 0.99

16 16 5e-05 0.013 17.7 0.8 3 23 562 583 560 583 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.24	63	6.1	0.0	9	23	48	62	46	62	0.92
2	16	2.1e-06	0.00055	22.0	1.0	1	23	68	90	68	90	0.97
3	16	9.9e-05	0.026	16.7	0.5	1	23	96	118	96	118	0.97
4	16	0.00044	0.12	14.7	1.4	1	23	124	146	124	146	0.97
5	16	0.003	0.79	12.1	3.8	3	23	154	174	152	174	0.98
6	16	0.00036	0.094	15.0	4.5	1	23	180	202	180	202	0.99
7	16	0.45	1.2e+02	5.2	1.7	1	21	307	327	307	328	0.93
8	16	3e-05	0.0079	18.4	0.2	1	23	336	360	336	360	0.98
9	16	0.0012	0.31	13.3	0.1	2	23	362	384	361	384	0.89
10	16	0.00036	0.094	15.0	1.0	1	23	390	414	390	414	0.96
11	16	5.9e-06	0.0015	20.6	6.3	1	23	420	442	420	442	0.99
12	16	4.7e-07	0.00012	24.0	0.8	1	23	448	470	448	470	0.99
13	16	4.9e-05	0.013	17.7	0.2	1	23	476	498	476	498	0.98
14	16	0.0044	1.1	11.5	0.2	1	23	504	526	504	526	0.97
15	16	0.00011	0.029	16.6	4.6	1	23	532	554	532	554	0.99
16	16	5e-05	0.013	17.7	0.8	3	23	562	583	560	583	0.97

Sequence Information

Coding Sequence: ATGGCAACGCAAATAAAAACCGAAAATGAAGCTCGAACTCAAGGTGCTATAGAATACAAATCTTCTATAGCACCTaactttgaaaataatcaaatcGATTTAACCGATCGTGATAAGATTCAATTAAATCTAAATGATGCTGtttttcgAGGGAAATGTCTCCTTGAGATACATATGCGCGTCCACACTGGAGAAAAGCCATTCAACTGCACGCTTTGTGGAAAAAACTTCCGACAGAAAGCTGCTCTCAAGACGCACTTATTAAATCACACGAAAATAAAACCGTTTAAGTGTGATCAGTGCGAACGAGCCTTCGGCTCCCAAAAAGATCTAACATCTCATTCCTTGATTCATTCGTGTGAGAGAAAATTCAATTGTGAAGTCTGCAATAGAAATTTTATATctgaaaaaactttaaaatatcaCAGAGCTCGACACACTAGGGGATATCCATTTGGATGTGATATTTGTGCGATGCGATTCTGCTATATGCATCTACTTCGACGACACATGCTTACTCACACTGGCGAGAAACCATATAAATGTAAATACTGTAGTAAGGAATTTCGACAAAGACACGAATCTGTTGTACATATGCAAACACATCCAGAAGCCAATGAAGACAAAGATAAGCCATCACTTCAACAGGTGCTGGCACTGATAAACTCTTTGCCCAGAGAAGGTGATATGTGTGAATCCAAAGAAAAACCTCTGGCACACTCAAACGAAATCAATGGACACCAATCCATTGAAACTCCTAGTTTTTCTATCACAGAATTTAAATCTTATGATGGAGAACACCCCCACGTTTCTactgaaatggaaaaaaatgaacacaatgaagacataaaaacaaatttagacTTTTctgaaatcaaagaaaaatcgGTACCCATGGCAAtggaatttcttaaaaaatttatttgcaaatgTTGTGGTGCTCGCTTTGCTTTGCAAAATACCTTAAGTCATCACGTGCGACAAAATAAATGTTCTCAAAAGCATTTTACATGCCCCAATCTGAAATGTAAAAGGGTGTTTGCCTCTCAAGAAAAACTTGATGCTCATATTCTTACTCATACATATTGTGATTTATGTGGCCAATCCTTTAGTAGCAGTGAAGAAATCGAAGCACATAAAGCAGAACAACACAATTTGAAAGTTAAACATCCTTGTCCGCATCCTAATTGCAATAAAGCTTTCTATAAAGGTGGTCAGCTCGAAAAACACATTGAAACCCATAATATTAAAAAGGAATTCCAGTGCACGCTTTGTGATAAAAGCTTCCATCGAAAATTTTATCTCACACAACATATGAATCGTCATACAAAAACACGACCATTTCAATGTGAACAATGTTCGAAAGCCTTTTATAGCTCCGGAGAGCTTCAAAGACATATTATGAGACACACTGGCGATCGTCCGTTTCCATGTGATATGTGCAATAAAACATATCCCTTAGCAAGCGAACTAAGAGTTCACAAGCAATCTCACTCAGGTGAGAGACCTTTTGCTTGTGAATTTTGTCCGATGCGATTTGGATTTGCAAACGTTCTTAGGAAACACCTTATAACGCACACTGGTGAAAGATCCTTCAAATGTAACATTTGCGGACGAGGATTTGTACACAGACAAAACTGCGAAGACCACATGAAAACTCATTCGGGCGATAAAGAATACGGCTGTGAGATTTGTGAAGCAAGATACTACACAAAAGATTCTTTACGaaaacatatgaaaaaaaatcacaaaaatattCCACTTATCGAAGACAATGttactgaaaatatgagttag
Protein Sequence: MATQIKTENEARTQGAIEYKSSIAPNFENNQIDLTDRDKIQLNLNDAVFRGKCLLEIHMRVHTGEKPFNCTLCGKNFRQKAALKTHLLNHTKIKPFKCDQCERAFGSQKDLTSHSLIHSCERKFNCEVCNRNFISEKTLKYHRARHTRGYPFGCDICAMRFCYMHLLRRHMLTHTGEKPYKCKYCSKEFRQRHESVVHMQTHPEANEDKDKPSLQQVLALINSLPREGDMCESKEKPLAHSNEINGHQSIETPSFSITEFKSYDGEHPHVSTEMEKNEHNEDIKTNLDFSEIKEKSVPMAMEFLKKFICKCCGARFALQNTLSHHVRQNKCSQKHFTCPNLKCKRVFASQEKLDAHILTHTYCDLCGQSFSSSEEIEAHKAEQHNLKVKHPCPHPNCNKAFYKGGQLEKHIETHNIKKEFQCTLCDKSFHRKFYLTQHMNRHTKTRPFQCEQCSKAFYSSGELQRHIMRHTGDRPFPCDMCNKTYPLASELRVHKQSHSGERPFACEFCPMRFGFANVLRKHLITHTGERSFKCNICGRGFVHRQNCEDHMKTHSGDKEYGCEICEARYYTKDSLRKHMKKNHKNIPLIEDNVTENMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01318424;
90% Identity: iTF_00974972;
80% Identity: -