Cfes050416.1
Basic Information
- Insect
- Chrysotoxum festivum
- Gene Symbol
- GIP_2
- Assembly
- GCA_963931855.1
- Location
- OZ007556.1:181252122-181268406[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7 2.7e+03 -0.0 0.0 11 19 264 272 254 273 0.65 2 2 1e-17 7.3e-15 56.2 0.0 2 45 796 840 795 840 0.96
Sequence Information
- Coding Sequence
- ATGAAAAGGAATATCACTCCATTTAATGGGGAAAATTACAGTATTTGGAAATTTCGCTTGAGAGCTTTAATCGCCGAAGAAAACTGTCTTCACGTTTTGGAGGAGCCAGGTGAGAATAGGAATTCAGGAGAATGGCGAAGAATGGAGAGAGTGGCAAAAGGGTGCATCATAGAGCACTTGAGCGACAGTATGATTGGAATGATCACCGAAGAGAAGACAGCTttcgaaataattaaaaagctcGACGAAATTTTTGAAAGGAAAAGTCTAGCCACTCAATTGTCGGTGCAAAAGAGGCTTTTAACTTTCAAATTTAAAGGTGACATACCACTCATggaacattttataaaatttgatgaGATGATGATCGAACTACAGGCCGCAGGAGCTCAAATCAACGAAATGAATAAAGTAGCGCAGTTATTGTTGACGCTGCCTTCTTCTTACGATGGAATAGTGACAGCCATTCAAACTCTTGCGGAAAATGATTTGACTTTGGCGTTTGTGAAGACCAGACTGCTTGATtatgatattaaaataaaacaagaatatcGAGATACATCATCAAAAGTGCTCCAGATTGAAAATAATCCAAATATTAAACCGCAAAACAATTTCAATGCtcgaaaaCTGGACCAACCTTTGGAAATCGGTGTAGCTAAGGAAAACATAACGCTGCAAGTTAACGCAAAAGGATCAATAGATGTGATGACAAAAGAAGGCGTTCGAGGAGTAAtcgaaaatgttttatattcaCCAGACGTACCGTATAATATCCTTTCTGTTAGTCGGATCCAAGAAGGAGGAATGTCTGTACACTTTGAAGACAATGGAGAAGTGactcTTTTCACAACGAATCCATGTCAACATCCAATTGTCATACTAAAAGACGTTCAATACGACGATCTGAAGACAATGGTAGATTTTATGTACTACGGTGAGGTGAATGTGTCGCAAGAACAATTGCCGCACATTCTTAAAACGGCTGAGATGCTTAAAATCAAAGGTTTAGCCGAGATGCCCACCGATGCGGCGACTCTTACAAAGTCCGATAGTAAATCGTCGTCCGATCAGCCGGATCAGCTGCAGAGCAGTGGGACTGATTCTTTGTGGGGTAGTTCGGAGTCACAATTTCAACAGCAACAACCACAACCACATCATCATCACCACCATCATCAGCAGAGTCAAACGCAGCAAATGCACCAGCTTAGGAGATCACCTTCGCCGCTTGGCACTGGTACCTCACCAGCCACACGAAGGAAACGGCTAAGAAAGTCATCAAATAATGGTTCGGGTGATCGAATTACGGATGATCACAGCGGAGTTGATACCGGAGGTAATATCAACCTATCCCAAATGGGTCAAATGTCATTTGGTGGCAATTCAAGCGGCCTAGGCCACActttacatacaaaaattataaaggagTCAACAAGTGTTGATGTTGATAGTCATCAGCAAGACTCTTCCCCCGATAGCTTAGACGATGGTAATGGCCATCCTCATACTATGCAAATCaaaccCGAAACGGATCTGAGTGTACCACAAACCCTACCCTTGGATATTTCTGGAGGCACCACTCCTTCAGAGCATGATGGTCCAAACGCCAGTTGCTCACAGTCATCGCATTCAGGTCTGCAATGGACGGTCGTTGATTCGAATTATTCCCGATTTTCGCTGTCGTCTTGTCAGCCCAATTTAATTGGTAATGGCAACACAAACAATCCAAACGGAGGATTGAGTAATCAatcaaccaacaacaacaacccaAGCAATACTGGAAATCAGAATACAACGGAccatcagcaacaacaacaacagcaacaacagcagcagcaacaacagcagcagcagcaacagcaacaacagcatCGACAACAGCAACAAAACACAAACAATTCAAATGGCAACAATTCCAGTGCAACTAGCGGACTCAGCCACACCCAACAACAACCGCAGCATGGCCACATTCAAATGCACTACACAAACTCCTCGTATTCGCCACAAATCATTTCCGTCAATAGTCTAGTGGGCAGCTACTCGCAGAATCTATCGACGCCAACGTCGCCAAATGAGTCGGCAATGGTGCAATCGGTGTACAGTCAAGGGCCGACACCAACCCAATCGCCAGTCCATCAGATGAACACAGTTCCCTCGGGACTGACGACGACAAGCGCCACAAATAACGCCGGCTCTGGAAGTGGTACAGGTAATAGTGCCAATGGCAATAACACCGGCAACAGTGGGCCGCTGGCCACTACTGTGGTTAACACAGCTGGTAACAGTGGAACAGGTGTAGTCAACAACAGCCAAGTCCAATCGGGCAGCCAAACCACACAAACAACTATAGTAGTTAAGCGCAAGCGCTCTGTAAATCCCCAAGGTGACGAGAACTTTATTCGAGCCCTGGAAGCGGTGCGATCGGGCGGAATTGGCTTTTGCAAAGCTGCCCGTCTCTACGGAGTGAATAACCGAACCCTATGGTTAGAGTACAAGAAAAGAGGTTATCCCATTAGTCGACCGAGCATAAAGAGTCGTGTAGTCAAGCAGGAAAATCTCTCACCGTCGCCGACGCCCACCAACGAGGAAACAACGATCGAAAATTACGAGCACATTAACCAGTCAGCTATTAACATGCAAGTTCCTCCCACATCGGATACGCCCACGCCACTCATGTGTACCCCGCACACTCATCCCATGGGCGTGATGGGCTTCCTTGACACAAGGCACATGGACTTCCCGACCAGTATACACACAATGTCACGCCAGCGCTACGTCGATAGCGGTGTAAACGTTAATCCTTCTGCAATGAATCTGCAAAGTATTAACTTTAATTCCATTTAG
- Protein Sequence
- MKRNITPFNGENYSIWKFRLRALIAEENCLHVLEEPGENRNSGEWRRMERVAKGCIIEHLSDSMIGMITEEKTAFEIIKKLDEIFERKSLATQLSVQKRLLTFKFKGDIPLMEHFIKFDEMMIELQAAGAQINEMNKVAQLLLTLPSSYDGIVTAIQTLAENDLTLAFVKTRLLDYDIKIKQEYRDTSSKVLQIENNPNIKPQNNFNARKLDQPLEIGVAKENITLQVNAKGSIDVMTKEGVRGVIENVLYSPDVPYNILSVSRIQEGGMSVHFEDNGEVTLFTTNPCQHPIVILKDVQYDDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPTDAATLTKSDSKSSSDQPDQLQSSGTDSLWGSSESQFQQQQPQPHHHHHHHQQSQTQQMHQLRRSPSPLGTGTSPATRRKRLRKSSNNGSGDRITDDHSGVDTGGNINLSQMGQMSFGGNSSGLGHTLHTKIIKESTSVDVDSHQQDSSPDSLDDGNGHPHTMQIKPETDLSVPQTLPLDISGGTTPSEHDGPNASCSQSSHSGLQWTVVDSNYSRFSLSSCQPNLIGNGNTNNPNGGLSNQSTNNNNPSNTGNQNTTDHQQQQQQQQQQQQQQQQQQQQQQHRQQQQNTNNSNGNNSSATSGLSHTQQQPQHGHIQMHYTNSSYSPQIISVNSLVGSYSQNLSTPTSPNESAMVQSVYSQGPTPTQSPVHQMNTVPSGLTTTSATNNAGSGSGTGNSANGNNTGNSGPLATTVVNTAGNSGTGVVNNSQVQSGSQTTQTTIVVKRKRSVNPQGDENFIRALEAVRSGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKSRVVKQENLSPSPTPTNEETTIENYEHINQSAINMQVPPTSDTPTPLMCTPHTHPMGVMGFLDTRHMDFPTSIHTMSRQRYVDSGVNVNPSAMNLQSINFNSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00335230;
- 90% Identity
- iTF_00335230;
- 80% Identity
- iTF_00335230;