Basic Information

Insect: Chrysoperla carnea
Gene Symbol: ZFAT
Assembly: GCA_905475395.1
Location: FR997758.1:9992299-9994148[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.046 0.99 10.4 2.4 2 20 144 162 144 164 0.90

2 14 0.00028 0.006 17.4 1.2 1 23 170 192 170 192 0.97

3 14 0.007 0.15 13.0 4.6 1 23 198 221 198 221 0.98

4 14 0.02 0.44 11.5 1.1 1 23 240 262 240 262 0.99

5 14 0.023 0.49 11.3 0.5 1 23 268 292 268 292 0.95

6 14 0.99 21 6.2 5.8 1 23 298 321 298 321 0.90

7 14 0.00029 0.0062 17.3 1.3 1 23 335 357 335 357 0.96

8 14 0.0029 0.062 14.2 0.3 1 21 367 387 367 388 0.91

9 14 9.2e-05 0.002 18.9 3.5 1 23 408 430 408 430 0.98

10 14 2.7e-05 0.00058 20.6 2.5 1 23 439 461 439 461 0.96

11 14 6.3e-06 0.00014 22.5 0.6 1 23 467 489 467 489 0.99

12 14 0.0021 0.046 14.6 0.2 1 23 495 517 495 517 0.97

13 14 5.7e-07 1.2e-05 25.8 0.8 1 23 523 545 523 545 0.98

14 14 5.6e-06 0.00012 22.7 2.9 1 23 551 573 551 573 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.046	0.99	10.4	2.4	2	20	144	162	144	164	0.90
2	14	0.00028	0.006	17.4	1.2	1	23	170	192	170	192	0.97
3	14	0.007	0.15	13.0	4.6	1	23	198	221	198	221	0.98
4	14	0.02	0.44	11.5	1.1	1	23	240	262	240	262	0.99
5	14	0.023	0.49	11.3	0.5	1	23	268	292	268	292	0.95
6	14	0.99	21	6.2	5.8	1	23	298	321	298	321	0.90
7	14	0.00029	0.0062	17.3	1.3	1	23	335	357	335	357	0.96
8	14	0.0029	0.062	14.2	0.3	1	21	367	387	367	388	0.91
9	14	9.2e-05	0.002	18.9	3.5	1	23	408	430	408	430	0.98
10	14	2.7e-05	0.00058	20.6	2.5	1	23	439	461	439	461	0.96
11	14	6.3e-06	0.00014	22.5	0.6	1	23	467	489	467	489	0.99
12	14	0.0021	0.046	14.6	0.2	1	23	495	517	495	517	0.97
13	14	5.7e-07	1.2e-05	25.8	0.8	1	23	523	545	523	545	0.98
14	14	5.6e-06	0.00012	22.7	2.9	1	23	551	573	551	573	0.98

Sequence Information

Coding Sequence: ATGGAAAATTTTGAAAATATATGCCGTACATGTTCCTTACAAGGTGAATTACATCCAATTTTCCATGAAAATACGGCAGATATGTTATCCGATATTATTGATATTAAGGTAATCAAAGGTGATAATTTCCCACAAAATATATGTACATTTTGTCTAGAAAAATTAAATTCTGCATACAATTTTAAAAAACAATGTAAAGATATCCATAGAAAATTTGAAGAAATTATTAAAGTTAACTTAGAAAATTTGAATGGAATTAAAGAGGAGATTGTTGTTAAATCCGAAGACGGTGCTTATGTTCTGGTGGATGATGCATGGAATGAAGATTGGACAGATAATGCTCAAAATTCGCCTGAGGAAGAGGATCATACAAACGCAAATGATCATGAAACGAAAGATAATGATGATAAAGATACCGTGGGGTATCGTGAATGTAAAATTTGTAAAAAGGTATTAAAACGAGGTAGCTATTTACGACATCATAAACTTCATATTGGCGATCGTCGATTTATTTGCGATACTTGCGGTAAAAGTTTTATGACGGGTTATAAATTAAAAATTCATAAACGTTTACATTCCGATGAAACACCGTATAAGTGTAAACATTGTGAAAATTCATATAAAGGAGATGAAAATTTATTACATCATATGAAAATTAAGCATCCCGAAGAATTATTATCAAGTGATACTAAAAGGGGGAAACGTAATTTAACGATATATAAATGTGAATTTTGCAATGAAGAATATTTAGTAAAAGCATATTATGAGCGACATTTACGAACACATGCCATAGAACCACCTTATCCATGTCCACATCCGTTATGCGATCGCGGTTATTTTAGTCGCTACGAATTAAAAGTACATTCTAGTATTCATTCCGAAGATTCCCCGTATAAATGTTTATATTGTTCGAAAACATTTAAATTAAAACGTAATCAATATTTTCATATGCGTTTCAAACATTTAGATTTACTAAGATATAATGCAACAGATTCGAAAAGTTACGAATGTGAAATATGTAATCGAAAATTTAAATCACAATTAAATTATAATCAACATAAAGTTGTACATACAGAAAATTCGAATAAAGAACGTCCATTTTTATGTTCGACTTGTGGACGATCATTTACAATACAAGCGTCTTTATATAATCATCAAGAAAAATGTTTAAAAAAACCACAAGTAAAGAAATCCGAACCGAAAGTAACCGAAAATGGTAAGTTTGAGTGTGAGGATTGCGGACGAGTTTATCAACATAAGCATACGTTACTACAACATCAAAAAGTCCATTCGAAAAATTATAAACCCAAGTCATTCTTATGCAATTATTGTGCGAAATCATTTTGTTCGAAAGCGAGCTTAGAAACGCATATAAATACACATACCGGTGCGAAACCGTATAAATGTGTGACATGCGGGCGAGCTTTTGCACAACATGCTGCGTTAAATACACATCAGCGTGTGCACACTGGGGAAAAACCATATAAATGTGAAATATGTGGTAGAGAATTTGCATTTAAAGTGCCTTTTAAATATCATGCGCTTGTACACACAGGAGAAAAACCTCACGAGTGTTCGATTTGTGGACGACGTTTTGCGTTAAATGGTAATTTAACTGTTCATATGCGTACACATACGGGGGAAACACCTTATGTATGTTCGATCTGTAATAAAGGCTTTTATAATTCAAATAATTTAAAAAAACATAAGAAAAAACATGTGAAAGAAAGTAGTCAATAA
Protein Sequence: MENFENICRTCSLQGELHPIFHENTADMLSDIIDIKVIKGDNFPQNICTFCLEKLNSAYNFKKQCKDIHRKFEEIIKVNLENLNGIKEEIVVKSEDGAYVLVDDAWNEDWTDNAQNSPEEEDHTNANDHETKDNDDKDTVGYRECKICKKVLKRGSYLRHHKLHIGDRRFICDTCGKSFMTGYKLKIHKRLHSDETPYKCKHCENSYKGDENLLHHMKIKHPEELLSSDTKRGKRNLTIYKCEFCNEEYLVKAYYERHLRTHAIEPPYPCPHPLCDRGYFSRYELKVHSSIHSEDSPYKCLYCSKTFKLKRNQYFHMRFKHLDLLRYNATDSKSYECEICNRKFKSQLNYNQHKVVHTENSNKERPFLCSTCGRSFTIQASLYNHQEKCLKKPQVKKSEPKVTENGKFECEDCGRVYQHKHTLLQHQKVHSKNYKPKSFLCNYCAKSFCSKASLETHINTHTGAKPYKCVTCGRAFAQHAALNTHQRVHTGEKPYKCEICGREFAFKVPFKYHALVHTGEKPHECSICGRRFALNGNLTVHMRTHTGETPYVCSICNKGFYNSNNLKKHKKKHVKESSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01061028;
90% Identity: -
80% Identity: -