Basic Information

Gene Symbol
TRERF1
Assembly
GCA_905475395.1
Location
FR997755.1:62977255-63006773[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.1e-09 1.6e-06 28.5 0.3 3 46 1256 1299 1254 1299 0.96

Sequence Information

Coding Sequence
ATGACTACTATGGATACTTGTGCAACTGAGGAAGCCAGGAAAACTGTTAACATCACAACGAATGAGGTAACAAAATTAACAGTGAAGCGTGCTCGTCCAAAAGCTGCATCACCAAATCGACAAGGACCACAACAGTGTCAAGTCTGCTCGAAAGTATTTGGCAATGCATCAGCATTAGCAAAACATAAATTAACGCATAGTGATGAACGAAAATATGTGTGCTCAATGTGCGGCAAAGCATTCAAAAGACAAGATCATTTAAATGGTCATATGCTAACACATCGAAATAAAAAACCCTACGAATGTAAGGCAGAAGGTTGTGGAAAATCATACTGTGACGCTCGATCCTTGCGTAGACACACAGAAAACCATCATAGTTCATTGTCTTCAGCGCCGACGGGAGCAGCTGCACTTATTAGCGGCAATGCTTCTGTCAGTACATCAACATTATCACCAGCTCAAGGAGCTGCATCAGGAGATGCAGCTTCGCCGCATGGTGCAGCTTCATCTACTTGTATACAATATGCGCCACCACCAAATGGTAATGGTGCAAATAATGGAGGCGGTGATGCAAAAAATACCGATGGAAAGGGAAATAAAAATAATTCTGCTGGAAACCATCATACTGCTGGCGGTAATGGTGCTTCCACCACGACCAGTATGAAATCTGGAAAAAGTCAACTACAACAATTATTAGCTAGTGAACCTACTAACAAGAATGGAAGTAATACACCCAATAATGACGGCTTAACAAAACAACAATTGGATTTAATACATCAAATAATGGAACAAACACAAAGACAATCTCAACAAATCACAGCGGCAGCGAATGCAAAATCAACGAATGCAAAAAGTTCGAATCATTCAAAGCAAAAAGTATCCAGAACATGGAGTTCACCGGCACAAAGCAATGTATTTAAATCCAATGCGTCAAATTCAACAACTACAACGACTGGTGGCAATCAAGTGATTACAACAAGTAATGGAACAGGAGGAACAAATAATACGACAGGCAATCATGTTAACAATAATAATAATTTGAACACAAGTAATAATTCAACACAACCTATGCAAATTATACCAAAACCAGTGGAGTGTAATTTATGTCATCGAAAGTTTAAAAATATTCCGGCTTTAAATGGTCACATGAGATTACATGGTGGTTACTTTAAAAAGGACGCAGAAAATAAAAAATGTGAAAAGAAAGAATCAGTAGGCCCACCATTACAAACAGCTAGTGTAAGCGTTCGGGCATTAATTGAAGAGAAAATCATTAACAAGCGTAGCATAAATCCTCAAAATGTAATTTCAAACAATACATCAACAGTTGCAACTTGTAATGCCTCCACTACTACGACAAACAGTTCGGCAGCAGATTCAATAATTCGTACATCAACCACTACAGCAAGAGCTGCAGTAACAAGTACAAATGCACCGCCATTATTCCCACTCACTAATAATACGAATTCGAATGAACTAAAAGTAACATCATTTGTTATACCAGCACCTCCACAAAATACTTCATCAACGCTGCCAATTGATAAGAATCGGCGGCATAGTGATACAGAAAAATTCACGGTACCACGTGCCCCGTCTGTAAACAATACAGCGCAACATGAAGCCGAGGCGTTAGCGGATCTAATACTGAAACGTAGTGCGAAAGTTGTAAAGCGTACTGTCTCTGATCCAGGACAGCTACCACAATCCACAACTCAACAACAACAATTGCAATTGCAATTTGAGCAGGCAAATGAAGCATTCTCACTAGCGGGAGTAACATTTCAGCATGATGAGTCAACAAGTGAATATTTTTCGTCGTCGCTGCAAGAAGATGTGTTCCACCAAGTGCAAGAAACTATGTTATTGCAAGGTGTAGATGCAGCTCAATTAGCTGAAAGTATTCAGTTACAAGCCTCATCATTACTACAAGGACAATCAACAGAAGAACATTTACAAGACATTGCCTCGTTAGAGGAATATGCAAATGTTACGGCAAGCTTACAGCGAGACACATCAAGTACACCAAATCATACGGTAGTAAATCAAGAATTGCAAGCTGTATTAGATTCACCATTACCTGAAAGTTTAGCTGAATTTAGTACGTATCATTCCACTGGAATTAACTCACCAAAAGATGTTCTCTCAAATTATACATCAACGCCATCACCAATGCCCTCATATTCAACGTCACCTCACTTGTCATTGGCTACTCAAAGTCCTCTACAATCACCATTAATACGTCATCAAGATTCCCCTGGTTTTGCATATCCTACACCACCAGCAAGCCATGAAGGACAATCTCCAGGATTCTCCAATACACATTTATTACCGTTATTATCTCCACAAACAAATGAAAGCTTTTCTACTCAGCAGCATCGTGAATTAGATGAACCTCCACAAGCCTCGAGTCCATTATCTGCCGCGTTTTATACTTCAACCATGTCAAGCGCCGCAGCAGTAGAAGAAGCATTGGAAGAAGTTTTACCTGGAGAAAACATTGTACCCGATGATGTATATACAACGTTAACAAACTCACCGCCTCCCACGCAAGATGATTCACCAAGTGAACCGTCTCAAAATTTAACAGGAAATCATCGAAATACGATACAAACTTCAAGTGTACCAGTGGTTTCTTCGCCACAAATTATTTATCCAATGTCACCACATTATACTTTACAATCACAAATGATGCCAAATTCTGATGATCCGTTATTGTCAAGTAGTCCAAAAGATTTTTCATCGAGGAAAAAATTTGAATTTGGTAGTTTTCAATCATTTAAAATTGTTTCTGGTAATAGTATTGTGGATTTAACTAATCCAGCACTAACGGGTATCTTAGTTGATAGTAACGGTGAATTGAAATTCATACAAACTTCAAGTCCATTTACAACCAAAAATATTGTGGTCACATCAACGGGAAATTTAAATGCAGTGACATCTCAAGCCCAAGGGCCAACAACAGTACAAATAATTCAGCAACCAAGCACCCAATATATAACACCCAGTAAAATAAATATAGCATCCAGGCCAAAATTACATATTGCGGTAGATAATTTAAAACAAGAAGAGCCCGATGATGTGTTTTTGAGTCCTACTACGATACCTGCAAGTCCAATTCGTGCGTCAAGAAAACGACCACGTTCAGAACCGCCCTTAGTAGTACCCATAGTTCATCAATCACGTTTGCGAGCATCGCGAGGTCGACCTCCAGGTGCAGCCCCATACACACCTGCACCAATGTTAAATCCATCACGCGTGGGACCTGGTTTATATGCTCATGCCAAATTAAAAGCAAATCTTAATCAATCTAATAATCGACTTAATATAAGCTTAAATCATATATTAAATCGGAACAATTCAAAGTCAAATAGTATCGCTTGCGATAAATTGTTATCGAGCCAGTTATTTAGTGATACAATACCAGAGAGTGATTCAACGCCGCACATAAACGTAGGCCCACAATATCAATGTACAATTCCCCCACAAATCAAAATGACTGGGAAAGACAATCGTGAACCCAATTATGAGCATTTGCTATGGGATCCTGGTATTAATTCTATATGCACTGAGACTGAGCTAAATATGTACCTTGAATTAGCTTGCTGTGCTGCTGTTCCTGGCGGTGGTCGGAATAAGGAATATGCTTTACATTTGTTGTATTTATGTGGAGGAAACATACAAGAAGCGATGTTACGGCTAATGCATCCATCCCCAGCTCTACCTAAAGACCATAGTTTATTGTCGTATCAATATTGTGAAGGAGATTGTTGGAGCCAAACAGAAACCGAGGCATTCCATAGAGCACTATTAAAGCATAACAAAGATTTTTACCAAGTGGCTAAAGAGGTCCAAACGAAAACCACAAAACAATGTGTACAGTTCTATTACCTTTGGAAAAAAATATGTTCTGATGAATATAAACGAATACGCTTGAATAATGGTCGGAGTCATCGTGATACACCGCCCATAAATAGTAATGATAGTAGTAATGGATTGATGGATTGTGATACTTCACCGAGTCAAACGCAACCTGAGCTACATAGAACTTTTACTTGTGAATATGCTGATTGTACTGCTAGTTTTAATTCAAGAGCAGCATTAAATGGTCATATTCGTATACATGGAGGCACAGTACGTAGATCGCCAACTCCAAACCCCAATAACTACAATCAATCGTCACTACTCTTACAACAGCAACACCAGCAATTAAATTCCCTAACATCGAATTTATTAATCGATAAACGGACTCAATTACAAATCTCATCATCACAAGCTGCAGTTACGTCATCTACATCAAATTGTTTAGTAAATTCAAATGATGTCACCACATCACGTATGTTACAACAACAACAGCAACACGATCATCATCAACACTCTGAGGAATTTCCTTGTAAAGTGTGTGGGAAAGTATTTTCAAAAATAAAAAGTCGAAGTGCTCATATGAAATCACATCGACCACCAGATGCTGAACCACGCCGCCAATCAAAAAATCAACAATCATCATCGTCCACAAATAACAATAATAATCATACAGAAATTATTTCATCGTCATCCTCGTCATGTTCCTCATCTTCGTCAAATATGTCCACGACATCTACAATATCATCAGCATACGACGCTTTTTCACCAATGACGCCTACCAATGTGACCGTTAATTCACCTCTTGTTACCTCATCGCAATAG
Protein Sequence
MTTMDTCATEEARKTVNITTNEVTKLTVKRARPKAASPNRQGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSSLSSAPTGAAALISGNASVSTSTLSPAQGAASGDAASPHGAASSTCIQYAPPPNGNGANNGGGDAKNTDGKGNKNNSAGNHHTAGGNGASTTTSMKSGKSQLQQLLASEPTNKNGSNTPNNDGLTKQQLDLIHQIMEQTQRQSQQITAAANAKSTNAKSSNHSKQKVSRTWSSPAQSNVFKSNASNSTTTTTGGNQVITTSNGTGGTNNTTGNHVNNNNNLNTSNNSTQPMQIIPKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDAENKKCEKKESVGPPLQTASVSVRALIEEKIINKRSINPQNVISNNTSTVATCNASTTTTNSSAADSIIRTSTTTARAAVTSTNAPPLFPLTNNTNSNELKVTSFVIPAPPQNTSSTLPIDKNRRHSDTEKFTVPRAPSVNNTAQHEAEALADLILKRSAKVVKRTVSDPGQLPQSTTQQQQLQLQFEQANEAFSLAGVTFQHDESTSEYFSSSLQEDVFHQVQETMLLQGVDAAQLAESIQLQASSLLQGQSTEEHLQDIASLEEYANVTASLQRDTSSTPNHTVVNQELQAVLDSPLPESLAEFSTYHSTGINSPKDVLSNYTSTPSPMPSYSTSPHLSLATQSPLQSPLIRHQDSPGFAYPTPPASHEGQSPGFSNTHLLPLLSPQTNESFSTQQHRELDEPPQASSPLSAAFYTSTMSSAAAVEEALEEVLPGENIVPDDVYTTLTNSPPPTQDDSPSEPSQNLTGNHRNTIQTSSVPVVSSPQIIYPMSPHYTLQSQMMPNSDDPLLSSSPKDFSSRKKFEFGSFQSFKIVSGNSIVDLTNPALTGILVDSNGELKFIQTSSPFTTKNIVVTSTGNLNAVTSQAQGPTTVQIIQQPSTQYITPSKINIASRPKLHIAVDNLKQEEPDDVFLSPTTIPASPIRASRKRPRSEPPLVVPIVHQSRLRASRGRPPGAAPYTPAPMLNPSRVGPGLYAHAKLKANLNQSNNRLNISLNHILNRNNSKSNSIACDKLLSSQLFSDTIPESDSTPHINVGPQYQCTIPPQIKMTGKDNREPNYEHLLWDPGINSICTETELNMYLELACCAAVPGGGRNKEYALHLLYLCGGNIQEAMLRLMHPSPALPKDHSLLSYQYCEGDCWSQTETEAFHRALLKHNKDFYQVAKEVQTKTTKQCVQFYYLWKKICSDEYKRIRLNNGRSHRDTPPINSNDSSNGLMDCDTSPSQTQPELHRTFTCEYADCTASFNSRAALNGHIRIHGGTVRRSPTPNPNNYNQSSLLLQQQHQQLNSLTSNLLIDKRTQLQISSSQAAVTSSTSNCLVNSNDVTTSRMLQQQQQHDHHQHSEEFPCKVCGKVFSKIKSRSAHMKSHRPPDAEPRRQSKNQQSSSSTNNNNNHTEIISSSSSSCSSSSSNMSTTSTISSAYDAFSPMTPTNVTVNSPLVTSSQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01061458;
90% Identity
iTF_00333445;
80% Identity
iTF_00333445;