Ccar007399.1
Basic Information
- Insect
- Chrysoperla carnea
- Gene Symbol
- snpc-4
- Assembly
- GCA_905475395.1
- Location
- FR997757.1:6602266-6606128[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.76 1.1e+03 0.2 0.1 30 44 249 264 240 266 0.71 2 5 2.4e-07 0.00035 21.0 0.0 3 38 274 311 272 314 0.92 3 5 1.6e-11 2.4e-08 34.3 0.0 3 44 328 373 326 375 0.96 4 5 2.2e-10 3.3e-07 30.7 0.0 1 44 381 424 381 426 0.96 5 5 2.7e-08 4e-05 24.0 1.9 3 45 434 483 433 484 0.88
Sequence Information
- Coding Sequence
- ATGTCGTTTGTTTCTGAAAGTATTATTGAAGCCGAAAAAGGTGATATAGAAAAGCTAGATGCATTTTTAAATAGTCAAGAATCGAGTAATGACTCAGATACTAGTTTGGATGATGAAGAGGATGTTGATTTAGACGCTCCAGTAAATGATCCAGTTAGTATTACGCCAAACTCAAACATAAATGTTGAGTTTAATGATGTAACTCCTTATAATCAACAAGTCCAAACAATTTTATCAAACGTATCCAATTATAATTTGGATACTGTATTAATGTTGAACACCGCTCAACAGAATTTATTAATGGAAGCAATCACTAAGTATCAAAAATTATTGCAAAATTGTGATGAACAATTAAATCGTATTAAAATCATGAAAAATGAATTAACTACAAAGGCAAGGGAAAATAAATTCAGCAGTTGGTTTCGTTGTGGTGTCCCTTATTTTAAAGATAAATCCTTACGGCACAAGTGTCCTTCAAATAAAGATGTTTTTAATAAAATTACAAACGGTGAATTGGCGTTAATAGATTTGCCGCCATGCAGGTTTTGGCTAGCACATGAAAAAGAAGTGTTAAAAAAAGCAGTTTGCGGCCAATCTAAACAGATCAGACTAAGAATGATAAGAGACAAATCAAATAATATACAAAATATTGAACAATGGAAAAATAAACCTGCGGAAGAATGTGTTTTCCCAGTGTATGATAGAAACGTACTTATAGATTGGTTAAAAATATCAATCCATGATTTAAAAAGTCGCCATACTGATGAAGATTGTAAAGCTATGTGGTATCAAAGTTTACATCCCCATTTAAATAATAAACCATACGGTCCTCGAGAAGCACAGAAATTAAAAGAAATCGCTGCTAAACATAATTATCAAAATTGGGATTTAATTGCTGAAGAATTAGGCACAAATCGATCAGGATATTCTGTTTGTTTGTTTAATCGATTAAATCAAGATAAATGTAATAAAAGGACATTAAAATGGACTCCGGATGAAGATAATAGATTAATGTCCCTAATTGAGAAATATAAAATGGGGAATTTTATACCATGGGGAAGGATAGCTCATGCTTTTCCAAATCGTGATAAAACACAAATATATTGCAGATACAATACATCACTTAGAACTGAATTTAAAAAAGGAAAATTCTCGAAACAAGAAGATTTAATGCTAGTAACATTAGCGAAAAAATTTGGTAATAATATTAAAAAAATAAGTAGTTATTTTAAAGAACGTACTGCAACACAAATTCGTATACGTTATACGAGTTTAATATTAAATGAAAATAAGATAAGACCATGGACAGAAGAGGAAGATAAGAAAATAATTGAATTCGTTAAAGAGAATCATAAAGAATCTAAACCGATAAGTTGGAGTAAATTAGAAAAAATTATTGATAATCCATTTAGAAATCGAACAAATATTAGACATCGTTGGAATACTATTAAAAATTATTTAAATAGTTCGTTTGAAGGGGATGTTTCTATAATTCCTAGACCGTCAAAAAAACGATCAGGATCTACAGAAATAAACCAAACTCATTTAGATAAAGTAATGAAAGTTTTAAATAATGAAAAAACAAAAATCTGTGATTTACGTGATATAACCGAAGAAGTTTTATCAACAGAGATTAAACGAGAGTTCATTGATCAATTTCAAAATTTCTTTATACAAAAATTCTTTAAAATAAAATTTAAACGACCTATTGACGACATTTTAGAAATAGATGTTGTTAATATTTTATTCTTGATTAATATATTAAATGGGTGTATTTGTTTGGAATCATTATATCATAAAAAATATAAAAAATGTTATACCGAACATAATGAATTAAAAATTGTGGAGTTTTTACGAGATATTGTTGAGAGAATGAATGAAAATTGTAATGAAACGTTATCAAATTATCTAACAAAAACATATTATTTACCACAGTCTACGGGACATAAAACAATTGATTTAATTATCCCAAAATGTTTTTTATCACTTGATAAAATCGATCATTTGATAGCAGTAACGAAACCATTTTTAAAACATGTGATTTGGAAGGATTCTGAATTAGATGATTTTTATCATAAACCCACTGGACGTTTTGAACGTAACTTAAAATCTCAATTCTTCAAAGATGAAAATTTATTATTAAATTTAGAGAGTACTGTCGTTTCCTCTGCTACATCAATTACCTGTGGTGATTTTCTAGATAATTCTACAGCTAAAAACTATAAAACATCTCTAGTTACAGAAATATTTAAAAAACGTTTTTTAGCTATATTTAATTTTAAATCAATGGAATCAATAGTTAAGGAAATAGTTGATCTGTCGGCACACATGAAAACTGAAATCCCAACAGACGTGGAAACGAAACAATCAAAAGGATTGAAAAAAGGTAGACCTAGAAAAAAATTACCTGGTGGAAGGTTCAAATATGAAAGGGAAGAGGGCGATGATGAAGAAGATCTTTATAATAATCAAATTAAAACTGAACAAAATAAATTATTAACGAAAAATATAAAAGAAGAGCTAATGTCAGAAACTAGTCAAAATGGTATGGAAAATGATGAAATTGAATCTGTTTCAAAAAAAATTAAATTAAATTAA
- Protein Sequence
- MSFVSESIIEAEKGDIEKLDAFLNSQESSNDSDTSLDDEEDVDLDAPVNDPVSITPNSNINVEFNDVTPYNQQVQTILSNVSNYNLDTVLMLNTAQQNLLMEAITKYQKLLQNCDEQLNRIKIMKNELTTKARENKFSSWFRCGVPYFKDKSLRHKCPSNKDVFNKITNGELALIDLPPCRFWLAHEKEVLKKAVCGQSKQIRLRMIRDKSNNIQNIEQWKNKPAEECVFPVYDRNVLIDWLKISIHDLKSRHTDEDCKAMWYQSLHPHLNNKPYGPREAQKLKEIAAKHNYQNWDLIAEELGTNRSGYSVCLFNRLNQDKCNKRTLKWTPDEDNRLMSLIEKYKMGNFIPWGRIAHAFPNRDKTQIYCRYNTSLRTEFKKGKFSKQEDLMLVTLAKKFGNNIKKISSYFKERTATQIRIRYTSLILNENKIRPWTEEEDKKIIEFVKENHKESKPISWSKLEKIIDNPFRNRTNIRHRWNTIKNYLNSSFEGDVSIIPRPSKKRSGSTEINQTHLDKVMKVLNNEKTKICDLRDITEEVLSTEIKREFIDQFQNFFIQKFFKIKFKRPIDDILEIDVVNILFLINILNGCICLESLYHKKYKKCYTEHNELKIVEFLRDIVERMNENCNETLSNYLTKTYYLPQSTGHKTIDLIIPKCFLSLDKIDHLIAVTKPFLKHVIWKDSELDDFYHKPTGRFERNLKSQFFKDENLLLNLESTVVSSATSITCGDFLDNSTAKNYKTSLVTEIFKKRFLAIFNFKSMESIVKEIVDLSAHMKTEIPTDVETKQSKGLKKGRPRKKLPGGRFKYEREEGDDEEDLYNNQIKTEQNKLLTKNIKEELMSETSQNGMENDEIESVSKKIKLN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -