Ccae030098.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- ttk
- Assembly
- GCA_963971475.1
- Location
- OZ020568.1:66490994-66495152[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-17 5.1e-14 53.1 0.0 2 42 495 536 494 539 0.95
Sequence Information
- Coding Sequence
- ATGTCCGTACAACAATTCTGTTTGCGGTGGAATAATCACCAACCAAATTTCATATCAGTGTGTTCTTCATTACTTCACAATGGAACACTAGTCGATGTCACATTAGCCGCTGAGGGGAGACAGCTACAAGCTCATAAAATAGTACTTTCTGCTTGCAGTTCATATTTTCAgAGCCTGTTTACAACCAATCCATGTCAACATCCTATAGTTATTTTAAAAGATGTCCAGTACAATGATCTTAAAACAATGGTAGACTTTATGTACTACGGAGAAGTGAATGTGTCTCAGGAACAGCTACCACACATATTGAAAACTGCTGAAATGTTAAAGATAAAAGGTTTAGCCGAAATGCCGGAAGCAGCAGCTTCGCTAACCAAATCAGAGAGTAAATCATCATCTGATCCAACAGAACAAATGGCTGGCACTGGTAGTGGATCAGATTCAATATGGGGCAGTACAGAATCGCAATTTCAACATCACCATATGCATCATCAAccgcaacaacaacagcagcaacagcaacaacaacaacaacaacaacagcagcaacaacaacaacagcagcagcaacaacagcaacaacaacatcaacaaacTCATACTTTAACACAACATCAACAAAGAAGAACGCCATCTCCAAATAGTGCCGGTATATCACCTGCAACAAGAAGAAAACGATTAAGAAAATCATCAACTAGTGgTTCAACAGAACAAACATCAGAGGAACAAAGTACCATTGAAGTAGCTGCAAACATGAATATATCACAAATGAACCAAATGTCATTTAGTGGAACCTCAACGAATTTAGCCCAAAACAttcatacaaaaataattaaagaaagtTCTAGCACCGACACTGATACTCATCCTCATGATTCTTCTCAGGAGAGCATTGATGACTCAACAGCTCATCATCATATTCaacaaattAAACCAGAATCTGAATTGAGTAATGTACAACAGTCTATACCATTGGATATTTCCGGGTCAACAACACCATCAGAACAGGATACAGCGTCTGCTACTTGCCCTCAAACGCAATCTTCACATTCAGGTGTGCAATGGACAGTTGTCGACTCAAACTATCCAAGATTTAGTTTATCAGATGCGCATCCAAATGCAACggaaaataatagtaatacatCAAATGGTTCACAACAAAATGTTAGTTCTTCATCAGTTGTAGCGACAAATCAACAGGCGCATATCCAAATGCATTATCAAGGGGGAACATATACACCTGAAATAATATCAGTTAATAATCTTGTCAGCAATTATTCTCAGAGTCTTTCGACACCAACATCACCATCAGATTCAGTGATGGTACAATCGGTTTATAGTCAAGGACCAACACCAACACAATCTCCAGTTCATCGAATTACTGCTGGtgataatataaataatgcGAATAATTCACATAATCAAACAATACCAACGGCAATAGTACCACCAAAGCGTAAAAGATCAATAAATCCACAAGGTGatgaaaatttccttcaaGCTTTGGAAGCGGTAAGAACTGGTGGTATTGGTTTTTGTAAAGCTGCACGTATATATGGAGTTAATAATCGCACGTTATGGTTAGAATATAAAAAACGTGGATATCCAATATGTAGACCTagtataaaaaatcgaattaaaCTAGAACCAAATATATCACCGCCACCaccaacaacaccaacaaatGAGGAAACAACTATAGAAAACTATGAACATTTAAATCAACAAGCGATTAATATGCAAGTTCCTCCAACATCTGAAACTCCAACACCAATTATGTGTCCTCCACATGCACATCCAATGGGTGTAATGAGCTTTTTAGATACAAGACACATGGAATTTCCTGGAGGTATACATACAATGTCCAGACAACGATATACAGAAAATACTGTTAATGTCAATTCCACAGCAATGAACTTACAAGGACTCAATTTCAATTCTATGTAA
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQSLFTTNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPEAAASLTKSESKSSSDPTEQMAGTGSGSDSIWGSTESQFQHHHMHHQPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQTHTLTQHQQRRTPSPNSAGISPATRRKRLRKSSTSGSTEQTSEEQSTIEVAANMNISQMNQMSFSGTSTNLAQNIHTKIIKESSSTDTDTHPHDSSQESIDDSTAHHHIQQIKPESELSNVQQSIPLDISGSTTPSEQDTASATCPQTQSSHSGVQWTVVDSNYPRFSLSDAHPNATENNSNTSNGSQQNVSSSSVVATNQQAHIQMHYQGGTYTPEIISVNNLVSNYSQSLSTPTSPSDSVMVQSVYSQGPTPTQSPVHRITAGDNINNANNSHNQTIPTAIVPPKRKRSINPQGDENFLQALEAVRTGGIGFCKAARIYGVNNRTLWLEYKKRGYPICRPSIKNRIKLEPNISPPPPTTPTNEETTIENYEHLNQQAINMQVPPTSETPTPIMCPPHAHPMGVMSFLDTRHMEFPGGIHTMSRQRYTENTVNVNSTAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00334272;
- 90% Identity
- iTF_00334272;
- 80% Identity
- iTF_00334272;