Ccae040258.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- pnr
- Assembly
- GCA_963971475.1
- Location
- OZ020570.1:15539381-15541467[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6 4.8e+04 -6.3 4.4 1 8 359 366 359 380 0.62 2 2 3.3e-18 2.7e-14 53.8 6.5 1 34 414 446 414 448 0.97
Sequence Information
- Coding Sequence
- ATGGAAACTCAACAACAGCAGTTGGATAAGTGCGATCAAAAAGTTGAACCATTATCGCCGTCCAGAGAGGAAGAACAGCAGCAACAATCAGGACAAACTAGTCAACAGAATCAGAGTCAAGATCAACAAACACAACGATCGCAAGCAAATCAAGAATTGTTAAGATCAGAGTTGATCGATGGTTCTATCAAAATCCAAAGATCTGTTATATCTGGTCAGAGAAGGATTCTAACGACGGCCGGAACATTGAGAGAAGTGTCTGACATCGATTCGGAGGAGTATCAAGGATCTGAATTTGGACAGATGGCACCAAGAACAGAAGATCAGCAGACATATTCACCTTATGAAACTTCAGCAGGTTCAACAATAATTGTCTGTGAGGATCCGTCTGTAAAGTCTGAGGAACACGAGAAAtccattgaaaattcaacagCATCAACGGTCTACCAAGAAAGCTCCACTCCTACAGCATCTGCTGTTCAAGAAGCTGAACAAGAAGCGATTCGATATCAGAATCAGCAAACAAATCGATATGCTCgatatgaaaatattgaacaacaacaacaacagcaacaacagcaacaacagcaacagcaacagcagcaggCGTCTATAGTGTATTACAATGCAGCTGCTACACCTCGCTCAGAGTCAGCCATCAACACGCTTAGTGCAGAAGTGCCACAAGATGAGGCGAAAACTTTCACGAATTTAGGATCAATCCAACAGACAGAATACATATGTGGAAGTACATATGTCCCAACATCAAACTATCCATTTGTACAAAGTCCAGCAATCAAGGATTACCAGATTTACAACTCCAACAGTACAAATCCTTTGCTGTTTAAGGGTGATCCCACGTTGACGTCGGCAGTACGACCCAGTAGCCACTACAGTTCATTCCATCATGTCCCGAACGtcttgtacgaaaattcctcTGTGACTACATCAGATTCACCGTCTTACTTCTACGAGCTGCCAAATACGAGCTACCACGCAATCGCTGAGGACTACGGAGTCAACGGCCAATGGTCAAATTCGTTCGAATCACAAGCATCTACCTCTGAGTACCGCTGCACCACATGTACGTCGACAAATTTCCTGCGGAAGGAGAACGGAGAGCTACACTGCATGACATGTCTTCCACCAAATAGTCGCTTGCAGGGCGTAACTCGAGTTCCAGCACGTCAAACCAAACCAAAGATAACAGCATCAACTGGAAGACGCAATGGAGTCATTTGTGCCAACTGCAAGACGACATCGACCACATTGTGGCGTCGTAACAATGAAGGACAACCAGTTTGCAATGCATGTGGACTGTATTTCAAGCTCCACAATATGAACCGACCTATGAGCATGAAGAAGGACGGGATACAGAAGCGGAAACGGAAGCCAAAGAACAACAATGGTGGACATATCAAACCCCAAGTTGCAGGAATGATGGCATACCCAGAGAAGATCCTTCCACCAATGTTTCCCTCCCAAGTGCAGCATATGACCCACGACCTGAAAGTTCTGCCCCAGCAGATAACGTTAAGTTCTGGGGGAGAACTCCATTCTGCTGTGATCCATGGTGGCCAGCACATAGACATCGTACAGACGTCAGAACCACAATCACTATGTCTACCTCGTCATCAGAACGTTGTGGTGTCAAGTGAAGACCACACACCGCATGGACACTACCGCTACGAGAAGACGATTCCTCAGAGTCATTCGCCACATTTGCCGAATTCAGCGACTCTCAGTCGCCACATCGCACAAACTGTACCACCTCTGAACGGAACTCGCAGCTCCAACTCTGAAATAACAACTAGTGTCATCACAAGCACCGGGATCACAGAGCGGTCTTCCAATTAG
- Protein Sequence
- METQQQQLDKCDQKVEPLSPSREEEQQQQSGQTSQQNQSQDQQTQRSQANQELLRSELIDGSIKIQRSVISGQRRILTTAGTLREVSDIDSEEYQGSEFGQMAPRTEDQQTYSPYETSAGSTIIVCEDPSVKSEEHEKSIENSTASTVYQESSTPTASAVQEAEQEAIRYQNQQTNRYARYENIEQQQQQQQQQQQQQQQQQASIVYYNAAATPRSESAINTLSAEVPQDEAKTFTNLGSIQQTEYICGSTYVPTSNYPFVQSPAIKDYQIYNSNSTNPLLFKGDPTLTSAVRPSSHYSSFHHVPNVLYENSSVTTSDSPSYFYELPNTSYHAIAEDYGVNGQWSNSFESQASTSEYRCTTCTSTNFLRKENGELHCMTCLPPNSRLQGVTRVPARQTKPKITASTGRRNGVICANCKTTSTTLWRRNNEGQPVCNACGLYFKLHNMNRPMSMKKDGIQKRKRKPKNNNGGHIKPQVAGMMAYPEKILPPMFPSQVQHMTHDLKVLPQQITLSSGGELHSAVIHGGQHIDIVQTSEPQSLCLPRHQNVVVSSEDHTPHGHYRYEKTIPQSHSPHLPNSATLSRHIAQTVPPLNGTRSSNSEITTSVITSTGITERSSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -