Basic Information

Insect: Chrysoperla carnea
Gene Symbol: -
Assembly: GCA_905475395.1
Location: FR997754.1:1950427-1954230[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 8.7e-07 1.9e-05 25.2 2.3 1 23 85 107 85 107 0.99

2 29 4.6e-06 9.9e-05 23.0 1.0 1 23 113 135 113 135 0.98

3 29 2.4e-06 5.3e-05 23.8 1.5 1 23 141 163 141 163 0.98

4 29 0.00094 0.02 15.7 0.4 1 23 169 191 169 191 0.94

5 29 1e-05 0.00022 21.9 2.3 1 23 197 219 197 219 0.98

6 29 1.3e-06 2.9e-05 24.6 2.1 1 23 225 247 225 247 0.98

7 29 0.0011 0.025 15.4 1.0 1 23 253 275 253 275 0.98

8 29 8e-05 0.0017 19.1 7.3 1 23 281 304 281 304 0.97

9 29 4.3e-05 0.00094 19.9 3.4 1 23 344 366 344 366 0.98

10 29 0.00062 0.013 16.3 1.6 1 23 372 394 372 394 0.95

11 29 0.013 0.28 12.1 0.5 1 23 400 422 400 422 0.96

12 29 0.0051 0.11 13.4 6.5 1 23 529 551 529 551 0.97

13 29 1.9e-06 4.2e-05 24.2 3.6 1 23 606 628 606 628 0.98

14 29 0.011 0.23 12.4 2.9 1 23 634 656 634 656 0.98

15 29 3e-06 6.5e-05 23.5 1.4 1 23 662 684 662 684 0.97

16 29 2.5e-06 5.3e-05 23.8 1.6 1 23 711 733 711 733 0.99

17 29 0.0068 0.15 13.0 1.7 1 23 739 761 739 761 0.97

18 29 1.7e-06 3.6e-05 24.3 1.1 1 23 767 789 767 789 0.97

19 29 0.00016 0.0034 18.1 4.6 1 23 795 817 795 817 0.98

20 29 0.00067 0.014 16.2 1.2 1 23 910 932 910 932 0.98

21 29 7.2e-07 1.6e-05 25.5 1.5 1 23 938 960 938 960 0.98

22 29 8.8e-05 0.0019 18.9 0.7 1 23 966 988 966 988 0.98

23 29 5.5e-05 0.0012 19.6 2.4 1 23 994 1016 994 1016 0.97

24 29 4.3e-07 9.2e-06 26.2 1.4 1 23 1022 1044 1022 1044 0.98

25 29 8.8e-05 0.0019 18.9 0.7 1 23 1050 1072 1050 1072 0.98

26 29 2.7e-05 0.00058 20.5 0.3 1 23 1078 1100 1078 1100 0.97

27 29 4.1e-06 9e-05 23.1 3.9 1 23 1106 1128 1106 1128 0.98

28 29 0.00015 0.0031 18.2 1.1 1 23 1134 1156 1134 1156 0.99

29 29 1.6e-05 0.00035 21.2 3.9 1 23 1162 1184 1162 1184 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	8.7e-07	1.9e-05	25.2	2.3	1	23	85	107	85	107	0.99
2	29	4.6e-06	9.9e-05	23.0	1.0	1	23	113	135	113	135	0.98
3	29	2.4e-06	5.3e-05	23.8	1.5	1	23	141	163	141	163	0.98
4	29	0.00094	0.02	15.7	0.4	1	23	169	191	169	191	0.94
5	29	1e-05	0.00022	21.9	2.3	1	23	197	219	197	219	0.98
6	29	1.3e-06	2.9e-05	24.6	2.1	1	23	225	247	225	247	0.98
7	29	0.0011	0.025	15.4	1.0	1	23	253	275	253	275	0.98
8	29	8e-05	0.0017	19.1	7.3	1	23	281	304	281	304	0.97
9	29	4.3e-05	0.00094	19.9	3.4	1	23	344	366	344	366	0.98
10	29	0.00062	0.013	16.3	1.6	1	23	372	394	372	394	0.95
11	29	0.013	0.28	12.1	0.5	1	23	400	422	400	422	0.96
12	29	0.0051	0.11	13.4	6.5	1	23	529	551	529	551	0.97
13	29	1.9e-06	4.2e-05	24.2	3.6	1	23	606	628	606	628	0.98
14	29	0.011	0.23	12.4	2.9	1	23	634	656	634	656	0.98
15	29	3e-06	6.5e-05	23.5	1.4	1	23	662	684	662	684	0.97
16	29	2.5e-06	5.3e-05	23.8	1.6	1	23	711	733	711	733	0.99
17	29	0.0068	0.15	13.0	1.7	1	23	739	761	739	761	0.97
18	29	1.7e-06	3.6e-05	24.3	1.1	1	23	767	789	767	789	0.97
19	29	0.00016	0.0034	18.1	4.6	1	23	795	817	795	817	0.98
20	29	0.00067	0.014	16.2	1.2	1	23	910	932	910	932	0.98
21	29	7.2e-07	1.6e-05	25.5	1.5	1	23	938	960	938	960	0.98
22	29	8.8e-05	0.0019	18.9	0.7	1	23	966	988	966	988	0.98
23	29	5.5e-05	0.0012	19.6	2.4	1	23	994	1016	994	1016	0.97
24	29	4.3e-07	9.2e-06	26.2	1.4	1	23	1022	1044	1022	1044	0.98
25	29	8.8e-05	0.0019	18.9	0.7	1	23	1050	1072	1050	1072	0.98
26	29	2.7e-05	0.00058	20.5	0.3	1	23	1078	1100	1078	1100	0.97
27	29	4.1e-06	9e-05	23.1	3.9	1	23	1106	1128	1106	1128	0.98
28	29	0.00015	0.0031	18.2	1.1	1	23	1134	1156	1134	1156	0.99
29	29	1.6e-05	0.00035	21.2	3.9	1	23	1162	1184	1162	1184	0.97

Sequence Information

Coding Sequence: ATGGAAGATGGGCTAATTGTAGTTAAACATGGAATCGGTAAATCAGAAGTTAAACTTGGAAAAGAAGAAACATTGGACGAAAATATTACAACAGAAAATGTTCTGATTAAACAAGAGATCGATTTAGAAGAAATATTTATTAAAGAAGAAATATCAGAAGAAAGTGATAATTTAGAACATGAACTAATTACAGCTGAATATGAAACTGATGAATTAGAAGATTCTGCTTCAAGATTTCAAGAAAATAAACCATATTCATGTGAGTTTTGTGACAAAACATTTACGTTAGCGAGTAGTTTAAAAAGACATCAACGAACTCATAATGGAGAAAAATCATTTTCATGTGAAATTTGTGATAAAAAATTTAGTCAAAAAGCTTATTTAGCTCAACACAAACGAATTCACACTGGATTCAAACCATTTTCCTGTAACATTTGTGATAAAAAATTTACTAAGTATCCCAATTTAATTAATCATTTACGGACTCATACTGGTGAAAAACCATTTTCATGTGATATTTGTGGTAAAAAATTTACTGTGGTGAATGGTTTGAATAGACATAAAGTGAATCACACCGGAGAAAGGGCATTTACTTGTGAAATTTGTAATAAATCATTTACACATAACAATTATTTAATTGGGCATCAACGAATTCATACCGGGGAAAAACCATTTTCGTGTAAATATTGTGATAAAAAATTTACACAGTATCCCAATTTAATGGATCATATACGGACTCATACAGGTGAAAAACCATTTTCCTGTAAAATTTGTGAAAAAAAATTTAGTTGGCAAAGTAGTTTAATTAGTCATAATCGAATTCACACGGGAGAAAGACCTTTCTCGTGTGAGATTTGTGATAAAACTTTTACGCAACATAGTAGTTTGAAGACACATCATAAAAAATTTCACACTGGGAAAAAACGTCTTTCATGTGAAATTACTACAGAAGAAAATGTACAAATTAAAGAAGAAAATGAAACCGATAACTTAGAAGATTCTACTTCAAGATTTCAAGCAAATAAACCATTTTCATGCGACTTTTGTGACAAAAGATTTAAAGATCGAAGAAATTTAGTTGTGCATCATCGAGTTCATACCGGTGAAAAACCATTTTCTTGTGAAGTTTGTGAAAGAAAATTTACTCAACATGGTGCGTTAAAAAGACACAAAGTTATTCATACTGGAGAAAAACTATTTTCTTGTGAAGTTTGTGACAAAAAATTTAGTTTGCAAAGTATTTTAGATAGACATAAAATAATTCACATCCAAGACAATCGTGCCGATGAAGTTTTTGAAGAAGAAAACGTTTTGATTAAAGAAGAATTAATTGACATCGATGAAAAACCATTTTTACTTGGCTTGAATGATGAAAAACTTGAAAAAAATAATAAATTTAATGAAGAATACACAAAAAATGAAGTCATTGGAGAAGAAAATGTTCAAATTAAAGAAGAAATAAATTTGGAACAAGTTTTGATTAAAGAGGAAGCATTCGAAGAAAATAACCCAATGGAACAGCTGAAGCATGCAACCGATCAATTTGAGACTATAACTGTTTCAAAACGTCTAAAAAATAAAAAATATTCGTGCGATTTTTGTCATATGGCATTCAGTCGACGATTTAGTTTAAAAAGACATCATACCATTCACGCGAGAGAAAGACTTGATAAAAGAAATGAAATTATCGAAGAAGAAAATGTACAAATTAAAGAAAATTTAATAAAATTAGAAGGAAATTACCTAAATACAACTGAGAATGAAAACATTAAATTGAAAGCTAAAACTGTTTCAAAATCTCGAAAAAACATACCATATTCTTGTGATTTTTGTAAGAAAACCTTCAGTCGACGAAGTAATTTGATTAAACATAAACGAATTCATACCGGAGTAAAGCCATTTTCTTGTAAAATTTGTGATAAACAATTTCGTTGGCGACATAGTTTAATAAGTCATAATCGAATACACACGGGAGAAAGACCTTTCTCGTGTGAGATTTGCAATAAAACATTTACTCAACAGAGTAGTTTGAATACACATAAAGAAATCCACAAACAAATGGATCTACTGAAAGATCCAACCGATCAATTACAGAAAAGAACTGTTCCAAAACGGCAAAAGAACAAAAAATATTCATGCGATTTTTGTAAGAAAATCTTCAGTCGACGAGGGAACTTAATTGAACATCAACGAACTCATACTGACGAAAAACCATTTTCTTGTAAAATTTGTGATAAACAATTTCGTTGGCCACATAGTTTAGTGAGTCATAATCGTATTCACACGGGAGAAAGACCTTTCTCGTGTGAGATTTGTGATAAAACATTTACCCAACAGAGTAGTTTGAATACACATAAAGAAATTCATACGAGGGAAAAATGTTTTTCATGTGAAATTTGTAGTAAAAACTTTAATCACAGAACGTCTTTAGTTCGTCATAAACGAACTCATTCCGTTCACCAGCAAACTGGTTTAAATTTAACCCATGAAGTGTTCGAGGAGGAGAGTGATTTGATTAAAGAAGAATTTGACGATGGAAAACTTGAAGAAGAAAACACGAAAAATGAAATTCTTTTAGAAAAAAATAATCACATCAAAGAAGAAGTGAATAAAGAGCTAGTTGTGATTAAAGAAGAAACCTTAGAAGAAACTGACTCAATGGAACAGCTGAAAGATACAACCGAGCAATTAGAAGATTCTGCTTCAAAATCTCAACAAAACAAACCATATTCTTGTGATTTTTGTAATAAAAGATTTAGTTTGAAAAGTGTTTTAATTATCCACAAACGAATTCATTCTGGAGAAAAGCCATTTTCATGTGAAGTTTGTGGCAAAAAATTTACTCAACAAAGTTCGTTAAAAACACATCAAGTAACTCATACTGGTGAAAAAACATTTTCATGTGATGTGTGTGACAAAAAATTTAGTCTTCAAAGTGTTTTAATTGTCCACAAACGAACTCATACGGGAGAAAAACCATTTTCATGTGACGTATGTGACAAAAAATTTTCTCAATATAGCACATTAAAAACACATAAAGTAACTCACACGGGAAAAAGAACATTTTCATGTGAAATTTGTGATAAAAAATTTAATCAACAAACTAATTTAAATAGACACCAAATGGTTCATACTGGTGAAAAACCATTTTCTTGTGAAATTTGTGGTAAAAAATTTGGTCAAAAAAAAGATGTAATACAACATAAACGAATCCATACCGGTGAAAAATCATTTTCATGTGAAATTTGTGATAGAAAATTTATTCAACCTGGTGCGTTAAAAAGACATAAAGTAACTCACACTGGAGAAAAACTATTTTCATGTGACGTTTGTGATAAAAAATTTACTCATAAAAGTAGTTTAATCAAGCATAAAAGAATTCATTCGGGTGAAAAACCGTATTCATGTGATTTTTGTAATAAAGCATTCAATCGACAAAGTATTTTAATTGTACACAGACGAACTCACACGGGAGAAACACCATTTACTTGCGAAGTTTGTGGGAAAAAATTTAGTCATAAAAGTAGTTTAAGTAAACATAAAACAATTCACATCCAAGACGATCGTATCAATGAAGTATTTGACGAAGAAAATGATTTAGTTAAAAAAGATGCTGAAAAACTATTTTCACTTGACTTGGATGATAAAAAACTTGAAAAAAATAATAAATTTAATGAAGAATTCACAAAAAATGAAGTCATTGAAGAAGAAAATGTTCAAATTAAAGAAGAAATAAATTTGCAACAAGTATTGATTAAAGAGGAAATATTTGAAGAAAATGACACAATGGTGGCGATGATATAA
Protein Sequence: MEDGLIVVKHGIGKSEVKLGKEETLDENITTENVLIKQEIDLEEIFIKEEISEESDNLEHELITAEYETDELEDSASRFQENKPYSCEFCDKTFTLASSLKRHQRTHNGEKSFSCEICDKKFSQKAYLAQHKRIHTGFKPFSCNICDKKFTKYPNLINHLRTHTGEKPFSCDICGKKFTVVNGLNRHKVNHTGERAFTCEICNKSFTHNNYLIGHQRIHTGEKPFSCKYCDKKFTQYPNLMDHIRTHTGEKPFSCKICEKKFSWQSSLISHNRIHTGERPFSCEICDKTFTQHSSLKTHHKKFHTGKKRLSCEITTEENVQIKEENETDNLEDSTSRFQANKPFSCDFCDKRFKDRRNLVVHHRVHTGEKPFSCEVCERKFTQHGALKRHKVIHTGEKLFSCEVCDKKFSLQSILDRHKIIHIQDNRADEVFEEENVLIKEELIDIDEKPFLLGLNDEKLEKNNKFNEEYTKNEVIGEENVQIKEEINLEQVLIKEEAFEENNPMEQLKHATDQFETITVSKRLKNKKYSCDFCHMAFSRRFSLKRHHTIHARERLDKRNEIIEEENVQIKENLIKLEGNYLNTTENENIKLKAKTVSKSRKNIPYSCDFCKKTFSRRSNLIKHKRIHTGVKPFSCKICDKQFRWRHSLISHNRIHTGERPFSCEICNKTFTQQSSLNTHKEIHKQMDLLKDPTDQLQKRTVPKRQKNKKYSCDFCKKIFSRRGNLIEHQRTHTDEKPFSCKICDKQFRWPHSLVSHNRIHTGERPFSCEICDKTFTQQSSLNTHKEIHTREKCFSCEICSKNFNHRTSLVRHKRTHSVHQQTGLNLTHEVFEEESDLIKEEFDDGKLEEENTKNEILLEKNNHIKEEVNKELVVIKEETLEETDSMEQLKDTTEQLEDSASKSQQNKPYSCDFCNKRFSLKSVLIIHKRIHSGEKPFSCEVCGKKFTQQSSLKTHQVTHTGEKTFSCDVCDKKFSLQSVLIVHKRTHTGEKPFSCDVCDKKFSQYSTLKTHKVTHTGKRTFSCEICDKKFNQQTNLNRHQMVHTGEKPFSCEICGKKFGQKKDVIQHKRIHTGEKSFSCEICDRKFIQPGALKRHKVTHTGEKLFSCDVCDKKFTHKSSLIKHKRIHSGEKPYSCDFCNKAFNRQSILIVHRRTHTGETPFTCEVCGKKFSHKSSLSKHKTIHIQDDRINEVFDEENDLVKKDAEKLFSLDLDDKKLEKNNKFNEEFTKNEVIEEENVQIKEEINLQQVLIKEEIFEENDTMVAMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -