Basic Information

Insect: Chrysoperla carnea
Gene Symbol: -
Assembly: GCA_905475395.1
Location: FR997757.1:3866490-3870218[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 33 0.00034 0.0074 17.1 0.4 1 23 44 66 44 66 0.97

2 33 0.00012 0.0027 18.5 0.2 1 23 72 94 72 94 0.95

3 33 1.5e-07 3.2e-06 27.6 0.8 1 23 100 122 100 122 0.98

4 33 0.0072 0.16 12.9 4.7 2 23 129 150 128 150 0.92

5 33 0.00014 0.003 18.3 1.2 1 23 156 178 156 178 0.97

6 33 0.0006 0.013 16.3 4.2 1 23 184 206 184 206 0.97

7 33 0.015 0.32 11.9 2.0 3 23 214 236 212 236 0.93

8 33 0.0031 0.066 14.1 0.2 1 23 264 286 264 286 0.97

9 33 0.019 0.41 11.6 2.9 1 22 367 388 367 388 0.95

10 33 1.2e-05 0.00025 21.7 1.5 1 23 395 417 395 417 0.98

11 33 9.7e-06 0.00021 21.9 3.1 1 23 423 445 423 445 0.98

12 33 5.8e-06 0.00013 22.6 0.4 1 23 451 473 451 473 0.98

13 33 0.038 0.81 10.6 0.7 1 23 479 501 479 501 0.95

14 33 4.2e-05 0.0009 19.9 3.0 1 23 507 529 507 529 0.97

15 33 1.8e-05 0.00039 21.1 1.6 1 23 535 557 535 557 0.98

16 33 0.0021 0.046 14.6 3.0 1 23 611 633 611 633 0.98

17 33 0.0017 0.036 14.9 2.7 2 21 715 734 715 735 0.93

18 33 0.00027 0.0059 17.4 0.7 1 23 741 763 741 763 0.94

19 33 8.5e-06 0.00018 22.1 1.0 1 23 769 791 769 791 0.97

20 33 0.0001 0.0023 18.7 6.7 1 23 797 819 797 819 0.96

21 33 1e-05 0.00022 21.9 0.3 1 23 832 854 832 854 0.97

22 33 0.00056 0.012 16.4 5.7 1 23 860 882 860 882 0.96

23 33 7.3e-06 0.00016 22.3 0.9 3 23 890 910 888 910 0.98

24 33 3.5e-06 7.6e-05 23.3 1.6 1 23 916 938 916 938 0.98

25 33 1.9e-06 4.1e-05 24.2 1.2 1 23 944 966 944 966 0.98

26 33 5.7e-05 0.0012 19.5 0.4 1 23 972 994 972 994 0.96

27 33 0.15 3.3 8.7 0.4 1 23 1000 1022 1000 1022 0.94

28 33 7.5e-05 0.0016 19.2 1.5 1 23 1028 1050 1028 1050 0.95

29 33 5.4e-06 0.00012 22.8 0.3 1 23 1055 1077 1055 1077 0.98

30 33 0.00024 0.0053 17.5 2.5 1 23 1083 1105 1083 1105 0.98

31 33 2.4e-07 5.2e-06 27.0 2.2 1 23 1111 1133 1111 1133 0.98

32 33 4.2e-05 0.0009 19.9 1.9 1 23 1139 1161 1139 1161 0.99

33 33 2.6e-05 0.00056 20.6 1.4 1 23 1167 1189 1167 1189 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	33	0.00034	0.0074	17.1	0.4	1	23	44	66	44	66	0.97
2	33	0.00012	0.0027	18.5	0.2	1	23	72	94	72	94	0.95
3	33	1.5e-07	3.2e-06	27.6	0.8	1	23	100	122	100	122	0.98
4	33	0.0072	0.16	12.9	4.7	2	23	129	150	128	150	0.92
5	33	0.00014	0.003	18.3	1.2	1	23	156	178	156	178	0.97
6	33	0.0006	0.013	16.3	4.2	1	23	184	206	184	206	0.97
7	33	0.015	0.32	11.9	2.0	3	23	214	236	212	236	0.93
8	33	0.0031	0.066	14.1	0.2	1	23	264	286	264	286	0.97
9	33	0.019	0.41	11.6	2.9	1	22	367	388	367	388	0.95
10	33	1.2e-05	0.00025	21.7	1.5	1	23	395	417	395	417	0.98
11	33	9.7e-06	0.00021	21.9	3.1	1	23	423	445	423	445	0.98
12	33	5.8e-06	0.00013	22.6	0.4	1	23	451	473	451	473	0.98
13	33	0.038	0.81	10.6	0.7	1	23	479	501	479	501	0.95
14	33	4.2e-05	0.0009	19.9	3.0	1	23	507	529	507	529	0.97
15	33	1.8e-05	0.00039	21.1	1.6	1	23	535	557	535	557	0.98
16	33	0.0021	0.046	14.6	3.0	1	23	611	633	611	633	0.98
17	33	0.0017	0.036	14.9	2.7	2	21	715	734	715	735	0.93
18	33	0.00027	0.0059	17.4	0.7	1	23	741	763	741	763	0.94
19	33	8.5e-06	0.00018	22.1	1.0	1	23	769	791	769	791	0.97
20	33	0.0001	0.0023	18.7	6.7	1	23	797	819	797	819	0.96
21	33	1e-05	0.00022	21.9	0.3	1	23	832	854	832	854	0.97
22	33	0.00056	0.012	16.4	5.7	1	23	860	882	860	882	0.96
23	33	7.3e-06	0.00016	22.3	0.9	3	23	890	910	888	910	0.98
24	33	3.5e-06	7.6e-05	23.3	1.6	1	23	916	938	916	938	0.98
25	33	1.9e-06	4.1e-05	24.2	1.2	1	23	944	966	944	966	0.98
26	33	5.7e-05	0.0012	19.5	0.4	1	23	972	994	972	994	0.96
27	33	0.15	3.3	8.7	0.4	1	23	1000	1022	1000	1022	0.94
28	33	7.5e-05	0.0016	19.2	1.5	1	23	1028	1050	1028	1050	0.95
29	33	5.4e-06	0.00012	22.8	0.3	1	23	1055	1077	1055	1077	0.98
30	33	0.00024	0.0053	17.5	2.5	1	23	1083	1105	1083	1105	0.98
31	33	2.4e-07	5.2e-06	27.0	2.2	1	23	1111	1133	1111	1133	0.98
32	33	4.2e-05	0.0009	19.9	1.9	1	23	1139	1161	1139	1161	0.99
33	33	2.6e-05	0.00056	20.6	1.4	1	23	1167	1189	1167	1189	0.98

Sequence Information

Coding Sequence: ATGGCAAACAATCTGTTTGGAAATAATTCTTTATACGATGCCGAAGAAAACATAAAAAATGAACCCATTAAGAATGAAACACCACAAGAAAATGACGACTTTCCAGACAATGAAATTGACAAAAATCAATTTGCATGTGATGTTTGTGAAAAAGTTTATACCAGAATAAGTTATTTAATTCAACACAAACGGCTTCATACAGGCGAAAAACCTTTTTTATGTGAATTGTGTGGTAAAGGTTTTCCTAGTAGAAGTTATTTAGTTACTCACGAACGAGTTCATAGTGGTGAAAAACCGTATGTATGTGAGGTTTGTGATAAAACATTTACATCGTCTAGTAATTTAGTGAAACATAAACGAATCCATACCGGAGAAAAACCTTATTTATGTGATTGTTGTGAAAAAACATTTACCACGTCAACCAGTTTACTTAAGCACAAACGAACGCATACTGGATTAAGACCGCATTCATGTGACGTATGTGATAAAGCATTCGGGGAGAAACAACAACTGGAAAGGCATAAGAGAATACATACCGATGAAAAACCTCATACTTGTGAAATTTGTGATAAAAAATTTGGTGAAAAACATCAGTTAACGCGACATAAATTAGTGCATTCAGTGGATAAACCTTTTTTGTGCGACTTTTATAAGTGTAATAAACGGTTTGTTGAGCAACGTCAGTTAGATAGACATAGAAAAATTCATAAAGGAGAAAATCCTGCTTATTTTGATTATGATAAGAATAATGGAAATGAAAATAAACAAAGTTATAGTGCAGTGAAACCTTACGCATGTGATTTTTGTGAAAATCAATTTACTACCCCAAGTGAATTAGTAACGCATCGATTAATTCATACCGTTCAAAAATCATATTTAAACGATGTTTATAACAAAAGTTTTAACCTGGTGCGAAGATTATTTCAAGATGAAAATAATCCTTCATCGTACAATGAAGAACCAAGTAAGTCCGAACAGAAAGAATCAAACGATTTATTAATTAAAGATGAATTAATACGCACCCCTGATTTTCCGAAAAATGAAGTTCCGAATCAAAATGAAAATGACGTTCCACAGAATGTACCGGAGCGAAAACGTTTCACATGTGAACATTGTGATAAAATTTTTGGTACGGAACAAATGGTAAAGCGACATCGATGCACGGTTGTTATTGAAAAAGTTTATTCTTGTGAAATTTGTAAGAAAGTTTTTACTAAATCAAGCAGTTTAGTTCAACATAAAAGATTGCATACAGGAGAAAAACCGTATTCCTGTGATGTTTGCCAAAAAGATTTTCGTACAAATAGTCATTTGGTTCGCCATAAAAGAGTTCATACCGGTGAAAGACCATATACATGTCCGGTTTGTTCGAAAAGTTTTAGTACAAGTAGTCTTTTAGTCGGACATAAACGAATACATACCGGAGAAAAACCATATGAATGTACAACTTGTGGTAAACGATTTGGTTGGAAAAATATGTTAGATAAACATAAATTAATTCACACCGGAGAGAAACCATTTGCTTGTGACATTTGCAGTAAATGTTTTAATCAGAAAAATAATTTAGATGCCCATAAACGAACTCATAGTGGTGAAAAACCTTATCAATGTGAGCTGTGTAAGAAAAGATTTACACGAATGGAAAATTTAAACGGACATATGAAACTTCATGCGAGAGATAAACCTTACGTAAGAAGAGCTGAGAAAAAGACTTCAGTACGAGTAGAGAAAATCAAGATAGAAAGAATTGGTAAAAGAAAATCAGCAAGAAATAAGAAAAAGAAATTGGATCGAGAATTAAGATCGACTACACCAAAAGTGGAAGAATCTTATGAATGCGATGTTTGTAATAAAAAATGTACGACATTAACTGATTTATTTAGTCACAAACAAATTCACGACGAAGATACACCCGAACCCGAACCCGTCAATGTCGAAGAAATTAAAATTGAACCGAAAATCGAAATTAAAGAAGAACAGGAAGAAGAAAATGATGGTGATTTTCGTGATTACGATGACGGTGACTTCCGTGATTATGATGAGGATATCGAAAAGATTGAAGAAAAAATTGAAAAACCAGAGGAAACTCGTTCTGAAAATAATACTGAAAAACTTGAAAATGGTACGATTAAAATAGAAAATCGTTGTGAAATTTGTAAAAAAGTATTTTCAACTAGTGAAAAATTAAACAATCATAAATGTAGTAATAAAGACAAACCACACGCGTGTGAAATTTGTGGTAGAAGATTTTCCACGATAAATAATTTAAATCAACATAATTTAATACATACGGGTGTAAAACCGTTTGCTTGCGATACTTGCGGAAAAACATTTACCACGATGGGTAATTTAAATCAACACAAACGATTGCATACAGGAGAAAAACCATTTTTATGCGATCATTGTAATAAAACTTTCACGCAAAAACAACATTTAATCGAACATAAACGAACACATAGTGAAAAATCACCATCAGTGAAAACCGAAAAACCGTATGCTTGTGAAACATGTGGAAAAACATTTACTTCCGTTGGGAATTTAAATGTACATAAACGATTACATACGGGTGAAAAACCACATGCTTGTGATGTTTGTGAAAAGCGATTTACTCAGAAACATCATTTAATCGAACACAAACGTATTCATACCGGGGAAAGGCCCTTCGGTTGTGAATTATGTGATAAGAAATTTACAACGTCAAGTGATTTAGTTAAACACAGACGAATTCATACGGGAGAGAAATTGTATCCATGTGAATATTGCGATAAACATTTCACTAGGTCAGGCGGGTTGATTAAGCATAAACGAATCCATACTGGTGAACGACCTTATGCTTGCACCGAATGTGAAAAACGATTTACTACATCAAGTTCTTTAGTTAAGCATAGACGCATCCACACCGGAGAAAAACCGTATCTATGTGAGGTTTGTAATAAGGCATTTATCTCGAATAATCAACTCGTTCGGCATAAACGAATTCATACAGGGGAGAAACCGTATTTATGCGATATTTGTGACAAAAAATTCATGTGGATGGAATCGTTAGTTAAACATAAGCGAGCACATTCGGGAGACAAACCATTTTTATGTGACTACTGTAGTAAAAGATTTGCTGAACGATCTCAATTAGAAAAACATAAGCGAGTTCATACGGAAAAACCGTATCCATGCGATGAATGTGAGAAAAGATTTCCACGCTTGGAAAATTTGATTAAACATAAACGTGTGCATTCGGGTGAAAAACCGTATGCATGTGATCTATGTGAGAAGAAATTCGCTCAAAAACAACATTTGAATGGACATAAACGTACGCATAGCGGTGTAAAACCGTATTCGTGCGATTATTGTGAGAAAAAATTCACGACATCAAGTGATTTAAAGAAACATTTGCGAGTTCATACTGGTGAAAAACCGTATTCATGTGAATTTTGTGATAAACGATTTAATACAACAAGCGGTTTGGCTCAACATAAACGTACCCATACTGGTGAAAGACCGTATTCGTGTGACGTGTGTGATAAAGCATTTACGATTAAAAGTCATTTGGTTAGTCACAAACGAATTCATAGTGGTGTAATTAAACCGGATTTATGTTACGTTTATGATAAAAATTTACCATTATGGGGTCAGTTTACCAATTAA
Protein Sequence: MANNLFGNNSLYDAEENIKNEPIKNETPQENDDFPDNEIDKNQFACDVCEKVYTRISYLIQHKRLHTGEKPFLCELCGKGFPSRSYLVTHERVHSGEKPYVCEVCDKTFTSSSNLVKHKRIHTGEKPYLCDCCEKTFTTSTSLLKHKRTHTGLRPHSCDVCDKAFGEKQQLERHKRIHTDEKPHTCEICDKKFGEKHQLTRHKLVHSVDKPFLCDFYKCNKRFVEQRQLDRHRKIHKGENPAYFDYDKNNGNENKQSYSAVKPYACDFCENQFTTPSELVTHRLIHTVQKSYLNDVYNKSFNLVRRLFQDENNPSSYNEEPSKSEQKESNDLLIKDELIRTPDFPKNEVPNQNENDVPQNVPERKRFTCEHCDKIFGTEQMVKRHRCTVVIEKVYSCEICKKVFTKSSSLVQHKRLHTGEKPYSCDVCQKDFRTNSHLVRHKRVHTGERPYTCPVCSKSFSTSSLLVGHKRIHTGEKPYECTTCGKRFGWKNMLDKHKLIHTGEKPFACDICSKCFNQKNNLDAHKRTHSGEKPYQCELCKKRFTRMENLNGHMKLHARDKPYVRRAEKKTSVRVEKIKIERIGKRKSARNKKKKLDRELRSTTPKVEESYECDVCNKKCTTLTDLFSHKQIHDEDTPEPEPVNVEEIKIEPKIEIKEEQEEENDGDFRDYDDGDFRDYDEDIEKIEEKIEKPEETRSENNTEKLENGTIKIENRCEICKKVFSTSEKLNNHKCSNKDKPHACEICGRRFSTINNLNQHNLIHTGVKPFACDTCGKTFTTMGNLNQHKRLHTGEKPFLCDHCNKTFTQKQHLIEHKRTHSEKSPSVKTEKPYACETCGKTFTSVGNLNVHKRLHTGEKPHACDVCEKRFTQKHHLIEHKRIHTGERPFGCELCDKKFTTSSDLVKHRRIHTGEKLYPCEYCDKHFTRSGGLIKHKRIHTGERPYACTECEKRFTTSSSLVKHRRIHTGEKPYLCEVCNKAFISNNQLVRHKRIHTGEKPYLCDICDKKFMWMESLVKHKRAHSGDKPFLCDYCSKRFAERSQLEKHKRVHTEKPYPCDECEKRFPRLENLIKHKRVHSGEKPYACDLCEKKFAQKQHLNGHKRTHSGVKPYSCDYCEKKFTTSSDLKKHLRVHTGEKPYSCEFCDKRFNTTSGLAQHKRTHTGERPYSCDVCDKAFTIKSHLVSHKRIHSGVIKPDLCYVYDKNLPLWGQFTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -