Cfes028537.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- -
- Assembly
- GCA_963931855.1
- Location
- OZ007555.1:108874132-108874482[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.5e-09 4.7e-06 28.0 0.0 1 38 15 52 15 56 0.93 2 2 4.9 3.5e+03 -0.4 0.0 19 27 64 72 64 73 0.86
Sequence Information
- Coding Sequence
- ATgccaaatatttataaaagaaaacacCTTGAAACAGTCCTAGATGAAGAAGCCCTCAAAGAAGCAGTTAACGATATAAACCGCAAAATTGTAACGTCAACAACTGCTGCGCGGAAATATAACATAAGCAGAACGACCCTTTTGTATCGCTTAAAGCTTTTATCGAAAAATCGTATCCCGAGCAATCTACAAAGCAGGGCTAGCACCAAATATTCTTTATGGCAAGTCCTCACCACGTCACAAGAAAAAGAGTTGacagattattttaagaagtgCTCAAATCTTCACCATGGGCTGACGTTTGATGTGGCTAGGCGATTTGTTAACAACCATGCTGTAGaaataatgtaa
- Protein Sequence
- MPNIYKRKHLETVLDEEALKEAVNDINRKIVTSTTAARKYNISRTTLLYRLKLLSKNRIPSNLQSRASTKYSLWQVLTTSQEKELTDYFKKCSNLHHGLTFDVARRFVNNHAVEIM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253817;
- 90% Identity
- -
- 80% Identity
- -