Ccae002761.1
Basic Information
- Insect
- Chrysops caecutiens
- Gene Symbol
- Arid5b
- Assembly
- GCA_963971475.1
- Location
- OZ020567.1:5970790-5978378[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.9e-13 4.3e-09 38.0 0.1 2 89 477 557 476 557 0.89
Sequence Information
- Coding Sequence
- ATGAATTACAAGAAGCACTATTACAAGAAAGATCAAGATCATTCGACTGTCGGCGGACCATGTGGTTTCCATGGGCCATACACATTCTACAAAGGTCTTCAGATAACTCCTTTCGGTTATATCCCGACAACAGTATGTTCGAATGGGACAGCTATTAAAACAGAGAATAAACACATTTTGAATGGAGTCAGTTCGTATAAGAGTACGTCACTTAGCAGCGGTTTAGACGGTGTTGAGGAAGATGTTAAGCCTAAAATTAACACGAGGAAAAGTGCTAGCGACAAATGGTCCGATGCAAATGGAAGATCAGCTCATACAGGGTTCACTAAACCTCTTATCCTCTCCCTTGGAGACTGCATTCCCGTTCGACCATGGTCAGATTCGCCAATCTCGTGCTTAGCGGAAATAAGGATGATCTGGCGGGATAGAAATGAACAGCGTCTACTTACCGGACTGCGACTCTACTTCCTGCCGGAGAATACGCCAATGGGACGAATTAGTCATGGAGAGgACGAAGTAGTTGCAATTAGTGAAAAGGTTATAATCCGTGCTGAAGACTTCCTCAACTGGGTCGATGATAAATTACAATGGAATTGGGGATTGGCTACACCTCACAACACGTCACCATCAAAACCCAGTAAGAAGAAGAACCATGTGACGCCGAATGATTTAGCAGAGAACGAAACCGAAACTAATCGGAGAAACATTACACTACGTAGTACGAGATTGGATTTTTCGGAtgtggaaaatgaaaagttatcagATTGGAACCTCTGCTCGAAAATAGCAGTACTAAGTTATTCAAGATATTGTCGATACAGAGCAACACTAAAGCGCCTCGAGACAGTTGAAGATGAGTGGCTTAAGAATTCCCTCGTGCGAGCCATATGTGGATTTTCGACAGACATCAAAGATCTTCGTGTTATGTTTTGCAAGGACACATTCGACTATCCCGAGCTGGAAACCCATGAACATCTTTGTAATCACTTAGCACCAAAACTGAAAGGACGTCCACGAGGGAGGAAAAAGAAGAGTCGTTCAGAGTCACCGTTCTCGCTGGGGAGACGCGGTGATTCCTGTAGTGATTCAAATGATTCggatatttcaatattttcaacgGGAAAGgcAATTCCGCAAACGTCCTATCGACCACCACATCTACGATTCAACCACAGGCCAGCTAGAAACAAGGTTGGGTCGGAATCGGAATACAAACCTAGTAAAAAGCTTATGGGCAAAAGGGAAGACTATTCGGATAATGAAAGTGAGACTGAATACTGCGAGAATGAAGATGTTAATCATTATCGTGTTGAAATAGTTAAGAAAACAGCTGACAAGGATAAGAAATTCCTGAATGCGAGGATCGCAAAACCAAGGAAGTTGTCAGAGAACAAAACCTTCTTACCGAATGCATGTGAAACACCGGAGGAAAAGTTTTTCCTACGGAAACTACACGAGTTTCATGTGAAACATAACAATGATGTACCAAAAATGGTTTGGTTTAGTTTAAAAGGTGTGTGCTTGTATGCTATATTTTGTCAGGTTAAGAAACTAGGTGGTTTTGATGCGGTTACACTTAAGAAACAATGGAAAACGCTATTTGGCGAAAGGAGCGGACCACATAATACAATAACAAGAAGAAAATACGAAAGAATCCTACTACCCTTAGAGCGTTCCGAACTTGTTACGAAAAAGCAAGTTAAAACTGAAATGAAAAGGGAAACTTTTTGTGTGGAAGATGTTAAAACGTCAAAACTAGAATCTcttaaaataacaattaagAAGGAAAAGAAATGTTGCCCGGAATTAAGTAGAGAAGATATGGCAGAAATTCAGCATAAAGTGAGATCTAAAATTTCATCGAATCCTGAATTAGATATAAAACCTTGTATTGCATCATTGTCACCATCGAGAGGTAGTCCTGATTCAACTGTTCAACTGAAACAAGATGATGACAGTCCGATATCTTTAACACCAGTATCGGTACCAGTCACAGTTATAGTCGATTCAGAAAGAGCCCGTTGTTCAACGACTATATCTTCGGATGACGAGAGTAAATCACCTCATTCTTCAAGTACAACAAATGCCTCAAAATCATCGTCACAGAAGATACAAATTCAACAACCGCATACAACAATAACAGTCCATCAAACAACAATTCATCCTCAAATGCATTCCAAGAGCAGTTCGTTACAAAGTCAAATAACAAACCAAATACAAATAACAAACCAAATTCAAATACAACAAATCACTGTTCAACCGGGTGCAAGTGGTACTGCATGCAGTGGAAAAGGATCAGAGTTTCGTTGTAACATTAAACAGGATTCAGATGGTCAAGAGGTTAAAATTGAACGCGACTCGAAAGGTAAACGACGCGCAAGTGATGAGGATTCACCGAAATCTCGAAGTGGACGATCTAAACCATTTGAGAAGGAGAATATACCCTTCATAGCAGCTGGTACAACTATAACACCAGTTCTATCAGCCTCTGCACCTGTTCCAAAGAAATCTCCTGAGATAATTGATCTTGTAGATAGTGATGGTGAGAATTGTTCAGTGCCACATAAAAATGTTAGTGCAACTAAATCATCGAGTGGTAGATCAAATTCATGCAAAGACAAGTCATTAATGCCTCCTGTTAAAAAACGTAAATTGGACATTCTACGAGAAGGTGGTCTGGAAGTAACTGCAATAAGCAATACACATGGTGTGATTTCAACTACTTCATCACTGCCAACAGCCGCATTAAGGATACCACCGCAAACATCAATACATCCAGTGCATATATATGATAATCATAAGTTCAATTTACCTCCAGCAACAAGTTTAACCATTCCAAGTTCGAATGAGGGACGTAGTAGTACACCAAAAATGAATGCAAGTAGTATGTTTTCGAATACGGGTAAAATATTTGGAAATCCAAAAGAAATCTTACCACAACCTCCTCCGCAAAATAAGTCTGATGAAATACTGGATTTGACGGTGAAGTCTCCTCTGAAGTTTCCACATTTAGAAATTCATCCGATATCTTCGGCTCGTCGAACAAGATCACCTCCTAAGAATGGTTCTGCTTCAGCTGTTGTGAATCTATCAAATCCAAGATCGAAATTACAAGATTCTGGATTGCAAATAACTCTAGTTTCATCGCAACAGCAACCAACATTGACACATGCACAGAATGTTCATAACTCACAGAATCACAATATCAAAAGAAAGAATCTAGATATTCTTCCAGTTTCTGTGATGCCACAATCTCAATCGAGGAAATCATCTTCTCAATCGTTAACATCACGACATGATCGTAAGAGATTATCAATGTCATCCTCAAGATCCTCAAGAGCAACACCTACACCACCAACAGAATCATCAAGAGTATCACAGCCATCACAACTAGCAGCAACAAATTTCCCAAATTCTAAATCAACTCCATTCCCATTTCCACAATTCATTCCACCATTAGCTGCACCAGCTCCACATCCCTTCCTACCAATGCTCAATCCAGTCTTCTTATCCAATTTATATGCCCAAACACCAAATCTATTCCTTCCCAATCAAATACCGCAGGAACTCTTGCAGTTATGTAAAAATTTACCATCAGAACCAGTTCCAATTTCAAAAagctaa
- Protein Sequence
- MNYKKHYYKKDQDHSTVGGPCGFHGPYTFYKGLQITPFGYIPTTVCSNGTAIKTENKHILNGVSSYKSTSLSSGLDGVEEDVKPKINTRKSASDKWSDANGRSAHTGFTKPLILSLGDCIPVRPWSDSPISCLAEIRMIWRDRNEQRLLTGLRLYFLPENTPMGRISHGEDEVVAISEKVIIRAEDFLNWVDDKLQWNWGLATPHNTSPSKPSKKKNHVTPNDLAENETETNRRNITLRSTRLDFSDVENEKLSDWNLCSKIAVLSYSRYCRYRATLKRLETVEDEWLKNSLVRAICGFSTDIKDLRVMFCKDTFDYPELETHEHLCNHLAPKLKGRPRGRKKKSRSESPFSLGRRGDSCSDSNDSDISIFSTGKAIPQTSYRPPHLRFNHRPARNKVGSESEYKPSKKLMGKREDYSDNESETEYCENEDVNHYRVEIVKKTADKDKKFLNARIAKPRKLSENKTFLPNACETPEEKFFLRKLHEFHVKHNNDVPKMVWFSLKGVCLYAIFCQVKKLGGFDAVTLKKQWKTLFGERSGPHNTITRRKYERILLPLERSELVTKKQVKTEMKRETFCVEDVKTSKLESLKITIKKEKKCCPELSREDMAEIQHKVRSKISSNPELDIKPCIASLSPSRGSPDSTVQLKQDDDSPISLTPVSVPVTVIVDSERARCSTTISSDDESKSPHSSSTTNASKSSSQKIQIQQPHTTITVHQTTIHPQMHSKSSSLQSQITNQIQITNQIQIQQITVQPGASGTACSGKGSEFRCNIKQDSDGQEVKIERDSKGKRRASDEDSPKSRSGRSKPFEKENIPFIAAGTTITPVLSASAPVPKKSPEIIDLVDSDGENCSVPHKNVSATKSSSGRSNSCKDKSLMPPVKKRKLDILREGGLEVTAISNTHGVISTTSSLPTAALRIPPQTSIHPVHIYDNHKFNLPPATSLTIPSSNEGRSSTPKMNASSMFSNTGKIFGNPKEILPQPPPQNKSDEILDLTVKSPLKFPHLEIHPISSARRTRSPPKNGSASAVVNLSNPRSKLQDSGLQITLVSSQQQPTLTHAQNVHNSQNHNIKRKNLDILPVSVMPQSQSRKSSSQSLTSRHDRKRLSMSSSRSSRATPTPPTESSRVSQPSQLAATNFPNSKSTPFPFPQFIPPLAAPAPHPFLPMLNPVFLSNLYAQTPNLFLPNQIPQELLQLCKNLPSEPVPISKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -