Ccae004621.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- bab1
- Assembly
- GCA_963971475.1
- Location
- OZ020567.1:28457324-28459414[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9e-12 4.9e-09 37.1 0.0 4 45 400 441 397 441 0.92 2 2 0.55 9.1e+02 1.1 0.8 4 20 532 547 531 547 0.91
Sequence Information
- Coding Sequence
- ATGGGTAGCAGTGAAGGACAAACATATTGCCTACGATGGAACAATCACAAATCAAATCTAGTAGAAATACTAGATGCATTGATTAAGATGGAAAGTTATGTGGATTGTACCATTGTAGTTGATGATCAAGTACAATTCAAAGCTCACCGTGTTGTATTAGCTGCGAATTCACCATATTTTCAATCAATACTTCAAGATGTACCAATGGATCATTGTAGTATTCTGTTTCCTGGTGTACAAGCATTTGAAATGCGTGCCTTGTTGGAGTACATGTACACTGGTGAAGTGAATGTTACACAAAGTCAAATTcctaaaattatgaaaattgctGAACAACTTGAAGTTAAGGGCTTATATGATATGACAGAtttaaaagataaatttaataaatatgatGATCCAATGGCACACTATTCACCAACATCatatcagaataataataataataacaataataatatcaataacaGTAATAGCAacatcaataataataataatataaataataataatagtagtaataatagtagtaatagtaatagcaataataacaACAGTGACAAAACTTGTGAACCACAACAATCATCTCCTGTTATATCAACATCAACTAGTGTAACAGCTACTGCTGCACAGAGTAGTAGTTCTTCACCACCGTATTCATATAAATCACCTTACACCAGTATATATTCAAAAAGTCCTGGTCCATCAACTTCTGATCGTCACTCTTCATGGTCAATGTCATCACATTTATCAAATCCAATTCCAagtgctgctgctgctgctatGTTAAGTTCAGTATATGAATCTGGACCAGATATGAATCCATTGAAGAGAAAGAAACTATCATCGATATCAAGCATGTTAATGTCCCGCGATACACCAATTCTAAGAAATGTTTTGGCTCAATCAAGTACACCAGATTCATCACAGCCAATGCCATTAATTTGCCAACCAATTAAAATGGAACGAAGTGGAGAGAAACAAAGTCCCGGTAGTTGTAATGGAGGATCGGAATTCAGTAATTCCGAAAGGAAGCCAAAATATGATGAACCACATTCACCGTACACAGATAAATCTTATGAAGAAGATCCAATGGATTGTAAGCAAGGATATCTGAGTGATTCTCGTATAGCTTCATATGTACCGCAACAACAGCAAAAACCCGAATGGAAGAGATACAAGCAGTATACAAGAAGTGATATCTTATCTGCAATTGAGTGTGTTCGAAATGGAATGAGTGCACTGCAAGCATCCCGTAAATTTGGTGTCCCTTCTCGAACACTCTATGACAAAGTTAAGAAATTGGGTATCACAACTGGACGACCAATGAATCGAACTGTTAAACGCAGTCCAAGTAGTAGTGGCAGTCCAGCAGGTTTTCCGTATGGATTGAGTGGTTCGAGTCATCATTATGGACCTAGTGAACACATGCTTCAAATGCATGAAGCAGCTGAAAGAGAAAAAGAACGAGATCACAATTTACCACCAACTATTCCTCATCCAGCCGCAGCCTTACTTGATCCATCTTTCTTGCAACAAGCATTCGAAAGTCGTGGAGGAGATATTGCTGGTCGTGAAGCTTTACATGCTATGGCATTAGCAGCAGCTGCCCACGCAGCTGTTAATGGAATTTCAACCAGTCCAGGAACAAATGGTACTGCCCGTTCACCAAGTCCCAGTTTGTCTATGAAATACATTCGACCACCCAGTCCTAACGACAGAAATATGGATCAGGAAAGTCTAGAAGAAGATGAAGATAGAGTTGAAGATTTATCTATTGGCCGAAAGGAATTACATTCACCTCCTTTAACACCTACCCATCACTCGCACAGTCAATCGATGTCGCATTATTCTGAACGAgatcagcaacaacaacagcaacagcaacaacaacaacaacaacagcaacaattaCAAACTGGTGTCATCGTTCCACCAATGACCAAAATATCCTCAAATGAAGATTACAACACCTCAATGCGTCATGAAGCTGGTTCGATTGCATCCGATGATCCCAGGGACTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQAFEMRALLEYMYTGEVNVTQSQIPKIMKIAEQLEVKGLYDMTDLKDKFNKYDDPMAHYSPTSYQNNNNNNNNNINNSNSNINNNNNINNNNSSNNSSNSNSNNNNSDKTCEPQQSSPVISTSTSVTATAAQSSSSSPPYSYKSPYTSIYSKSPGPSTSDRHSSWSMSSHLSNPIPSAAAAAMLSSVYESGPDMNPLKRKKLSSISSMLMSRDTPILRNVLAQSSTPDSSQPMPLICQPIKMERSGEKQSPGSCNGGSEFSNSERKPKYDEPHSPYTDKSYEEDPMDCKQGYLSDSRIASYVPQQQQKPEWKRYKQYTRSDILSAIECVRNGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTVKRSPSSSGSPAGFPYGLSGSSHHYGPSEHMLQMHEAAEREKERDHNLPPTIPHPAAALLDPSFLQQAFESRGGDIAGREALHAMALAAAAHAAVNGISTSPGTNGTARSPSPSLSMKYIRPPSPNDRNMDQESLEEDEDRVEDLSIGRKELHSPPLTPTHHSHSQSMSHYSERDQQQQQQQQQQQQQQQQLQTGVIVPPMTKISSNEDYNTSMRHEAGSIASDDPRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00334292;
- 90% Identity
- iTF_00334292;
- 80% Identity
- iTF_00334292;