Ccae032095.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- Mblk-1
- Assembly
- GCA_963971475.1
- Location
- OZ020569.1:8112209-8115043[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-15 3.2e-12 47.3 0.1 1 45 11 56 11 56 0.94 2 3 2e-18 3.3e-15 56.9 0.0 1 43 486 529 486 531 0.95 3 3 7.6 1.3e+04 -2.6 0.0 27 36 752 762 752 767 0.78
Sequence Information
- Coding Sequence
- ATGTCAGCGATAACTGGTCGGCGTACATATACCGAAGAAGAGCTGCACAGTGCGCTACAAGACATCATGAGTGGAAAATTAGGTACGAGACGTGCTGCTGTACAATACGGTATACCAAGATCAACATTACGAaataaagtttataaaatttcaacagaACAAAAACGTGGTGGTGTACCGGGATACAATCAATCAGTATTGGATCCACGAATTGATccggatgatgatgataaagaTCTTTCGGGTGATGATGAGAAAGATGACAAACTTCTGGCAGCAGCGTTGGGAGCATCATCAGCTGATGATTTGTCTAGATTTGCATCGACTTTGCATAAAATGAACAAAGTGAATGATACCAGTCAATGTATGGATGTTAAGCCACCATCATCACTGCCTCTAGAGGCTCAAGTCAAGTTGCAACAGGCAACAACACCGCAGCCACAAACGCCACCAATAACACCGAATGCATGGTTTGATTCTCAAGTTTTGTTCCAAAGTCTATTGCTGTCCGGTGGACTAGGTGGTATTCCGGGACTGCAGCATCAGCAGGAGTTATTGAAGGAACATCTGAAAAACGCAACAGGACTTAGTCACGAGTctttattgaataataaacaaattatgtCAGATCCAATGCTTCTCATGCCTTTGCTACAACTCCatcagcagcaacagcaacagcaacagcaacattCACATCATTCTCAAAAATCATCAGTGCAACATCAACACCAGCAACATCAAcatcagcaacaacagcagcaacagcagcaacaacatcACTATCAGAATCGATCAAGAAAATCTGAGACACCAGAGACAGCATCATCAATTGATATGAACGAGATGAGCGATGATCCATCGGTTATACTAAAAATTCCGTCCTACAAGCCAGTAGCAGGAACCTCTTCATCTGGAAAGAATGGAGACGGTCTCAATTCGCCAGTACCACAAACAACTCCTCCAATAATGACAAGAAGTCCACAGCATGTAAATAGTTTGCCTTTACCTGGTATATCACCACCCTTAGCCCCAGTACCAGGTGGTAGTGAATCCCAATCACCACCAATAGCATCTGGTAAGACAACATTATCATTGCGTGAAGTTATTGCAAAGAGTATTTGTCACACTTTCAACCAACAAGCAAACAATGATccaaatattcaaaatcaaataaaatcttcTAAATCCCCAATGGTGGAGCCATCGATGGATCAAATGAATCGTGCTACAATATCAGTGATAAAAACACTTGGAAGTACACGTTTTGCATCCACCCCCAATCTATTAGGGAATAATTCTAGTAGTAGCACAAGTCATTCGCAAAATGCATCAATGAATCAAGTgattggtggtggtggtggtccAGGTAGTGGTGGAGCTGGTGTTGTTGGTGGTATCGGTGGTGCAGGTGGTAAAGGAACAAGACCAAAGCGTGGCAAATATCGTAATTATGATCGTGATAGTTTAGTTGAAGCTGTTAAAGCTGTACAACGCGGAGAAATGTCTGTACATAGAGCTGGAAGTTATTATGGTGTACCTCATTCAACTTTAGAATATAAAGTTAAAGAAAGGCATTTAATGCGTCCGCGAAAACGTGAACCAAAACCACAACCACTAGACGAACGTATTTCGGCTGTAAGTAGTTTagataaacaaacaaaatcacaaGGAGTTGTACAAAAGTCAGCTATGAAAAACCCACCATTCCCTAGTAGTACATCACCAAATGGTATGAAAGTACCAATATTTGATCCAGCTATGGCAgcacaatttcaatttacatcTCAACTATTTTGGCCGCATTCATCAGCATTTGGTGGTATACCAATTGATTTTGCACGTGCTGCAGCTGCTGGTAATCCAAATGCAGCTGCTGTTGCAGCAGCAGCCGCAGCAGCAACAGCATTTCCATCAAATTCAGAAAGTTTTATAGCATCACAAATGATGCAGAGATTTCATGAAGATTCAAATAGATTGAATGCAACAAATAATATGAATCAAACAACAgtaacaacaccaacaacaacaccaacaacaccAACAGCAGTAACACCAACACCTaatcaaacaacaacaaattgtAATAAATCATCGTCGTTATCATCGTTATCGTTATCATTATCGAATAGCGGAAATACACCACCTGTTAAAAGTGCACGAGAATTAGCTGAAAGTTTATATGATGGTCCAAATTCGAATGGATTATTCTTAGATGGAATCATTCGGCAAACATTAGATCGTAAGGCAAGTGATGTACCACATGCTACATTATTAGATCAATTGGTTAAAAATACAAGAACACCAACAATCAATATGAATGATGATCCATCGATAACATCAACTTGCTTACAATCAGCTATAACAGGTAAAACAAAACGTTCCGGCAGTCCTTTACCCTTCTCAGTTATGGATATAAAACGTGAACGATCAAGTCCATCAACATCATCTTGTGATCCTGGTGATCGTGTAACTCCTATTGAACGTGACATATCAAGAGAATCTGTTGAAAGTCTACTTAAAATGCGTGATGGATTAACATTAAAAGTTGACAacacacaacaacaacaacaacagcaacagcaacattttcaacaattaCACAATTCTCATCTTCATGTTCAACATCATTCCCAAATGTCTGGGACAAGTTTAAGGCAATTATCCATTGAAGAATTAAATGGTAGCACTATGAGTAGCATACATGATAAGTTAGGTCAAATAAAGTCTGAACCAGAAGATATTTGA
- Protein Sequence
- MSAITGRRTYTEEELHSALQDIMSGKLGTRRAAVQYGIPRSTLRNKVYKISTEQKRGGVPGYNQSVLDPRIDPDDDDKDLSGDDEKDDKLLAAALGASSADDLSRFASTLHKMNKVNDTSQCMDVKPPSSLPLEAQVKLQQATTPQPQTPPITPNAWFDSQVLFQSLLLSGGLGGIPGLQHQQELLKEHLKNATGLSHESLLNNKQIMSDPMLLMPLLQLHQQQQQQQQQHSHHSQKSSVQHQHQQHQHQQQQQQQQQQHHYQNRSRKSETPETASSIDMNEMSDDPSVILKIPSYKPVAGTSSSGKNGDGLNSPVPQTTPPIMTRSPQHVNSLPLPGISPPLAPVPGGSESQSPPIASGKTTLSLREVIAKSICHTFNQQANNDPNIQNQIKSSKSPMVEPSMDQMNRATISVIKTLGSTRFASTPNLLGNNSSSSTSHSQNASMNQVIGGGGGPGSGGAGVVGGIGGAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPLDERISAVSSLDKQTKSQGVVQKSAMKNPPFPSSTSPNGMKVPIFDPAMAAQFQFTSQLFWPHSSAFGGIPIDFARAAAAGNPNAAAVAAAAAAATAFPSNSESFIASQMMQRFHEDSNRLNATNNMNQTTVTTPTTTPTTPTAVTPTPNQTTTNCNKSSSLSSLSLSLSNSGNTPPVKSARELAESLYDGPNSNGLFLDGIIRQTLDRKASDVPHATLLDQLVKNTRTPTINMNDDPSITSTCLQSAITGKTKRSGSPLPFSVMDIKRERSSPSTSSCDPGDRVTPIERDISRESVESLLKMRDGLTLKVDNTQQQQQQQQQHFQQLHNSHLHVQHHSQMSGTSLRQLSIEELNGSTMSSIHDKLGQIKSEPEDI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -