Ccar010222.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysoperla carnea
Gene Symbol
Pik3c2a
Assembly
GCA_905475395.1
Location
FR997755.1:98729328-98784207[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0035 0.076 13.9 0.8 1 23 50 72 50 72 0.98
2 17 6.7e-05 0.0014 19.3 0.6 1 23 78 100 78 100 0.97
3 17 0.00026 0.0057 17.4 1.6 1 23 106 129 106 129 0.98
4 17 7.1e-05 0.0015 19.2 1.3 1 23 141 164 141 164 0.98
5 17 3.4 74 4.5 1.2 1 23 192 214 192 214 0.95
6 17 2 43 5.2 0.1 1 12 219 230 219 233 0.92
7 17 0.00049 0.011 16.6 4.0 3 23 326 346 324 346 0.97
8 17 1.1e-05 0.00024 21.7 1.4 1 23 352 374 352 374 0.96
9 17 0.0049 0.11 13.4 2.0 1 23 380 402 380 402 0.96
10 17 0.00072 0.016 16.1 1.7 1 23 410 433 410 433 0.94
11 17 8.1e-05 0.0018 19.0 1.8 1 23 476 498 476 498 0.95
12 17 0.00072 0.015 16.1 0.8 1 23 504 527 504 527 0.95
13 17 7.6e-05 0.0016 19.1 0.6 1 23 533 555 533 555 0.97
14 17 0.00018 0.0039 18.0 5.3 1 23 561 583 561 583 0.99
15 17 8.4e-06 0.00018 22.1 4.8 1 23 589 611 589 611 0.97
16 17 0.00099 0.021 15.6 2.7 1 23 617 639 617 639 0.98
17 17 1.4e-05 0.00031 21.4 0.5 1 23 645 667 645 667 0.99

Sequence Information

Coding Sequence
ATGTCGCTTGATGCAACAGATTTTCTAGACATTAACGAACAAATTAAATCGGAAAGCGAATTACACACAGAAGTAACAATTAAGCAAGAAGTATTCGAAGAGAGTGATTCAGAAGAAAATCAACAAATTGAAGATGAAAACAAATGCTTTTCATGTAAAGTTTGTGATCAAACATTTACTATGGAAATTTATTTAATTGATCATAAACAAACACATAAAGTGGGGAAATGTTTTCCATGTGATATTTGTAATAAAAAATTTTCAAAACTGTCTGATTTACGTGAACATAAACTTATACATTCTGCAAAAAACATTTATTCGTGTGATGTTTGTGGTAATAAATTTACTCAAATAAGTAGTTTATATCGACATAAACGAACACAACATTCTGTAGAAAATTCGTCCAATGTTCAAGAAACTTTTTCGTGTGATGTTTGTGGTAATAAATTTTCTCAAATAAGCAGTTTATATCGACATCAACGAACACAACATTATGGAGAAAAATCATTTTCATCCGATGTTCAAGAAAGTTCATTTCAATCTAAACATAAAAAAATTCATTCTAACATGCCTTTTTCATGCGATATTTGTGAAAAATGGTTTGAATCAGAATTTAGTTTCGTTACACATAAACAATTTCATACGGATGAATCTTTTTCATGTGATGTTTGTGAAAAAGCTTTTACCCATTTATTAGAACATAAAATTCTGAAAATTGAAGAAAAACCGTTTTATCTTCAAATTGAAAAACAGTTTCATACAGAAACAATTATGATTAAAGAGGAAATTACAGATAATGAATTTAAAATGGAATCCGAGGATATTCAAACTGATTATGTAAAACCAGATAGAAGTTATGAATCAGATGGAATGAATTCAGAAAATATTCGATTAACGAACGTAAGTGGGACACATAAAGAAAAGAATATTTTGAAAAAACGTAAACGAAGGGGGCATATTAAACGTGAATTATTTTGTGATATTTGTGGTAAAACATTTAAATATCTACATAATTTCAAATTACATAAACAAACTCATACTGGGGACAAACCATATTTATGTGACGATTGTGGGAAAAAGTTTTCGTTACCATCGCATTTGGTTCGACATAAACGAATTCATACGGGAGAGAAATCATATTTGTGTGATATTTGTGACAAAGCTTTTCTACGTAGTGATTATTTACATCGACATAAACTTACTCATAATAATACTGGAGAAAAGCCTTATTCCTGCAATATTTGTGAGAAAACATTTAAACAACAACGTTATTTAGATCAGCATAAACTACAGATTCATGGTGAAAACAAACCAGATTTAGTCTCAGAAAATGATCAATTTGGGGAAGATGATTTAGTGAGTATAGCTCAAATGTGTACTGTCGATTTAAAAGATGATAATTCTGCAAAAGCTGAAAATCAAATTTTTAAATGCGATATATGCGAGAAAGTTTTTAAACGGAAGGAAAGTTTAATCCAACATAAAAGTTTTCATGCAGGCGAAAAACGTTTCTCTTGCGACGAATGTGACAAAAAGTATAAAAGTCTAGGCAGTTTAACTCAACATAAAATCATAACTCATGCAGGTGAAAAACGATTCGCTTGTGATATATGCCAGAAAACGTTTACAGCAAAAGGTACCTTAAATCAACATCAGAAAATTCACACGGGCGAAAAACCATACAAATGTCATATTTGTGATAAAAAATTTCGAACGATGAGTCATTTACCAGAACATTTACGTACACATACCGGAGAAAGACCGTTCGCTTGTGAAAAATGTGGAAAATGTTTTTCACACTCGAGTAGTTTACTGAAACATCAACAAATACACTTGAAAAACAAACCGCATAAATGCAGTTTTTGTTTTAAAGGTTTTACACAGCTGGGAAATTTAGTGAAACATGAGCGTATCCATAATGGGGTGAAATTATTTAAGTGTGGCGTTTGTGATAAAGCATTTACACAACGTGGAACGTTATTGTCACATGAACGAACTCATAATAAGGTAGAAATGTCGCAAGAGACAGATTATGAAAAACAATTCCAATTAGACTTAGAAAAAGCACAAGCTTTAAGTCTTGAAAGTTTAGCATTGGAGAAATTTCGTATGAAAAAGAAACTTGAAAAATTACAAACACAATTAAATAAATATTCAAATACCACTTCAAATTCAGCAACAGTTGCGGCCGTATCAGCCGCACAACAACAGTATAATGAATTATCTCGCTCTGAAAAACAGCATCAAATCAAGTCACGACCACGGCCAGGATCGTTTAACACAGGACAATCTAGTTCGATTCTAGCACCACCGCCAATCTATCAAAGAAGGAATAGTTCTGCACCAAGTACAGCATCGGACGAAGCTGATTTAATATCATTCACTAGTCCTACACAATCATCTGTACCACCACAAAAGAGCCAAGATTCCTTGAAAGAATTCTGTGATCAAATAAATTTACTTACCCAACAACAATCTGATATGAGCTTAGTAGAGAAAAATCCCCGTCAACAAATGTTAGCATTAAGTCGTAACAATAATAATTTAACAACATATCCAACAAATTTGTTTACACCACAACAGCAACAATCGCCAACGATTTTACCAACGCTGCCTTCATTCAATCAAATGCTTCAACAGCCACAGCCACAGCTCGCACAACAATCACCAGCTGCTCCAAGCTATGGTTTTCAGCCGCATATTACTTCTGGTTTAAATCTTATGAGCGGAATAGCACCATTAAATTCTGGTTATCAATATCCACCACCAGTGCCTCAAATTCCGCCATTGCCAACAAATTATTTACCTCGAGTCGAACCGCCAAAGTTAGATATACCAGCAATAACTTCCACACCAAATATTGATGTGTTCAAAGTAATTAGTAAACAAAATAATAGTAATTTAATTGATTTAGCATCTGGTTGCGATTTATCTGACGAGAATCGTTCAGATAAAAAGAATAATGTACGTGTTAGCGTTTTGGAAATATTTGATCCATTATTAACGGATCGAAATTTAAATAAACCAATAGATTCTTCCTCTACAACACAAACTGCCGATGATGCGGCATCTGAATGTTCTGGCAGTATGTATAATGAGTACGATCCATTTGATTATTTATATAATACTGGCTCCGGTGTTCCAAGCAATGCAGATCCAATTTATGCTGCCGTTGTACGTTCAGATAAAACACCACAATCACCACAGTCACCGCCACCTTTACCACCACGTGCTGTCTGGTCCACCTTAGAAAAGAAACGAAAAAGTATTGATGTGCTTCAAACGAAAAGAAATAGGTTGTACGAGAACATAACGGTTGTGAAACGAAAATCATTTCATCATGATTGTGATTTACGAGCTTTTTATACAATGGTTAAAGATATTCGAGGACGATTTTTATATAATGATCCAGAAACAAATCCAGGAGTAATTATTAGTCCAATGATAAGTAATTTATATAGATCCGATACGAGTATTAAACTTGTGGTTTATCCAACAAAAGGTGAACGAAATTTGGAAAATCCTCCAAAACCAATATCATTTACATGTGATGTGTCGTGCAGCGTGGAACACGTGATATTACATGTTCTGTGTGAGTTAGATGAACCACCAGAGAGAGCACATCGTTTAGAAGTATGGGGTGCGGTTGAATATTTAGCACCTGGAACATGTCTAGCTGATTACGAATACGTGCATCATTGTATTAAATTAGAGCAAGATGTCGTTTTTTCATTAGTACCTGAAAATTTAGTTGATTGCTCATTATTGAGAACTGCTCAAGATGATCGAAGAGATTTCGAATTGACCATCGATGATTTATTACCAAATGAACCCGGTTTTCCAATATCACATGAAAAATTAAAAATATTATTGGAAATCGTTGAACGAGAAATAGAACGTTTAGAGGCGGCTGCCGTTGAATTATCAACGAATTCAACAACAATTTTACATTCCAATGGTGTTGTGCAAGCGGTCAAAGCTGTTTGTATGCTTATGGGTATGATTGAAACACCTGATATATCTGAGGCTGTGGAAAAGATTGTCACATGTTGTGCGAATAATTCTAATGTTAGTGATTATAATTCGATAAATAAGGATATCGATTTAGTAGAAACAATAAAATCGAATTGTGAACGAATTCGAGCCGCTATACAAGGTTTAATAGAAATGTACTGTCAAGCATTCCGTGTAGATTTTCAATTAAGTTATAAAAATGAATTAGCTTCAAATTCTTTAACTGTATCTGATGTGTTAGATACAATATTAATTCACGTATGTGCCTTACATAGAGTTCCTACCACTTGGAAGCATAACGATTACCTGATAGCCGCACAAATTTATCATGGAACTCGTCCTGTAGGGCAGCCAATTCTTTCTCTACCGACACCGATTTCTGTTGGTTTTTATCCTAGAATTTCATTTAATTCCTGGTTAGATATGGAAGGAATTAGTGTTTGCCAATTGGCGCGAGAGTCTCGTATAGTTTTAGTTCTATATGGCCGTACATTGGAACCAACTGACAAAGATGAAACAAATACTGTACCGAAATATACTCAAGAAGAATTGGGTTGGGCTTCAATACAATTTTTCGATTACAATGGAATGTTTACCCAAGGAAATTTATTAATTTCATTATGGCCTTCGGTAACTGATAAAAGATTGGGACCAGCACCATGCCATGGGGCTCATCCGCTTCCCGATCATCCTCTATTAAGCCTAGAATTACCTAGTCCTGCTGGGAAAATAATATTTCCATCAACTCCACCACAATCACCAAATAATCGTGAACCAGTTGGTGATTTTGCATGTTTAGATGAAAATACTCAGCAACAACTTTTAGATATCGTCGAAATGGATATTTTTAGTCGACCACCTATCGAATGTCGTGAAGTTTTGTGGGAGAAACGACATTATTTACGACATTTACCAGAAGCATTACCAAAAGTTCTTTTAGCTGCACATAGTTGGGATTGGGCTTGTTTGGCCGATTTACATTATATGGTTCATAAATGGACGCCAATGCAACCAGTTCAAGCTTTACAATTACTTTTACCTTGTTTTCCTGATATGGAGGTTCGTCGATGTGCAGTCAACTGGATAAAATCATTTACAAATGACGAATTGGCAGATGTTTTGCCTCAATTAGTACAAGCTTTAAAGCATGAAACATACGAAGCATCTCCGTTAGCTCGATTATTATTAGAAAGGGCATTAATATCTCCTAGAGTCGCACACAATTTATATTGGCTTCTAACGCATAGTTTACCTGGATCCTCACCACAGAATTCACAATGGGATACCGTTGCTCAAGATGAATTTAGTGTTGGCGCAGCAAGACACCATCGACGTTTAATGTTGATGTTACGTGCGCTCCTTGCAATATCTGGTGGTGCTCAAAGACAAAGATTTATGTCTCAACAACTCCTAGTCAAAAGTTTAAATGAAGTCGCCGAAAATGTAAAAACAACTAAAGAATCGCTGCGCTTGAAATCGTTGTTAACTAGTCTAGAACCAGTTCATCAAACATTAGTAGATAATACAACATGCCTACCGTTATCCCCTAGTTTATTGGTGAATGGTATACAAGTTCGAACATGTTCATATTTTGCTTCGAACACACTTCCATTGAAAATTAATTTTACTGCGCCAAATAATAATGCGATTATTCCGGCAATTTTTAAGGTTGGGGATGATTTACAACAAGATATGCTTACATTACAAGTTGTACGTATTATGGATAAACTTTGGTTACGAGAAGGCTTAGACTTAAAAATGGTATCGTTTTTATGTGTACCAACTGGACATAAGCGAGGAATGATTGAATTAGTTGCAAATTCTGAGCCATTACGAAAAATTCAAGTTGAATGGGGTTTAACAGGATCGTTTAAAGATAAACCAATCGCGGAATGGTTAGCCAGGCATAATCCATCTGAATTGGAATACGAGAGAGCAGTTGAAAATTTCACAGCGTCGTGTGCTGGATACAGTGTTGTGACGTATATTTTAGGTATTTGTGACAGACATAATGACAATATTATGCTAAAAACATCTGGACATGTTTTTCATATTGATTTTGGAAAATTTTTGGGTGATGCACAAATGTTTGGTAATTTTAAACGGGATCGTACTCCATTTGTGTTAACCTCAGACATGGCATACGTAATAAATGGTGGAGATAGGCCATCAGCACGGTTTCATCAATTTGTGGACTTGTGTTGTCAAGCGTATAATATTGTTCGAAAACATGGCAATCTAATTCTTCACTTATTTGCTTTGATGGCATCGTCAGGTATACCTGGTGTGACAATGGAAGCAGTCAATTATGTACGTCGTGCTTTATTACCAGGACAATCAAATGCAGAAGCAGCTGCAACATTTGCACGTCTTATTGAAAGCTCGCTGAAATCATGGTTTACACAGTTTAATTTCTTTTTACATAATTTGGCACAATTACGATTTACTGGAGATCATGGAGATGGAGAATTGTTATCGTTTGTTCCAAAAACTTACAGTTGTGTATCCGACGGGAGATTGTTGGGCGTAGAAGTACAAGGATATCAAAAACGCTACGATCCTGATAAGCATTACTTATATATCATAAAAGTGGAACGTGTTGGTTCACCAGATTCAAGTTACGTTTTGCGTTCGTATAAAGAATTCACGGAACTTTACCAAAAACTTTGTTTGCATTTTCCGTTAGCTAAGAAAGTTATGTCAAATACTGAAAGTTTTATTGAAATTGAAGATATCCAACGAATAGAACGATCGAATGACGTGGAAGATAAAGCTTCCATATCATCTGATTTATCAGGAAACGAAAAAGCACACCGTTTACATGCAATTGAAGAACAATTATCACGCGCCGAAACTAAATGTAATCTTTTAAAAGCTGAATTAGACTTTTTCAGGTAA
Protein Sequence
MSLDATDFLDINEQIKSESELHTEVTIKQEVFEESDSEENQQIEDENKCFSCKVCDQTFTMEIYLIDHKQTHKVGKCFPCDICNKKFSKLSDLREHKLIHSAKNIYSCDVCGNKFTQISSLYRHKRTQHSVENSSNVQETFSCDVCGNKFSQISSLYRHQRTQHYGEKSFSSDVQESSFQSKHKKIHSNMPFSCDICEKWFESEFSFVTHKQFHTDESFSCDVCEKAFTHLLEHKILKIEEKPFYLQIEKQFHTETIMIKEEITDNEFKMESEDIQTDYVKPDRSYESDGMNSENIRLTNVSGTHKEKNILKKRKRRGHIKRELFCDICGKTFKYLHNFKLHKQTHTGDKPYLCDDCGKKFSLPSHLVRHKRIHTGEKSYLCDICDKAFLRSDYLHRHKLTHNNTGEKPYSCNICEKTFKQQRYLDQHKLQIHGENKPDLVSENDQFGEDDLVSIAQMCTVDLKDDNSAKAENQIFKCDICEKVFKRKESLIQHKSFHAGEKRFSCDECDKKYKSLGSLTQHKIITHAGEKRFACDICQKTFTAKGTLNQHQKIHTGEKPYKCHICDKKFRTMSHLPEHLRTHTGERPFACEKCGKCFSHSSSLLKHQQIHLKNKPHKCSFCFKGFTQLGNLVKHERIHNGVKLFKCGVCDKAFTQRGTLLSHERTHNKVEMSQETDYEKQFQLDLEKAQALSLESLALEKFRMKKKLEKLQTQLNKYSNTTSNSATVAAVSAAQQQYNELSRSEKQHQIKSRPRPGSFNTGQSSSILAPPPIYQRRNSSAPSTASDEADLISFTSPTQSSVPPQKSQDSLKEFCDQINLLTQQQSDMSLVEKNPRQQMLALSRNNNNLTTYPTNLFTPQQQQSPTILPTLPSFNQMLQQPQPQLAQQSPAAPSYGFQPHITSGLNLMSGIAPLNSGYQYPPPVPQIPPLPTNYLPRVEPPKLDIPAITSTPNIDVFKVISKQNNSNLIDLASGCDLSDENRSDKKNNVRVSVLEIFDPLLTDRNLNKPIDSSSTTQTADDAASECSGSMYNEYDPFDYLYNTGSGVPSNADPIYAAVVRSDKTPQSPQSPPPLPPRAVWSTLEKKRKSIDVLQTKRNRLYENITVVKRKSFHHDCDLRAFYTMVKDIRGRFLYNDPETNPGVIISPMISNLYRSDTSIKLVVYPTKGERNLENPPKPISFTCDVSCSVEHVILHVLCELDEPPERAHRLEVWGAVEYLAPGTCLADYEYVHHCIKLEQDVVFSLVPENLVDCSLLRTAQDDRRDFELTIDDLLPNEPGFPISHEKLKILLEIVEREIERLEAAAVELSTNSTTILHSNGVVQAVKAVCMLMGMIETPDISEAVEKIVTCCANNSNVSDYNSINKDIDLVETIKSNCERIRAAIQGLIEMYCQAFRVDFQLSYKNELASNSLTVSDVLDTILIHVCALHRVPTTWKHNDYLIAAQIYHGTRPVGQPILSLPTPISVGFYPRISFNSWLDMEGISVCQLARESRIVLVLYGRTLEPTDKDETNTVPKYTQEELGWASIQFFDYNGMFTQGNLLISLWPSVTDKRLGPAPCHGAHPLPDHPLLSLELPSPAGKIIFPSTPPQSPNNREPVGDFACLDENTQQQLLDIVEMDIFSRPPIECREVLWEKRHYLRHLPEALPKVLLAAHSWDWACLADLHYMVHKWTPMQPVQALQLLLPCFPDMEVRRCAVNWIKSFTNDELADVLPQLVQALKHETYEASPLARLLLERALISPRVAHNLYWLLTHSLPGSSPQNSQWDTVAQDEFSVGAARHHRRLMLMLRALLAISGGAQRQRFMSQQLLVKSLNEVAENVKTTKESLRLKSLLTSLEPVHQTLVDNTTCLPLSPSLLVNGIQVRTCSYFASNTLPLKINFTAPNNNAIIPAIFKVGDDLQQDMLTLQVVRIMDKLWLREGLDLKMVSFLCVPTGHKRGMIELVANSEPLRKIQVEWGLTGSFKDKPIAEWLARHNPSELEYERAVENFTASCAGYSVVTYILGICDRHNDNIMLKTSGHVFHIDFGKFLGDAQMFGNFKRDRTPFVLTSDMAYVINGGDRPSARFHQFVDLCCQAYNIVRKHGNLILHLFALMASSGIPGVTMEAVNYVRRALLPGQSNAEAAATFARLIESSLKSWFTQFNFFLHNLAQLRFTGDHGDGELLSFVPKTYSCVSDGRLLGVEVQGYQKRYDPDKHYLYIIKVERVGSPDSSYVLRSYKEFTELYQKLCLHFPLAKKVMSNTESFIEIEDIQRIERSNDVEDKASISSDLSGNEKAHRLHAIEEQLSRAETKCNLLKAELDFFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-