Ccae031270.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysops caecutiens
Gene Symbol
nfxl1
Assembly
GCA_963971475.1
Location
OZ020568.1:80541434-80544712[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 2 4.8e+04 -7.9 5.6 15 19 176 180 175 180 0.81
2 15 0.15 3.7e+03 -0.5 0.8 4 10 211 217 210 217 0.95
3 15 1.2e-08 0.0003 22.1 16.7 1 19 225 242 225 242 0.99
4 15 0.00045 11 7.5 13.4 3 19 280 297 272 297 0.80
5 15 9.9e-10 2.4e-05 25.6 11.5 1 19 332 350 332 350 0.99
6 15 2.8e-07 0.0068 17.8 9.2 1 18 385 402 385 403 0.96
7 15 0.22 5.4e+03 -1.1 0.5 1 5 412 416 412 421 0.75
8 15 2 4.8e+04 -5.0 2.3 5 10 426 431 426 431 0.91
9 15 4.9e-07 0.012 17.0 16.2 1 18 437 454 437 455 0.98
10 15 1.8e-08 0.00043 21.6 13.3 1 19 464 482 458 482 0.85
11 15 0.011 2.7e+02 3.1 12.6 7 19 526 538 520 538 0.81
12 15 0.0092 2.2e+02 3.4 8.2 3 11 551 559 550 560 0.91
13 15 1.5e-06 0.036 15.5 6.8 1 11 629 639 629 640 0.96
14 15 0.051 1.2e+03 1.0 13.2 3 19 669 685 668 685 0.94
15 15 7.6e-07 0.018 16.4 13.3 1 16 736 750 736 756 0.86

Sequence Information

Coding Sequence
ATGTCTCATCGTCTGAATAAGAAAAGTGGTAAATCCAATCAAAGAGTGAACATTGGTGGTAAACCGAAACAGGAAAGTATAGGCCTCAAGCCGgaaaaaatagaaacattCAAGACTGCCGAAGAGAGATTGGAAGAAATccattcaaaaaatatagCAAAAGCAAAGGAACTGGCCGTTTATGAGTCCAGCTCGGAGGAAGAAGAGCTTGATAGAGGCACTTTTCTTGCAAATGTATTCAGGGGTTATTCGGGAGAACGTAATCAATTGGTTAAAACTCAGAACATTTTAGAAGAAACTCTTCAATCAGGATCTGCAATTTGTTTGATATGCATCGGTTCTATAAAGAGGAATGACTCGATTTGGTCCTGTTTACTATGCTATTGTATATTTCATCTAAATTGTGTAAAAAAATGGGCAAATGATAGtatatttcaacaaaaatcaacttcaaatgAAGTGCAAAGGTATTACAACAATAGTGGCGAACTCATATTGAAAGTACCGAAGCCTATTCGATGGTGTTGTCCTAAGTGCCGTACAGAATATGAACCTGAAGAAGTACCACGTGAATATACTTGTTTCTGTACAAAGGAGATAAATCCACAATACCAGCAGTGGCTTGTACCACATTCATGTGGGGAAACATGTAGTAAATTGCTTAAACCAGAATGCGGTCACAAATGCATGTTGCTATGCCATCCAGGACCATGTCCACCGTGTCCACAGAATGTCGTGAAATCTTGTCTGTGCGAGAAATCTCCATTCAAAACAATAAGATGCTTTCAAAAGTCTTGGAAATGTAATGTCAAGTGTGGACAGCTTCTTAAATGCAAGATCCATGTTTGTGAGCAAATTTGTCATCCTCAAAATAATTGCCCACCGTGCACCAAAAAAAGTATTCAAAAATGCTTATGTGGAAAACAAAGCTCTGAACGGAAGTGCTCCGAACTTGTGTGGCAGTGTAATAATATCTGTAACAAATTTCTCCAATGCGGAAGACATAGATGCGAAGAATTTTGTCACAAAGGTGAATGTGCAGAATGTCCATTGGGACTTCCACGTGCATGTCCTTGCGGAAAAACTAAATCAGTTGCTCCATGTAGTGATATTGTCGAACCTTGTGGAGACACTTGTCAAAAATCCTTACCCTGTAGCTTACATTTTTGCACTCAACGATGTCACAAAGGAGAGTGTAGCCCTTGTCTCATCTTCGTGGAGAAAAAGTGCCGATGCGGTTTGCATACAAAAGAAATGCCTTGTTCGAAACAATTTACCTGTGAAACAAAGTGTAAATATAAAAGAGAATGTGGAAAGCACGTTTGTAGCAAAAAGTGTTGTGATGGTAATTGTCCTCCGTGTGATAAGGTTTGTGGTAAATTATTATCTTGTCGAAAACACAAATGCCAATCGATTTGTCACGATGGACCCTGTTATCCATGCCAACTTCAATCTACAGTAAAATGTCGTTGCGGCTCATCTTGTATATCTGTTCCATGCGGGCGTGAAAAGAAAACCAGACCACCGAAATGCAACCTTCCATGCAAATTTCCCTCAAAATGCCATCATACAAACCCTCACTTTTGTCATATGGGGGAATGTCCACCTTGTACACAAACATGTAATTTGGAAAATGATATATCAAAGTGTCAGCACCGGTGTCAAGCCAAGTGCCATAATGCAGTTCGTGTTATAAATACTCAACGAAATGCTGCAAACATATGGAGTCTGAGTATGGAAGAGTACGTTATAAAAAAAATGCCTCATCCACGTTGCGAAGTCAAAATAAATGTGGTATGCATTGGTGGTCATGAAACTGAATTCAGACCCTGTTGGGATTCAAAGCCTAGATCTTGTGGCCGCCTTTGTGGACGTACATTGATATGTGGTAATCATAAATGTGAGAAAATATGCCATGCTGTAGCTGATTTGAACAATTCTCAgCAACAAGTAGGTTGTATGAAATGTGAACTGGGATGTGTAATATCACGTCCTAAAGGATGTATTCATCCTTGTCGACGATCATGTCACCTTCCACCCTGTGTACCTTGTTCGGTAACAATTAAAACAGCATGTCATTGTGGATTAACGCAAGTCTATTATAAATGCATAGAATTTTATCAACAAATAGAAGATGGAAAAATTCTCGAAAATATTCAAGAAAAGTTGAAAAGCTGTGGAAATCCATGCATTAAAACGTTCCCATGCGGTCACAGTTGCACTTCAGTATGCCATCCTGGTGACTGTCCTAATCCTGAAAATTGTCAAAAGAAAGTCAAAGTTTATTGCAATTGCAAGAcgtataaaattgaaacaacttGCAACAAACACCGTGCTGGATTAGTAGTTCCTTGTAATGAAAAGTGTATGATTCGAAAGCAGAGGGAAGAAGACATTAAAATGCAGGAAGAAGCTAAGAAGAAACTTCTCGAAGAAGAACGAAATCGACTGGAACTAGAACtgtttgagaaaaaatttgGAAAGAAAAAGCCAagggaaaaaaggaaaattacgGAAAATAAAGATACAAATTACTCTTTGAAAATATGGATAATATCGGCCAGTTTTGTGGTCATTATGAGTGTAATTCTTGTAGCGATTTTGTATAGATAA
Protein Sequence
MSHRLNKKSGKSNQRVNIGGKPKQESIGLKPEKIETFKTAEERLEEIHSKNIAKAKELAVYESSSEEEELDRGTFLANVFRGYSGERNQLVKTQNILEETLQSGSAICLICIGSIKRNDSIWSCLLCYCIFHLNCVKKWANDSIFQQKSTSNEVQRYYNNSGELILKVPKPIRWCCPKCRTEYEPEEVPREYTCFCTKEINPQYQQWLVPHSCGETCSKLLKPECGHKCMLLCHPGPCPPCPQNVVKSCLCEKSPFKTIRCFQKSWKCNVKCGQLLKCKIHVCEQICHPQNNCPPCTKKSIQKCLCGKQSSERKCSELVWQCNNICNKFLQCGRHRCEEFCHKGECAECPLGLPRACPCGKTKSVAPCSDIVEPCGDTCQKSLPCSLHFCTQRCHKGECSPCLIFVEKKCRCGLHTKEMPCSKQFTCETKCKYKRECGKHVCSKKCCDGNCPPCDKVCGKLLSCRKHKCQSICHDGPCYPCQLQSTVKCRCGSSCISVPCGREKKTRPPKCNLPCKFPSKCHHTNPHFCHMGECPPCTQTCNLENDISKCQHRCQAKCHNAVRVINTQRNAANIWSLSMEEYVIKKMPHPRCEVKINVVCIGGHETEFRPCWDSKPRSCGRLCGRTLICGNHKCEKICHAVADLNNSQQQVGCMKCELGCVISRPKGCIHPCRRSCHLPPCVPCSVTIKTACHCGLTQVYYKCIEFYQQIEDGKILENIQEKLKSCGNPCIKTFPCGHSCTSVCHPGDCPNPENCQKKVKVYCNCKTYKIETTCNKHRAGLVVPCNEKCMIRKQREEDIKMQEEAKKKLLEEERNRLELELFEKKFGKKKPREKRKITENKDTNYSLKIWIISASFVVIMSVILVAILYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
-
80% Identity
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