Basic Information

Insect: Chrysoperla carnea
Gene Symbol: -
Assembly: GCA_905475395.1
Location: FR997759.1:28859725-28863992[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.017 0.37 11.7 2.7 1 21 74 94 74 96 0.93

2 32 1.6e-06 3.4e-05 24.4 3.5 1 23 102 124 102 124 0.97

3 32 0.022 0.48 11.4 3.8 1 21 130 150 130 152 0.95

4 32 6.2e-05 0.0013 19.4 1.3 1 23 158 180 158 180 0.97

5 32 8.4e-05 0.0018 19.0 0.5 2 23 202 223 201 223 0.97

6 32 0.00058 0.012 16.4 1.1 1 23 229 251 229 251 0.98

7 32 1.4e-05 0.0003 21.5 2.4 1 23 257 279 257 279 0.98

8 32 0.0022 0.048 14.5 1.0 2 23 301 322 300 322 0.95

9 32 0.0023 0.049 14.5 2.5 1 23 328 350 328 350 0.94

10 32 5.9e-07 1.3e-05 25.8 1.7 1 23 356 378 356 378 0.98

11 32 0.00028 0.006 17.4 1.4 1 23 384 406 384 406 0.98

12 32 3.4e-05 0.00074 20.2 1.4 1 23 412 434 412 434 0.96

13 32 0.0019 0.041 14.7 0.3 1 23 440 462 440 462 0.98

14 32 0.0077 0.17 12.8 1.8 1 23 468 490 468 490 0.98

15 32 0.012 0.25 12.2 0.5 1 23 494 516 494 516 0.97

16 32 0.00089 0.019 15.8 0.2 1 23 522 544 522 544 0.98

17 32 2.1 46 5.1 0.5 6 23 552 569 550 569 0.96

18 32 0.0018 0.039 14.8 0.1 1 23 575 597 575 597 0.97

19 32 0.0066 0.14 13.0 0.4 1 23 603 625 603 625 0.96

20 32 0.00017 0.0036 18.0 1.0 1 23 631 653 631 653 0.98

21 32 0.0001 0.0022 18.7 0.7 2 23 756 777 755 777 0.97

22 32 0.0055 0.12 13.3 2.0 1 23 782 804 782 804 0.93

23 32 3.3e-07 7.2e-06 26.6 2.3 1 23 810 832 810 832 0.98

24 32 0.0023 0.049 14.5 1.7 1 23 838 860 838 860 0.98

25 32 0.2 4.3 8.4 3.8 1 23 866 888 866 888 0.98

26 32 0.0022 0.048 14.5 1.9 1 23 894 916 894 916 0.96

27 32 0.28 6.1 7.9 2.1 1 23 919 941 919 941 0.94

28 32 1.6 35 5.5 0.6 1 20 947 966 947 970 0.81

29 32 2e-06 4.3e-05 24.1 2.2 1 23 1000 1022 1000 1022 0.99

30 32 2.6e-06 5.7e-05 23.7 0.9 1 23 1028 1050 1028 1050 0.98

31 32 1.1e-05 0.00024 21.8 2.7 1 23 1056 1079 1056 1079 0.97

32 32 0.00082 0.018 15.9 1.6 1 23 1088 1110 1088 1110 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.017	0.37	11.7	2.7	1	21	74	94	74	96	0.93
2	32	1.6e-06	3.4e-05	24.4	3.5	1	23	102	124	102	124	0.97
3	32	0.022	0.48	11.4	3.8	1	21	130	150	130	152	0.95
4	32	6.2e-05	0.0013	19.4	1.3	1	23	158	180	158	180	0.97
5	32	8.4e-05	0.0018	19.0	0.5	2	23	202	223	201	223	0.97
6	32	0.00058	0.012	16.4	1.1	1	23	229	251	229	251	0.98
7	32	1.4e-05	0.0003	21.5	2.4	1	23	257	279	257	279	0.98
8	32	0.0022	0.048	14.5	1.0	2	23	301	322	300	322	0.95
9	32	0.0023	0.049	14.5	2.5	1	23	328	350	328	350	0.94
10	32	5.9e-07	1.3e-05	25.8	1.7	1	23	356	378	356	378	0.98
11	32	0.00028	0.006	17.4	1.4	1	23	384	406	384	406	0.98
12	32	3.4e-05	0.00074	20.2	1.4	1	23	412	434	412	434	0.96
13	32	0.0019	0.041	14.7	0.3	1	23	440	462	440	462	0.98
14	32	0.0077	0.17	12.8	1.8	1	23	468	490	468	490	0.98
15	32	0.012	0.25	12.2	0.5	1	23	494	516	494	516	0.97
16	32	0.00089	0.019	15.8	0.2	1	23	522	544	522	544	0.98
17	32	2.1	46	5.1	0.5	6	23	552	569	550	569	0.96
18	32	0.0018	0.039	14.8	0.1	1	23	575	597	575	597	0.97
19	32	0.0066	0.14	13.0	0.4	1	23	603	625	603	625	0.96
20	32	0.00017	0.0036	18.0	1.0	1	23	631	653	631	653	0.98
21	32	0.0001	0.0022	18.7	0.7	2	23	756	777	755	777	0.97
22	32	0.0055	0.12	13.3	2.0	1	23	782	804	782	804	0.93
23	32	3.3e-07	7.2e-06	26.6	2.3	1	23	810	832	810	832	0.98
24	32	0.0023	0.049	14.5	1.7	1	23	838	860	838	860	0.98
25	32	0.2	4.3	8.4	3.8	1	23	866	888	866	888	0.98
26	32	0.0022	0.048	14.5	1.9	1	23	894	916	894	916	0.96
27	32	0.28	6.1	7.9	2.1	1	23	919	941	919	941	0.94
28	32	1.6	35	5.5	0.6	1	20	947	966	947	970	0.81
29	32	2e-06	4.3e-05	24.1	2.2	1	23	1000	1022	1000	1022	0.99
30	32	2.6e-06	5.7e-05	23.7	0.9	1	23	1028	1050	1028	1050	0.98
31	32	1.1e-05	0.00024	21.8	2.7	1	23	1056	1079	1056	1079	0.97
32	32	0.00082	0.018	15.9	1.6	1	23	1088	1110	1088	1110	0.97

Sequence Information

Coding Sequence: ATGGAATTTAATGATCTAACTAATGCAGTGTTTATAAAAACTGAAAATTTTACAACAGAACCAGAAGAAAATGATAACACAACAGGACTGATAAATGAATATACTGATGAAAAATCAATTCTAATCAAAGACGAAACTAATAAAATCGAAGAATTAATTCATGAAGAATTTGATGAAGAAGCTTTACAAAATAAAAGTGTACTTACGGACAATAAGCCTTTTTCATGCGATATTTGTGATAAGAAATTTCCATCACGAAGTAAAGTAGCTGAACATAAACGATGTCACAGTGACGAACAACCATTTTCATGTGATATTTGTAACAAAAAATTTACTCACTCGAGTAGTTTACGAAGGCATATAAAAGCTCATACCGGACTAAAAACATTTTCTTGTGATATGTGTGATAAAAAGTTTTCAATACGATACAAGTTAGTGGAACATCAACGATGTCACAGTGATGAAAAACCATTTTCTTGTGATATTTGTGAACGACGATTTACGAATCAATGGAGTTTTAAAAGACATGTTAAAGCTCATACCGAAATTAAAACTTTAACCGACAGTGATAACAACACTCAAACTGTGCGAGAAAAACAGTGGAAATGTGAAATTTGTGATAAAAGTTTTACTCTTAAAGGTTCTTTAGATTCACATAAACGTATTCATAGAGGGGAAAATCTATTTTCTTGTGATAAGTGTGATAAGAAATATCCAATACGAAGTAAGTTAGTGGAACATCAGCGATCGCACAGTGATGAAAAACCATTTTCTTGTGATATCTGTGAACAAAAGTTTAGTCATCCAGCGAGTTTAAACAGACATAGAAAAACTCATTCCGAAATGAAAACTTATACGGACAGTGATAATAACATCCATACGGTACGAGAAAAACGGTGGAAATGTGATGTTTGTGAACAGAAATTTGCCAGCAAGTTTAATTTAAAAGAACATAAATTCATTCATACCGGCGAAGCGCGATTTTCTTGTAATGTTTGTGGTAAGAAATTTATTCATCGAAGAGGTTTGTTCACACATAGTGTTTCTCATACTGGTGAAAAGAAATTTTCCTGTGAAATTTGTGATAAAAAGTTCACACTCAAAGAAAATCTACGTAGACATTTACGTATGCATGCCGGAGAAAAACCGTTTCAATGTGATTTTTGTGAGAAAACATTTGGACAGCGTGCGACTTTAATGCAACATAAACTTACTCATACGGGCGAAAAATCATTTTTATGTGATGTTTGTAATAAAATCTTTGCGTCGATGAAATATCTACGTCGACATCAAAGAACACATACCGGGGAAAAACCGTTTTCTTGTGATGTTTGTAATAAAAAATTTGTCGCTAGACAGGGTTTAATTGAACATAAACGTGTTCACACGGGGGAAAAACCATTTACGTGTGATTTTTGTGGTGAAAAATTTATGAATAAAATGATTTTGAAGAGGCATAAACGAATTCATAGCAAAAGTTTTTCATGTGATGTTTGTGATGAAACTTTTGATCTGGAAGAAAGTTTAATTTCACATAAACACGTTCATGCGGGAGAAAAAGCTTTTCCTTGTGAATTTTGTAATGAAAACTTTATCAATTTACCCGACTTAACAAATCATAAACGTATTCATACAGAGGAAAAATTATTTTCTTGTGATGAAACTTTTAAACTGGAAGAAAGTTTAATTTCACATAAACACGTTCATACAAGAGAAAAAGCTTTTCCTTGTGAATTTTGTGATGAAAAATTTATCAATTTACCCGACTTAACAAATCATAAACTTATTCATACGGAGGAAAAATTGTTTTCATGTGATGTTTGTAATGAAACTTTTAAACTGGAAGAAAGTTTAATTTCACATAAATACATTCATACAGGAGAAAAGCAGTTTTCCTGTGAATTTTGTGATGAAAAATTTATCTATTTATCCGACTTAACAAATCATAAACGTATTCATACGGGGGAAACATCGTTTTCAGGGGATATTTGTGAGAAAACTTTCACACAACTAAATGATTTAGTCGAAAATACCGGGGAAAATCCACTTTTGATCAAAGAGGAAAATATTAAAACTGAAGAATTACACAGCGAATTCATTATTAAAAGTGAAAATCTTGAAGAAATCAACGAAGAACCCGAAAGCACATTGATCGAGGAAAATCAATGTGATATTACTCATCCCGGGAGTTTAATCAAAGCTTCTACCGAAATGAAAACTGAAAACAGTGATACACTCTCTTATACTGAACAAGAAAAACAATGGAAATGTGATATTTGTGATAAAAGATTTTCCGCTAAGAATAATTTAGCTTCACATAAATCCACTCACAGTAGAACACGATTTTCCTGTGGTTTTTGTGGTAAAAAATTTATTCATCAAAGTAGGTTATTGACACATAGTGTTGTTCATACTGGCGAAAGAAAATTTTCATGTAAAATTTGTGGTCGAAAATTTTCATTCAAAGAAAATCTACGTAGACATTTACGTATACATGTTGGAGAAAAACCATTTCAATGTGATTTTTGTGATAAAAAATTTGGACAACGTCCTAAACTATTGCAACATAAACTTAGTCATACAGGGGAAAAATCATTTTCATGTGATGTTTGTATGAAAACATTTGCATGTCGGGAATATCTACGTCGACATAAAAGAATACATTCGGGGGAAAAACCGTATTCTTGTGATTTTTGTAACAGAAAATTTGTTGATAAGCAAGGTTTAAGTAGACATAAATATATTCATACCGGATTTTTATGTGATTTCTGTGATGAAAAATTTATCTGTTTATCCGATTTAACAAAACATAAACTTATTCACAGAGAGGAAAAGCTGTTTTCATGTGATGTTTGTGAGAAAACATTCTTGGAACTACACAGTTTAGTCGAACATAAAGTCGAATCACACAGTGAATTAATTAATAAAAGCGAACATGTTACAGCAATCATCGAAGAACCCGAAAACATATCTGCACAGTCTAAGACAAAAAACATTTTTCAATGTGATATATGTGAGAAAAAATTTACTTCACAAAGGTATTTAAATCAACATCAACGAGTTCACAACGGGGAAAAACCTTTTCAATGTGATGTTTGTAATAAGATTTTCACATATCAAAGTAATTTGATTGTTCATAAACGACTTCACACGGGAGAAAAACCCTTTTCCTGTGATATTTGTGATAAAAGATTTACGCAACAAAATCAATTAAAACAACATAAAAATAAAATGCATACTGAAGAAAAACAGGAACAAAAATTTTCATGTGAAGCTTGTGATGAGATATTTACTTATCAAAGTTGTTTAGAAAAACATAGACAAATTCATAGTTTTTAG
Protein Sequence: MEFNDLTNAVFIKTENFTTEPEENDNTTGLINEYTDEKSILIKDETNKIEELIHEEFDEEALQNKSVLTDNKPFSCDICDKKFPSRSKVAEHKRCHSDEQPFSCDICNKKFTHSSSLRRHIKAHTGLKTFSCDMCDKKFSIRYKLVEHQRCHSDEKPFSCDICERRFTNQWSFKRHVKAHTEIKTLTDSDNNTQTVREKQWKCEICDKSFTLKGSLDSHKRIHRGENLFSCDKCDKKYPIRSKLVEHQRSHSDEKPFSCDICEQKFSHPASLNRHRKTHSEMKTYTDSDNNIHTVREKRWKCDVCEQKFASKFNLKEHKFIHTGEARFSCNVCGKKFIHRRGLFTHSVSHTGEKKFSCEICDKKFTLKENLRRHLRMHAGEKPFQCDFCEKTFGQRATLMQHKLTHTGEKSFLCDVCNKIFASMKYLRRHQRTHTGEKPFSCDVCNKKFVARQGLIEHKRVHTGEKPFTCDFCGEKFMNKMILKRHKRIHSKSFSCDVCDETFDLEESLISHKHVHAGEKAFPCEFCNENFINLPDLTNHKRIHTEEKLFSCDETFKLEESLISHKHVHTREKAFPCEFCDEKFINLPDLTNHKLIHTEEKLFSCDVCNETFKLEESLISHKYIHTGEKQFSCEFCDEKFIYLSDLTNHKRIHTGETSFSGDICEKTFTQLNDLVENTGENPLLIKEENIKTEELHSEFIIKSENLEEINEEPESTLIEENQCDITHPGSLIKASTEMKTENSDTLSYTEQEKQWKCDICDKRFSAKNNLASHKSTHSRTRFSCGFCGKKFIHQSRLLTHSVVHTGERKFSCKICGRKFSFKENLRRHLRIHVGEKPFQCDFCDKKFGQRPKLLQHKLSHTGEKSFSCDVCMKTFACREYLRRHKRIHSGEKPYSCDFCNRKFVDKQGLSRHKYIHTGFLCDFCDEKFICLSDLTKHKLIHREEKLFSCDVCEKTFLELHSLVEHKVESHSELINKSEHVTAIIEEPENISAQSKTKNIFQCDICEKKFTSQRYLNQHQRVHNGEKPFQCDVCNKIFTYQSNLIVHKRLHTGEKPFSCDICDKRFTQQNQLKQHKNKMHTEEKQEQKFSCEACDEIFTYQSCLEKHRQIHSF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -