Basic Information

Insect: Chrysoperla carnea
Gene Symbol: Rreb1
Assembly: GCA_905475395.1
Location: FR997754.1:27996136-28033304[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.024 0.52 11.3 0.2 1 23 125 147 125 147 0.98

2 15 9.6e-06 0.00021 22.0 0.7 1 23 163 185 163 185 0.98

3 15 2.2e-05 0.00047 20.8 3.9 1 23 191 213 191 213 0.99

4 15 1.2 26 5.9 3.7 2 23 318 340 317 341 0.94

5 15 1.9 42 5.3 0.6 1 21 393 413 393 414 0.96

6 15 0.35 7.7 7.6 0.1 1 23 570 592 570 592 0.96

7 15 2.5e-05 0.00054 20.6 1.2 1 23 601 623 601 623 0.99

8 15 0.0039 0.083 13.8 3.1 1 23 629 652 629 652 0.97

9 15 0.0033 0.071 14.0 2.8 1 23 1110 1133 1110 1133 0.96

10 15 0.00034 0.0074 17.1 0.9 3 23 1442 1462 1440 1462 0.97

11 15 0.59 13 6.9 6.3 1 23 1468 1491 1468 1491 0.97

12 15 0.12 2.7 9.0 0.9 1 20 1540 1560 1540 1561 0.95

13 15 6 1.3e+02 3.7 0.8 1 23 1646 1669 1646 1669 0.90

14 15 0.076 1.6 9.7 0.5 3 23 1723 1743 1721 1743 0.93

15 15 0.062 1.3 10.0 5.9 1 23 1749 1771 1749 1771 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.024	0.52	11.3	0.2	1	23	125	147	125	147	0.98
2	15	9.6e-06	0.00021	22.0	0.7	1	23	163	185	163	185	0.98
3	15	2.2e-05	0.00047	20.8	3.9	1	23	191	213	191	213	0.99
4	15	1.2	26	5.9	3.7	2	23	318	340	317	341	0.94
5	15	1.9	42	5.3	0.6	1	21	393	413	393	414	0.96
6	15	0.35	7.7	7.6	0.1	1	23	570	592	570	592	0.96
7	15	2.5e-05	0.00054	20.6	1.2	1	23	601	623	601	623	0.99
8	15	0.0039	0.083	13.8	3.1	1	23	629	652	629	652	0.97
9	15	0.0033	0.071	14.0	2.8	1	23	1110	1133	1110	1133	0.96
10	15	0.00034	0.0074	17.1	0.9	3	23	1442	1462	1440	1462	0.97
11	15	0.59	13	6.9	6.3	1	23	1468	1491	1468	1491	0.97
12	15	0.12	2.7	9.0	0.9	1	20	1540	1560	1540	1561	0.95
13	15	6	1.3e+02	3.7	0.8	1	23	1646	1669	1646	1669	0.90
14	15	0.076	1.6	9.7	0.5	3	23	1723	1743	1721	1743	0.93
15	15	0.062	1.3	10.0	5.9	1	23	1749	1771	1749	1771	0.98

Sequence Information

Coding Sequence: ATGCAAGATTTGTATGGTGTTAGTGTTCCATTACCAATCAGTAATAAGGAAAATCAACCGGAAAATACATCAATATTACCAACATCCGGTTCATCGCCACCGCCAAGTAATCAAGATATAAACATGGACCGTACTACAATTGATACCAAAGATGAATACCAAATATCCACACGTTACCAACAACGTCGATTAATTAAGTCAACAACACCACAAAAAATCATCAAATACGAAGCCGAAGAAAGGGAAAATAATACTACAGTCAATGCAAACCAAACTGATGACGAAGATAATGACAAAAATGATGATATTGAAAATCAACAATCACAACAAGATACACATCATGATTCTCAACAAAACTCGTCAGTTACAAAATTTACATGTATGGTATGTGATTTACGTATTGATAATCAATCCGATTACATAACACATATCCGTGAACATGAAAACAGCAGCACAAAAAGTGGTGGGTCCGATGAAACCACACAATACACATGTCGAATCTGTCAAAAACAATTTAATACTAGTGCAAATTTAGAGCGACATTTACTTGTACATGGAGGTGAACGCCCATTTCGATGTAAAATATGTTCGATTACATTTACAACAAATGGTAACATGCATCGACACATGCGATCTCATGCCGAATATGAATCTGACGGTAGCACAGATAGTTCTACAACAAGTGCGGGTTCATCAACACGAAAATCACAAAGAATGAAACGTCGATTTGAGTTTAACAATAATAATTATAATAAACGTAAAGCTGATTGTATGGATTCTTCGGATGATGCAATGCCGCCAGCGACACATCGTCGTCGGTTAAAAACAATTAACAATAACACCATAAATGCATTACAAAAATTTCAATGTCCAGTATGCAATCGTGAAGATTTTGCATCTTTGAATGTATTCGAAACGCACTTGGAGGATACACATCCCGAATATCAAATAAAATGCGATCAATGTAATTTAATCTTTAAGAATCATCGAGTGTTAAATTTACATCGTTATATGAGTCATCATCTCAATAATGATACCTCCAATGAGAATAAAAATAGTATTATTGGGTTTAAAGATCTAACATTTGTTGATTTTTCAAGTGAAAAATTTCCAATAATTGCAAAAGAAGTATGTGAAAAATCATTCCATCGTGCAAGCAATGAAAATGATTTGAATTTTCAATGTACGAAATGTTTACATGGTTTTCCATGTGCAAGTGCATTAGAAATACATCAACGCGCTTGCTTAAATAGTGATTATTATAAGACGGGAAATTCTAGTGATAATAATGACGAACCACGCTCTGAAGAAGACATTCGTCGTTCAGATTTCTTTAATGGTTTAAAGTTACAAGATAAATCACAACAGCAAGCTGAACAACCACAAGAGCAAACACCAACATTTGTACAAAAAATACGTTTAAAGGAATGCTTATCACGCGACCCTTCGAGATCTCCATTACCAACAATGGATTCTACAAAAGATTTAGCTGATATTCAATCAATTATATCAGTGACAAGTGCTCAAAGTTTATTACAACAATTAACAACTCCTAAATGTATTCCTCCGATTCAATTGCCGTTATCGATGCAAATTACACCACCGGACTCAAACCAGCGTCATCAACAATCTCAAGAAAATCATCAAGAAGAAGAACAACAAGATCAATTTGCTTCAGAATTTCGTAAAATGAAACAAAAGGGTGAATTTCCATGTCGACTATGCTCGGCAGTATTTCCAAATTTACGTGCACTAAAAGGGCATAACCGTGCTCATTTAACCGGTAATGGAAATGGACCATATCGTTGCAATATGTGCCCGCATTCCTCAACTGATAAAGCTGCTTTGGTACGGCATATGCGAACACATAATGGCGACCGTCCTTATGAATGTTCGCTCTGTAATTATGCATTTACTACAAAAGCCAATTGTGAGCGACATTTACGTAATCGTCATCGTAAAGTCACACGTGAGGAAGTGAAACGTGCTATAATTTACCATCCTTCAGAGGATCCAACAAATGATGAAAGTTTGTCAGGATCAATTAAAGGTTTTACTCCACCAAGACGTAATAACGATGATTTGATTGCATCAAAATTGTCACAAATCTCAGAAGCAAAGCGTTCATTAATTTTCTCATCGCCAACTGTTGATAAAATTCCATCAACTGTTGCAAATCCTTTACAAATACCTGATTTCCGTACTGTTATGTCCAAAATACAATTACCAAATATGATTTTACCGAAAGATGATAATTTACCAGGAATTGTGAGGAATAATTTGGCTGCATTAAAAGATCACAGAATTTTACCAAAGATACCAAATGTGCTAAATTTATCAAATAATAATGACGATAATCGTATGATCCATACACCACCGATGGTATCAATGCCCAAAATTCAAGTGAAAGATGTTAACGAATTAAAGCAAATTCCACTTGAATTGGACACACCAGCCAAAAGTGATCATTCAGATTCAGAGCCTGAAGATACGTACTCAAACCATTCAAACCATTTGATGTCAACACCATTGTCACATTTTGTACGAGAAAGTCGTCCAATAGCTGCACCAATGGATTTAAGTATGGATGTTTTAGATTTAAGTAAAAAGAAACGAGACGTAACACCAGAGCCAGAAATTCAAAATCATGAAGATGATGATAATGATAGTTTAGACGAAGACGAAGCAAAACCACAAGATTTAACAATTAAAACAATGAGTCAAATGGCAGCGGCGGCAACACCTCCTCCGGCATCAATATTTGAAAAAACACAATTATTACTAGCACAACAATTACTGAAACGAGACACAGTAGTTCCTTCAGTGTTTCCGCCAAATTTCTATTCTAATTTTTATAATGCGAATACACGACCACCAACAGTGCCATCATTAACCACACCACCACAGTTTGGAAATTTCCCCGGAATAAATCCATATTTCTTACAAGCTCATCCATTTTTAACACCAACTGCATCACCACAAGATTTTCAAGAGATGAAAGAACGATTTCAAAAAGAATTTCTTGAAAAGTTACGTGGCTTACAAATGAGCGGTGGTGGTTTAATTATGGAACAATTAGCTAGCGAGAAATTGCAATCGTTTCAGCAAAAACAAGATCAAAATACTGATGAAAAGTCACCGTTGACCATTGATACAAATCAACCATTTAACAGTGATAATAATTCGCGTTCACCAATGAAGCAACAATCAACACCAAAAATGACTGAAAATATTATTTCTCATACACCAAATTCGGTGAAAATGGTTATTAAAAATGGAGTTTTAATGCCAAAACAAAAACAGAGACGTTATCGTACTGAACGTCCATTTTCATGTGAACATTGTTCGGCTCGATTTACGCTACGCTCAAATATGGAACGACATATTAAACAACAACATCCACAATTTTGGTCACAGCGTCAAAGATCCAATATGTCAGCTGGTGTGCCTGGTCGAAAACCATCTTTACAAATTTTACCAAACATTCAACAACAGCAACAAGCACAAAATTTTGATTTGCATAAAAATTTATCAAATTTACCGAATGTACCAAAAGAGATCCCACCAAATTTTTCTCTACCAACATTGAACGATTTAAATAAACAACAACCATTGTTAATTAGCGATCAAGTAAAATTCGCCATTTTAGCACAACAATTAAAACAACAGTCAATGAAACAACAGAATTTTTCGAATAATGTTGTGGTAAAAGACGAGAATTCACATGGAAATGATGATGAAGAAGAGAATGATGCTTTGGTGATTGATGAAGAAATCTCACAGCAAAGTGCGTCCACAATTGAACGTAACAATCAAACTTCTTCGCCATTAGTGATTAAATCTGATTTATTACCAACAATTTTGCCACAACAGCAACAGCAAAATGAACAAAAGAAAAATTTAGAAGAAAAGTTAAAAATGATACGAGAAAAATTATTACAACAAGAGTCAAATAAAAAATTTAATGAAAGCTTAGCTATAATGGATGAACAAAAACGTGAAGAAATTATTCGGAATGAAGATTTAGTACCTGTATCAAAATTATTAGATAATGCTGCTCAAATACCATTTCGTGAATATTTTCGGCGTGATACAGAAGATACTGAAACACCCTCCGAAGAAGAGGAAGAAGGATTTTTAGCTACAAGTGGTAGTACTAGTGAAGGAAATATTTCAGGCAGTGATGGCAATAGATCCGAATCAGAACATCAACATTCAAAGAATACATCAAACAACATAAAAGAAAATAACAACACCGAACAATCAAATGAAATGCCAGTTAAGAAAAAATCAGCATACTCATTAGCACCAAATCGTGTCATATGCCCATATTGTCATCGTAAATTCCCATGGTCATCATCATTACGCCGCCATATCCTAACACACACCGGGCAAAAACCATTTAAATGCTCACACTGTCCACTATTATTTACAACAAAATCGAATTGTGACCGCCATTTATTACGAAAACATGGCAATGTTGTGAATCAAACCGCATCAAATAATAATAATAATAATAACAATAATAATACGACTACACAATCGTCAAATGATCAAACAACTCCAAATGCGATTCCCACAACAAATTACATGATGCGAAATGTACCCGAACGCCCATTTAAATGTTCAACATGTCCCAGCTCAACATTTTCAACCTTAAGTAATCTAAAAAAGCATGTTTCGTGTAAACATAGTGGATCAACATCACCTACATCAAACAAAGGTGATGGAGACCGACCATCTGTTACGTCAGGTAGTGTTTATGATAGTCATTCTTCAGAAGATGAATACTCACGCGTTGAGAAGTTGATAAAAACTTACAAAAATGATAATTGGGATCAAAACATTAACAATAACACCGATTCATTGATAACAAATTCAACAACAAATGGAAATAATAATCCGGGAGCAACGCCACAAAATTCTGATTTACCATTTAAATGTCATTTATGTGACAGCTCATATGGTGAACGTCAAGAGGCTTTGGACCATATTAAAGATCAACATACCGCTGAATACGAATTATTGTTATCAAAAGGTGCGCTAGAACAATCTCAAATACATCACGAACAACATCAACACAGCATCGAAAATCATAGCGATGAACAAGATGATCAAATTCATTTACGTGGTAAATTCCCTGATTATGCTAATCGTAAAGTAATGTGTGCATTTTGTATGCGTCGTTTTTGGTCTGCAGAAGATTTACGTCGTCATATGCGTACCCATACTGGGGAGCGTCCGTTTTCCTGTGATGTATGCCGACGACGTTTTACGCTAAAGCATTCCATGTTACGTCATCGTAAAAAACATAATAATAATAATAATAATAACAATAGCGATGCTGAGACGACACCTTCAAATTTGACTACGAATAACAACGATGATAATAATATTCAAAGTAGTAGTGCTGGTGAAGAAACGGATTTAGAAAAACCTAGTGAAAATAATAATAATAATTTATTAGTGAAATCAACAGCTGCAGCTGAGGAGCCAGAAAGTGGTGGTAGTGATTTATTAAGTAATTTATTACAAATTCGTGATCGCTCAATTATTGATCAAGTTTTAGTATCATCCGCCGATGATGCTGCTAAATTATTAGGAGTAAATAAAAATATCGATTAA
Protein Sequence: MQDLYGVSVPLPISNKENQPENTSILPTSGSSPPPSNQDINMDRTTIDTKDEYQISTRYQQRRLIKSTTPQKIIKYEAEERENNTTVNANQTDDEDNDKNDDIENQQSQQDTHHDSQQNSSVTKFTCMVCDLRIDNQSDYITHIREHENSSTKSGGSDETTQYTCRICQKQFNTSANLERHLLVHGGERPFRCKICSITFTTNGNMHRHMRSHAEYESDGSTDSSTTSAGSSTRKSQRMKRRFEFNNNNYNKRKADCMDSSDDAMPPATHRRRLKTINNNTINALQKFQCPVCNREDFASLNVFETHLEDTHPEYQIKCDQCNLIFKNHRVLNLHRYMSHHLNNDTSNENKNSIIGFKDLTFVDFSSEKFPIIAKEVCEKSFHRASNENDLNFQCTKCLHGFPCASALEIHQRACLNSDYYKTGNSSDNNDEPRSEEDIRRSDFFNGLKLQDKSQQQAEQPQEQTPTFVQKIRLKECLSRDPSRSPLPTMDSTKDLADIQSIISVTSAQSLLQQLTTPKCIPPIQLPLSMQITPPDSNQRHQQSQENHQEEEQQDQFASEFRKMKQKGEFPCRLCSAVFPNLRALKGHNRAHLTGNGNGPYRCNMCPHSSTDKAALVRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHRKVTREEVKRAIIYHPSEDPTNDESLSGSIKGFTPPRRNNDDLIASKLSQISEAKRSLIFSSPTVDKIPSTVANPLQIPDFRTVMSKIQLPNMILPKDDNLPGIVRNNLAALKDHRILPKIPNVLNLSNNNDDNRMIHTPPMVSMPKIQVKDVNELKQIPLELDTPAKSDHSDSEPEDTYSNHSNHLMSTPLSHFVRESRPIAAPMDLSMDVLDLSKKKRDVTPEPEIQNHEDDDNDSLDEDEAKPQDLTIKTMSQMAAAATPPPASIFEKTQLLLAQQLLKRDTVVPSVFPPNFYSNFYNANTRPPTVPSLTTPPQFGNFPGINPYFLQAHPFLTPTASPQDFQEMKERFQKEFLEKLRGLQMSGGGLIMEQLASEKLQSFQQKQDQNTDEKSPLTIDTNQPFNSDNNSRSPMKQQSTPKMTENIISHTPNSVKMVIKNGVLMPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQFWSQRQRSNMSAGVPGRKPSLQILPNIQQQQQAQNFDLHKNLSNLPNVPKEIPPNFSLPTLNDLNKQQPLLISDQVKFAILAQQLKQQSMKQQNFSNNVVVKDENSHGNDDEEENDALVIDEEISQQSASTIERNNQTSSPLVIKSDLLPTILPQQQQQNEQKKNLEEKLKMIREKLLQQESNKKFNESLAIMDEQKREEIIRNEDLVPVSKLLDNAAQIPFREYFRRDTEDTETPSEEEEEGFLATSGSTSEGNISGSDGNRSESEHQHSKNTSNNIKENNNTEQSNEMPVKKKSAYSLAPNRVICPYCHRKFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVVNQTASNNNNNNNNNNTTTQSSNDQTTPNAIPTTNYMMRNVPERPFKCSTCPSSTFSTLSNLKKHVSCKHSGSTSPTSNKGDGDRPSVTSGSVYDSHSSEDEYSRVEKLIKTYKNDNWDQNINNNTDSLITNSTTNGNNNPGATPQNSDLPFKCHLCDSSYGERQEALDHIKDQHTAEYELLLSKGALEQSQIHHEQHQHSIENHSDEQDDQIHLRGKFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCRRRFTLKHSMLRHRKKHNNNNNNNNSDAETTPSNLTTNNNDDNNIQSSSAGEETDLEKPSENNNNNLLVKSTAAAEEPESGGSDLLSNLLQIRDRSIIDQVLVSSADDAAKLLGVNKNID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01061213;
90% Identity: iTF_01061213;
80% Identity: -