Ccae039583.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- pnr
- Assembly
- GCA_963971475.1
- Location
- OZ020570.1:8087026-8101993[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1 8e+03 -2.1 0.1 1 6 62 67 60 69 0.67 2 3 0.74 5.9e+03 -1.7 0.2 8 14 478 484 477 488 0.85 3 3 1.9e-16 1.5e-12 48.3 4.3 1 35 598 631 598 632 0.98
Sequence Information
- Coding Sequence
- ATGATAGAATGTGAAGTGCTATCACAGGAAAGATCAAGATCACTCGGTGAGGAAGCACCCATATACGAGGATCTTAAAAATCTTGATCCAAGATCAGTAAACGCGTACTTCATAGGGGATGGTACAAAGGGCCTCGACCCAGTATTAAtaGTTTCACCAAATGATGGATTACCAGCAGTTATTTGCGAAGATTGCCGAACACAATTGGATACGTGTCACAGGTTTCGAAGGATTGCTAAAGAGACGCAGAAAAAATTACAAGGTTTCCTACAGTTCACCTCGAATTTAACTGGTAGTCCGCAGGAGATACTCGCTAAATCGTGTTTAACATTGGATGAAATTCTATTTCCATCATCGACACGGCAAGCATCAGAACGTACTGCTGCAGCGGCATTAACAGAATTAAGTAAAACAACAAACAGTAATAAAAAAGTTATAATTAACAATTGCTATAATATGAATAACGAGAGTTCAGCCACAACAACATGTTGTACAATATCACCGCCTTCATTAGTTACCTCAGTTATCAGCAAGAATCATATAGAAAAATTGGAAGCTAACTCAGTATCTGTGATCCCAATTGATAGTTTAAATGCATCAGTAAATATCAAATCAACAATAACGTCGACAAATATAtcgccaccaccaccaccagtGCCACCAGCACCAGTATCAGTATCAGCTATAGCTACAGTACCATTATCTGGATCAGGATCAGGATCAGGATCAGGATCGAcgtatttgaaaaattctcatgttcaacaacaaaatagcAGATCATCATCAAATCTAATAGGTTCTTCTTCATTTGGAGCAAGTGATTCAATAAATGTATCATCTACAAAAAATCTAACTCAAATCCAGCAACAACATTTAGAAACTGCTGCTGTATTAATGGATATTAGTAAGAAAGTTATTATTTCACCGCCCAGCTCGAATCCTCAATCGCCAGGCTTATCTGGTGCAGTTGACTCAAGTATTAATAATTCtgtgataaatttaaaacgcTCAACGAGCAATGAAGAAattgatttatcaataaaacgTCCACGTAAAGAAataaatgatattaataaaCGTGGCTTGTCGCCAACTGATGTTACTACAACAACAGGAAATGCACCACTAACAACAACATCCACAAGTAAAACAGCTGTAACATCAGcatcagcagcagcagcagcagcagttTTACACCAAAACTATGATGTAACAACGTCCAGATTGAATCGCAATGATATTGATCATGAAGATGATAGCAGTGAAAATAGTATGTCCAATGATAGCTCAGATTCAGGACGATTACAAATGGATATAAGCTCACAGGAACCAGATGAATACATTGGTCAAAATCAATCTAGTGAAAGAAATGATACTGGACGTGAAAGTCCAGATAGTATTACATCTGATGATCATGCAACTGATCCAGCAACAACACAATTATGGCGTGAACTTGCTCAAAGGACAGTGAATGGAGGTGGAAATGAAGCAACTCAAATATTACgacaaattataaattgtcGAACATTTGGATTACCTTTACCAGCACAATTGagtattcaaaataataatgcttCTTTGGATCAACCAATAGCTCTTGTCAAGgatgaaataataaagaaaGTCCAAGAACGATCGACAAGTAAAACATCAGGAAGACGAAAGCAATCTTGTCCTATTAAAGCAGAAAATTCTGAACAAAATGACATGCATACAGCAGACAATTCTATCCTATCAAATGAACAGCAAGGAAAAAACGTAAATGCAAATAACCAACAAAAGGACATGTCATGCACAAACTGTGGTACTTTAACAACAACGATATGGCGTAGAAATTTACACGGAGAAATGGTCTGTAATGCATGTGGAttgtattttaaattacaTGGAGTAAATAGACCACATTCAATGCGACGTGATACAATTCATACAAGAAGAAGACGACCAAAAGGTGGTGAAAAATCTGGAAGAAGaagaATTAAAGCCGAATCGAACACAACAGAAGCAGATAATTCATCTGATAAGAAACCTGATCTTCAAGCTttacaaaatcacaattttttaattgcCTTAGGAGGTGTGGCTCGGGGAGCATCATCATTTCCAATGCCTCATTACTCACATTTTATACGTGCCtcacaaaattttggaaaGAGTAATGTATCTACTGGTTCAAAAGGAACTCCAGAAGGGGCTACATCAATTAAACGTGAAGTTATATCACCATCACCACAAGATGATGGTAATAATAGTGAAACCGGAATAGAACAAGAAACATGTAGTAGTGTACCATTGAATCTCGTTTCAAACCAAATAGgtgctaataataatgaacCATCGCCTCAACGCTGA
- Protein Sequence
- MIECEVLSQERSRSLGEEAPIYEDLKNLDPRSVNAYFIGDGTKGLDPVLIVSPNDGLPAVICEDCRTQLDTCHRFRRIAKETQKKLQGFLQFTSNLTGSPQEILAKSCLTLDEILFPSSTRQASERTAAAALTELSKTTNSNKKVIINNCYNMNNESSATTTCCTISPPSLVTSVISKNHIEKLEANSVSVIPIDSLNASVNIKSTITSTNISPPPPPVPPAPVSVSAIATVPLSGSGSGSGSGSTYLKNSHVQQQNSRSSSNLIGSSSFGASDSINVSSTKNLTQIQQQHLETAAVLMDISKKVIISPPSSNPQSPGLSGAVDSSINNSVINLKRSTSNEEIDLSIKRPRKEINDINKRGLSPTDVTTTTGNAPLTTTSTSKTAVTSASAAAAAAVLHQNYDVTTSRLNRNDIDHEDDSSENSMSNDSSDSGRLQMDISSQEPDEYIGQNQSSERNDTGRESPDSITSDDHATDPATTQLWRELAQRTVNGGGNEATQILRQIINCRTFGLPLPAQLSIQNNNASLDQPIALVKDEIIKKVQERSTSKTSGRRKQSCPIKAENSEQNDMHTADNSILSNEQQGKNVNANNQQKDMSCTNCGTLTTTIWRRNLHGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGGEKSGRRRIKAESNTTEADNSSDKKPDLQALQNHNFLIALGGVARGASSFPMPHYSHFIRASQNFGKSNVSTGSKGTPEGATSIKREVISPSPQDDGNNSETGIEQETCSSVPLNLVSNQIGANNNEPSPQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -