Ccae038099.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- stc
- Assembly
- GCA_963971475.1
- Location
- OZ020569.1:45012198-45015466[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 1.9 4.5e+04 -4.0 1.6 15 19 332 336 331 336 0.81 2 14 0.053 1.3e+03 0.9 0.2 4 10 365 371 364 373 0.95 3 14 1.2e-06 0.028 15.8 15.3 4 19 379 394 377 394 0.93 4 14 0.01 2.4e+02 3.2 10.7 3 18 432 447 430 448 0.91 5 14 0.77 1.8e+04 -2.8 1.4 8 13 453 458 452 459 0.79 6 14 1.8e-09 4.4e-05 24.8 15.5 1 19 488 506 488 506 0.98 7 14 7e-05 1.7 10.1 16.9 4 18 554 568 547 569 0.88 8 14 0.0064 1.5e+02 3.9 9.3 1 11 609 619 609 620 0.96 9 14 4.5e-10 1.1e-05 26.7 15.5 1 18 636 653 636 654 0.97 10 14 1.2 3e+04 -3.4 0.6 6 10 683 687 682 688 0.78 11 14 2 4.8e+04 -7.3 9.2 10 18 701 710 690 711 0.77 12 14 2.1e-08 0.0005 21.4 13.9 1 17 747 763 747 772 0.93 13 14 4.2e-07 0.01 17.2 14.0 1 19 779 798 779 798 0.96 14 14 0.64 1.5e+04 -2.5 0.1 8 12 814 818 813 818 0.80
Sequence Information
- Coding Sequence
- atgTCCGACCTAGCGTCTTCGGACACGAATGATATGAATGGGAATGGCTACATTGATTTCAATCAATTCATTCTACAGCATAACTTTAATCGAgcatatgaaaataatttggcACAATATCATCAAGTATATGGATATGGATTGGATCCGGTCGTTTCTTACGAAGCAACTAATTATGATATAAATGCTAGTAACAATTACCATCATGCTTCTAATCATAATCAGCAAAGTACATCATCACAACAAAATGATATTGTTGCATCATCAAATCTCATTCCAACAGCAGCAGAGTTTGTACCAAGATTTGGGAGTTTGTCACTTGAAAACGGAGATCGTGAATTTCCGGTACAACCATCTACCAGTAATCCATTCTCAGTTCGTAATGAGGGCGGACATAAAAGTTCGGAGAATAATAATGTGAATTCAAGGAAGAACAATCAGGCTGCGCGTAACAACAACACTGGGGCAATTCGAAAGAACAACTACTATCAAAATCGCAATAGAAATCATGACCAAAGGTACTCAAACGACAGTCAATATCAGTTCTTTTCTAACTACTATCGTGGCAGTGGTTTCTGCAATCATAACAAGAACAAGCAATACGACCATCGTAACTCCAGGCGTCGGGACAATAGAAAAGTTCATGATGGCTATGGGTATAGGAACTCGCATGATACCAGCGATGAAAATTCCATTGAAAATGGTTTCAATCAAAATGGAGATATGTCTCCGAAAAATGGAATACATTCCCAaaatcacaatgaaaataaatctcATGCAATTCAGATTAAATCACCTGAAGAAAGTGACCAGTTTTCTCAACGAGAAAAACTGATTCAGGAAATTGAGGGTAGGAAACTTGAATGTCTTGTGTGTGTTGAGAAAATCAAGACACATCAATCGATTTGGTCATGTACGAACTGTTTTCATATATTCCATTTGTTGTGCATAACCAAATGGGCAGCAAGTTCAAAATCTGAAACAGGCTGGAGATGTCCTGCCTGCCAAAATACTACCAAGAAGGTTCCAAAAGATTACTATTGCTTTTGTGGTAAAGTCAAGAATCCTCAATACAATCGAAGTGATGTAGCTCACAGTTGCGGAGAGGTGTGTGGTCGAAAGGAACTTTGCGATCACAGTTGTACACTACTTTGTCATCCTGGTCCATGTCCACCATGTCAAGCTACTATAACACGTAAATGTGGATGTGGCAAGAAAAGTCGTATGATGCAATGCTGTCTCAAAGAGGAGTTTGTTTGCGATCAAATTTGCGAGAAATTACTGAATTGTAAAGTTCATTCTTGCTCTAAGGAATGTCATAATAGCGAGTGTGATGAGTGCGAAGAGAAGGTTGACCAAAAGTGCCACTGTGGGAAAGGTGAACGGCAAGTTGCATGTACTGCAGACTTGATCGAAAATAAGTTCTATTCTTGTGGTAAAACCTGCAATCGAACTCTATCCTGCGGTAACCATAAATGCAAAGATTCTTGCCATCCTGGTGATTGCAAACCATGCAAATTAGCCCCGGGTACAGTAATAACGTGTCCATGCGGTAAAATGCCCATTGAACCAGGATCTAGAACTTCTTGTATGGATCCGATTCCGCTTTGTGCAAATGTATGCGACAAGGTGATGAAGTGCGGACCACCAGCTTCACCACATCATTGTACGAACAAATGTCACAATGGTCAATGCCCACCATGTAACAAGCAAACTGCTGTAAAGTGTCGATGTGGTCATATGTCTCAAATGGTCAAGTGTCGACAACTATCAACAAGAGCTGACGATGCACGTTGTAAGAAACGGTGCACCAAGAAAAGAAACTGCGGGAAGCACAAATGTAACCAAGAGTGCTGCATTGATATTGATCACATATGCCCACTACAGTGTAACTACAGTTTGTCGTGCGGAAAGCATAAATGTGACCAACCATGCCATCGTGGCAACTGCCCACCATGCTATAGAAGCTCATTTGATGAACTTTATTGTGAATGCGGTGCAAGTGTTATCTATCCTCCTGTTTCGTGCGGTACAAAGCGTCCAGCTTGTTCCAAACCATGTTCACGATCTCATCCATGCAGTCATCCTGTGACTCACAATTGCCATTCAGCTTCCACTTGTCCACCGTGCGTAGTATTCACAACTCAATGGTGCTACGGAAATCATGAACAGCGCAAAACTATTCCATGTTCCCAAGAGAGTTTCAGCTGCGGATTGCCATGTGGTAAAGAATTACCCTGTGGACGGCATAAATGTATCAAACCGTGCCACAAAGGTCCTTGCCAAACTGAAGTTGAGATTTGCAAACAAAGTTGTGCTACTCTAAGGAACATGTGCGGTCACAAATGTATGGCTCCTTGCCATAATGGTGATTGCCCCGAAACACCTTGCAAGGAAATGGTTGAAGTTGTATGTGAGTGTGGTCACAGGAAACAAATGCGCACTTGTCATGACTTTTCAAGTGAATATCGTCGATTCGTTACAGCACAATTGGCTTCGTCTATGCAAGAAATGCAACGTGGGGGATCTATCGAACTCAGTGACATAATGGGACCTATGAAGATGTCGAACAACAAGACTCTCGAATGTAATGACGAATGCAAGACTATGGAAAGAAATCGTCGCATTGATTTGGCTCTGCAAATTCGAAATCCGGACTTaccatcaaaatttttaaccaaATATACTGATTTCATTCGTGGTTGGGCTAAGAAAGATCCTCAACTCGTCAAAATGATTCATGAGAAGCTCACAGAACTTGTAAAATTGTCCAAGGAAAGCAAGCAACGTTCTCGGAGTCATTCATTTCCTACAATGAATCGTGAGAAGCGTCAGCTGGTTCATGAAATGTGCGAAGTGTTTGGTGTAGAATCAGTCGCATATGATGCTGAACCTAATCGTAACGTTGTAGCTACTGCCTACAGAGATAGATCATGGTTGCCTGCAGTGAGTGTAATGGAAGTCTTACAACGTGAAAGTGGGCAACGTCGTGTACCAGTCCCGACCAACAATGCTTGGAGAATGAAGAAATAA
- Protein Sequence
- MSDLASSDTNDMNGNGYIDFNQFILQHNFNRAYENNLAQYHQVYGYGLDPVVSYEATNYDINASNNYHHASNHNQQSTSSQQNDIVASSNLIPTAAEFVPRFGSLSLENGDREFPVQPSTSNPFSVRNEGGHKSSENNNVNSRKNNQAARNNNTGAIRKNNYYQNRNRNHDQRYSNDSQYQFFSNYYRGSGFCNHNKNKQYDHRNSRRRDNRKVHDGYGYRNSHDTSDENSIENGFNQNGDMSPKNGIHSQNHNENKSHAIQIKSPEESDQFSQREKLIQEIEGRKLECLVCVEKIKTHQSIWSCTNCFHIFHLLCITKWAASSKSETGWRCPACQNTTKKVPKDYYCFCGKVKNPQYNRSDVAHSCGEVCGRKELCDHSCTLLCHPGPCPPCQATITRKCGCGKKSRMMQCCLKEEFVCDQICEKLLNCKVHSCSKECHNSECDECEEKVDQKCHCGKGERQVACTADLIENKFYSCGKTCNRTLSCGNHKCKDSCHPGDCKPCKLAPGTVITCPCGKMPIEPGSRTSCMDPIPLCANVCDKVMKCGPPASPHHCTNKCHNGQCPPCNKQTAVKCRCGHMSQMVKCRQLSTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPLQCNYSLSCGKHKCDQPCHRGNCPPCYRSSFDELYCECGASVIYPPVSCGTKRPACSKPCSRSHPCSHPVTHNCHSASTCPPCVVFTTQWCYGNHEQRKTIPCSQESFSCGLPCGKELPCGRHKCIKPCHKGPCQTEVEICKQSCATLRNMCGHKCMAPCHNGDCPETPCKEMVEVVCECGHRKQMRTCHDFSSEYRRFVTAQLASSMQEMQRGGSIELSDIMGPMKMSNNKTLECNDECKTMERNRRIDLALQIRNPDLPSKFLTKYTDFIRGWAKKDPQLVKMIHEKLTELVKLSKESKQRSRSHSFPTMNREKRQLVHEMCEVFGVESVAYDAEPNRNVVATAYRDRSWLPAVSVMEVLQRESGQRRVPVPTNNAWRMKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -