Ccae040812.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- kn
- Assembly
- GCA_963971475.1
- Location
- OZ020570.1:21480113-21483617[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-118 2e-114 384.4 0.0 205 385 1 209 1 212 0.99 2 2 6.2e-10 1e-05 25.5 12.4 422 503 212 295 208 326 0.74
Sequence Information
- Coding Sequence
- ATGAGACGTTTCCAAgtTGTGATAGCAACACAAATAACCGTTGAAGGACCATTACTCGCTATATCAGACAACATGTTTGTacataataattcaaaacatGGCAGACGGGCTAAACGTATGGACGCCACGGAAGGTACAGGAAATTCTCCCCTGGCCATTACGGGTCATCCCCTTGCGCCTGACAGTACGTACGACGGCCTGTATCCTCCTCTCCCTGTTGCAACGCCATGCATCAAAGCGATATCGCCCAGCGAAGGTTGGACAACTGGAGGTGCTACTGTCATAATTGTTGGTGATAACTTTTTCGATGGCCTTCAAGTTGTGTTCGGCACCATGTTGGTGTGGAGTGAGTTGATAACATCGCACGCGATACGAGTTCAAACTCCTCCGCGTCATATACCGGGTGTTGTTGAAGTCACATTGTCTTATAAGAGTAAACAATTTTGTAAGGGTTCACCGGGGCGATTCGTTTATGTTTCCCTTAATGAACCAACAATAGATTATGGATTTCAACGATTACAAAAATTGATACCACGTCATCCTGGCGATCCAGAGAAATTACAAAAGGAAATCATATTGAAACGGGCTGCTGACTTAGTTGAAGCTCTTTACTCGATGCCGAGATCACCCGGCGGTTCGACTGGTTTCAATTCATATGCTGGACAATTAGCTGTTAGCGTTCAAGATGGTACCGGGCAATGGACTGAAGACGAATACCAAAGAGCACAGAGCAGTAGTGTTAGTCCACGTGGAGGTTATTGTAGCAGTGCATCAACACCTCATTCATCTGGTGGTTCATATGGTGCTGCAGCAAATGGTTATGGACCAGCACCAAATATGGGTACGCTATCATCATCACCAGGCAGTGTATTTAATTCGACGTCGAGAGTTGGCGGTCTCGTTAGTGGATTCAATCCATTCGCTTTACCAACATGCAGTACACAAGGATACAGCACAAGTCCATTGGTCACATCATCGAAATAA
- Protein Sequence
- MRRFQVVIATQITVEGPLLAISDNMFVHNNSKHGRRAKRMDATEGTGNSPLAITGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGSTGFNSYAGQLAVSVQDGTGQWTEDEYQRAQSSSVSPRGGYCSSASTPHSSGGSYGAAANGYGPAPNMGTLSSSPGSVFNSTSRVGGLVSGFNPFALPTCSTQGYSTSPLVTSSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01116233;
- 90% Identity
- iTF_00642950;
- 80% Identity
- -