Ccae030663.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- bab1
- Assembly
- GCA_963971475.1
- Location
- OZ020568.1:74137000-74138298[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.3e-17 3.8e-14 53.5 0.0 1 43 28 71 28 73 0.95 2 2 0.28 4.7e+02 2.0 1.3 2 15 165 178 164 192 0.69
Sequence Information
- Coding Sequence
- ATGTGGCAAAAATGCTGGaatacaaatcaaaatttaatgcaTCATTTGCGATTTCGAGAACGTGGCCCACTAAAATCGTGGCGTCCAGAAACAATGGCTGAAGCTATTTTTAGTGTACTAAAGGAGGGTTTATCTTTGTCACAAGCCGCCCGGAAATATGACATTCCTTATCcaacatttgttttatatgCAAATCGTGTCCATAACATGTTAGGACCGTCCATAGATGGTGGAGCTGATTTAAGGCCTAAGGGACGTGGTAGACCGCAACGTATACTGTTGGGTATATGGCCAGATGAGCATATTAAAGGTGTGATAAAAACAGTTGTATTCCGTGATGCTAAGGAGTTAAAAGAAGAAACAATTCATTTAGCGTATGGAAGACATTCGcCTGTATACCCCTTCCAGGACAGTGCGCTTAACTATCCCGGAGCACCCTGCTCGAATGGTCTGCCACCTCAACCACAGGTATCTGTAGGTGAATCAATGTCACCGGAAGCTACAGCTGCTGCTGTAGCAGCAGTCGCTCAGGGGATACGACAGCAAATGCAATTAGCAGCTGCAGCTCAACATCATCCTGATGCAGCTACAAACTTATTTAGCTTACCATCGCACTTACATTCAGCAAACAGTGGCGTGCCGTTACCAAAGCAAAGTTCACCTGCATCAAGTGGCCAGAATATGAACTCAAATTCACAAAGGCATTCGTCACCATCAATGCCGGTTCTTCCTAGTCCATCTGCTTTAGGTATGACAGGTATTCCGGGTGTACATGTTATGCAACCCATTGGCCCAAACACTAGTCAATCGGGAGCACCTATAAGTAGCTCAACATCATATACTTCCAACAGTTTACAAACATCGTCAGCTTCCGCTCATATGACACCTAACACATCAACAGCCAATGTACAAATGAATGTGTCAAACATGTCACGTATGGGATCACCATCGGAATCAGCGCACGACCTACGTATGAACAGTCCGGAAGAAAGTCCACTTAATTCACCCTTACAAATGGCGCTGGAACCAGCCGTTAACTTAGCAGTAGGTGTAAGTGGTATGGCATATAAGCCATCAAGAGGCTATTCTCCACCAAGAgctgaaaatttatttcaagaagATATTGCAGATTTAGTGGGTGCAGCTAATCGTAACTGTCCGCAAAATATGAACAGTTTCAAAGAACCAACACCCACAATTAAACTTGAACCTATGGCCGGTTGTAGAAGTGATTAA
- Protein Sequence
- MWQKCWNTNQNLMHHLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSIDGGADLRPKGRGRPQRILLGIWPDEHIKGVIKTVVFRDAKELKEETIHLAYGRHSPVYPFQDSALNYPGAPCSNGLPPQPQVSVGESMSPEATAAAVAAVAQGIRQQMQLAAAAQHHPDAATNLFSLPSHLHSANSGVPLPKQSSPASSGQNMNSNSQRHSSPSMPVLPSPSALGMTGIPGVHVMQPIGPNTSQSGAPISSSTSYTSNSLQTSSASAHMTPNTSTANVQMNVSNMSRMGSPSESAHDLRMNSPEESPLNSPLQMALEPAVNLAVGVSGMAYKPSRGYSPPRAENLFQEDIADLVGAANRNCPQNMNSFKEPTPTIKLEPMAGCRSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -