Ccar020139.1
Basic Information
- Insect
- Chrysoperla carnea
- Gene Symbol
- zfy1_1
- Assembly
- GCA_905475395.1
- Location
- FR997754.1:127755610-127758027[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.28 2.2e+02 2.3 0.1 18 24 12 18 5 19 0.85 2 10 0.0015 1.2 9.5 1.4 17 44 191 215 188 215 0.92 3 10 0.93 7.5e+02 0.6 2.8 16 26 218 228 216 231 0.88 4 10 0.003 2.4 8.6 4.9 6 28 228 256 226 269 0.77 5 10 0.27 2.2e+02 2.3 1.3 12 26 275 289 259 297 0.79 6 10 1.2e-07 9.5e-05 22.7 1.2 6 43 297 331 293 332 0.93 7 10 1.4 1.2e+03 0.0 2.1 19 41 342 361 339 363 0.73 8 10 0.011 8.9 6.8 4.1 17 43 368 391 357 392 0.84 9 10 1.2 1e+03 0.2 1.2 16 38 396 415 393 420 0.81 10 10 2.2 1.8e+03 -0.6 1.8 15 26 423 434 414 445 0.76
Sequence Information
- Coding Sequence
- ATGGATACATGTTTAATAACTGATTTTGAGAAAGTTTGCCGAATATGTATGAAATTCGATAAAACGTTTCTAGCAATTACTTCGTTTAAAATAATTGATATGATAATAGCATGTGCTTCAGTACAGATTTGGGAAAATGATGATCTACCAAATCAAATTTGCCAAGCTTGTTTTCTACAATTGCAAAATACCATAAATTTCAAACAGTTATGTGAAAATTCAGATAATACATTTCGTCAAATTATTCAGCAAAGCAAAATAAATTTATCGAATAATGAAAACAATTTTCATAGCGTAAAAGATGAAAAATTCGAAGATTATGCAGATGATGATCATTCTTTAGGAGATGTTAAAGAAGAAGATATTTCTGAAGATATCAAAAATGAAAATACTTTGGAAAATGTAAAAATTAATATTGGTCACAATGAAGATGATTCCAAAAAATTAGATACGAACAGCATATTGGAAATTACAAACAAAGATAAATCGGAAGAGGACAAAATTTCACGAACAGAATTAGAAAAGGAAAGTGGTGAAACTATTACGGACGAAGTAAATGTGATAGAATCGTTCACTTGTGAAAAGTGTAAGAAAGAATTTAAAACAGTATGGAATTTGGGTCAACATATGCATCGTAACCATCGAGTGAAAGCGATAAAGTGTAAAAAATGTAACCAGAAATATTATCATCCACTAACTTTAAAATGGCACGAGGACATTAAGCACAACAATCATATATGTAACATATGTAACAAAAAATTTTCAAATATTTATAAATTAAAAGATCATAGGCGATTCAGGCATACAAAGGAAGGGCGTACACTCATAAGAGAAAATGTAGCATGCCATATTTGCGGTAAATTAATGCAGAAAGGCAGTTTAAAAATCCACATGACAATTCATAAAGATGATCGTGATAAAATTACATGTGAGATATGTTCGAAAACATTCGTACGTCAGGATGGTTTAACCAGACACATGAAACGTGTACATGGGAATGAAACGCCTCCATGTAATCATTTATGTAATATTTGTGGGCATGCGTCACGTTCAGCATTTGATTTACGTAGACATTTAAGGACTCATTCAACAGAACGACCGTATGCATGTGATCATTGTGATAAAACGTTTCGACGTGAAGATAATTTAAAAGAACATATCGCACACGTTCACTTAAATGTACGAAAATATCAGTGTTCATTTTGTTCACAAGCTTTTCATGAAAAGAAAGGTTTACGGAATCATGAACGACGGCATACCGGTGAAAAACCGCATAAATGTGAAGTGTGTGGTAAAGCGTTTATACAAAAATATGCATTGAAAGTTCATACAAAAATACATAAAAATTCAAGAGAGAACGTGGCAATCAATTTAACAGGCGTGCCAGGCCTCATGTTTTAG
- Protein Sequence
- MDTCLITDFEKVCRICMKFDKTFLAITSFKIIDMIIACASVQIWENDDLPNQICQACFLQLQNTINFKQLCENSDNTFRQIIQQSKINLSNNENNFHSVKDEKFEDYADDDHSLGDVKEEDISEDIKNENTLENVKINIGHNEDDSKKLDTNSILEITNKDKSEEDKISRTELEKESGETITDEVNVIESFTCEKCKKEFKTVWNLGQHMHRNHRVKAIKCKKCNQKYYHPLTLKWHEDIKHNNHICNICNKKFSNIYKLKDHRRFRHTKEGRTLIRENVACHICGKLMQKGSLKIHMTIHKDDRDKITCEICSKTFVRQDGLTRHMKRVHGNETPPCNHLCNICGHASRSAFDLRRHLRTHSTERPYACDHCDKTFRREDNLKEHIAHVHLNVRKYQCSFCSQAFHEKKGLRNHERRHTGEKPHKCEVCGKAFIQKYALKVHTKIHKNSRENVAINLTGVPGLMF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00333285;
- 90% Identity
- iTF_00333285;
- 80% Identity
- iTF_00333285;