Ccae040810.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- kn
- Assembly
- GCA_963971475.1
- Location
- OZ020570.1:21450275-21458841[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.2e-51 5.1e-47 161.8 0.0 11 135 125 236 117 270 0.89
Sequence Information
- Coding Sequence
- ATGATTGCGTTCAACGCATCCCAACGGCATTCCCGGTGTGTGCGGAAAATCCCTCTCGTACCGATACGTAATTCCATTCAATGTGTTCGTACCAGCTCGACGTCAAGCGTATGCGTCAACACAACACAAACTACACGATGCGATGAAGATGATGACGTTGATGATAATGTGATGCTGATGATACCGACGAGCTTCAAACTGCGTTCCGACGAACCAGTGCCGGGTTTCAGTTCGGCCTCACCATGGCCAACGTTGGAACTCGAATGGGGGAGGAAATTGTATCCAACAACTGGACCACGTGCAGCTAGTGGTCTTATGTTTGGTCTACCACCAACTGGAGGTGATTTGAATCAACCACGTGGTCCAGTTACATCGTTAAAAGAGGAGCCTCTTGGTGCGAGAGCATGGATGCAGCCAGCTGATCAAACAAACTTGGGAATTGGACGTgcacattttgaaaaacaacCTCCGAGCAATTTACGCAAAtcgaatttttttcattttgtcatCGCCCTCTATGACCGTGCCGGGCAACCAATCGAAATCGAACGTACCGCTTTCATTGGTTTCATCGAAAAGGACCAAGAGAGCGACGGACAAAAGACCAACAATGGCATCCAGTACAGGCTCCAGCTGCTCTATGCCAATGGTGCCCGCCAGGAACAGGATATCTTTGTCCGGCTTATCGACTCGGTGACCAAGCAGGACACACCACCCGGAAGGATAATATCCTTCAGAGTCTTCCATAAAATCTTGCCTCGAAGAACTGCACAACAGAAGCAAAAAGCAGAAAAAAAGGACACCAACTCATTCCGTGAGGATGTGTATCCAATATGGCCACCTGATGGTGATGGTGCGTGTGTCAGAAGTTACGATGTCAGTCAACCTGAAGTGGGCTTAATGGTGTCGTCTTTGTCGTCGAAAGGACACAGAATCAGGAAGTGTTCTGAAACAAAAAAGGACACTGTACAgaaatacaaacaaacaaaaaattgccGGATGTTTTTCCAATGGCTTCATTTAAATCAAGTCCTTGTTGTAACAATGGCCGCCACCATGTCCATCCATCGTGGCTTATCTTGGTCCTGTCGTGTCCAACTCACAGAATCGTCCATTTTCCATTCACCAGTAGTTACAGGATTCAGTGTACAAAAAACATTCCGAATACCGAAAAAATACTGTTTCCTGTTTGAGGCTAAAGCTCGTATCCTTGCAGCAGGATGA
- Protein Sequence
- MIAFNASQRHSRCVRKIPLVPIRNSIQCVRTSSTSSVCVNTTQTTRCDEDDDVDDNVMLMIPTSFKLRSDEPVPGFSSASPWPTLELEWGRKLYPTTGPRAASGLMFGLPPTGGDLNQPRGPVTSLKEEPLGARAWMQPADQTNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQESDGQKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQDTPPGRIISFRVFHKILPRRTAQQKQKAEKKDTNSFREDVYPIWPPDGDGACVRSYDVSQPEVGLMVSSLSSKGHRIRKCSETKKDTVQKYKQTKNCRMFFQWLHLNQVLVVTMAATMSIHRGLSWSCRVQLTESSIFHSPVVTGFSVQKTFRIPKKYCFLFEAKARILAAG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -