Ccar019653.1
Basic Information
- Insect
- Chrysoperla carnea
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905475395.1
- Location
- FR997754.1:80342606-80504817[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-17 8.5e-15 54.6 0.1 1 45 540 585 540 585 0.96 2 2 3.8e-18 3.1e-15 56.0 0.0 1 43 948 991 948 993 0.94
Sequence Information
- Coding Sequence
- ATGGCGGAATGCTCTTATTCGCGTTGCGTTCAAGAGCGTAGAAATATACGTCGCGAATTGCAAAAATGGACCAAAAATATGGTTTATGTAGTTGGATTGGAACGAGTCGCTGAAGAATTGATGGGTCGAAGGAAATGGAAACTATATCAAGAATCTCTAACAAAGAGCTCGTCCATTGCATCATTATTAGCAAACAATATAAACAATCAACAATTGATACAAGAGCATTTAGCAACAAGTACAATAACTCCAAACAACAACAGTACGATAACTACTACAGCAACACCCTTCTCCTCTTCCATAACAAACAACACCACCGTTGGCACAACGTCCATAATCACCACCACCACCCCCCAAACTCCCACCAACATCAACAACAACACTATCGTCCCCATCACTGCTGCCACGAACAACAACACCACGACCACCACTACCTTAAACAACAACAACAACAACAACAACAGTGTTGTGAAAATCGAAAACGAGACCTACAACGAGGATCAGGACGATTTAAAGACGTCATCAACGACAGCAGCATCGCCTGGTGTTGTAGAAACAACAGGTGTGACGACACCCACTGCAGGTGTGACGACAGACAGTGGACAAAATTGTTCAACACAAAATTGTACGTCGCAAAGCAAATTAGAAGAACGATTAAGGCATCCACCAACACCGACACCACCAGAACACCAAAATCATCATCAGCATCAGCATCAACATTCAGCAGCAAACGTTGCAACAACATTTACAAGTTCTGGCGAAATATTAGAAGTAAGAGATTGGAGCCCTTCGGAGAAGTGTTTGTTTTGTGTAGACGGCAAACTGGATTCCCGCGATAGTGAAACGCCCTTTATGCAGGGGTCGGCATTGAGTCCACAAGCATCCGACAGTGAGACAAGTGATAATAGTCACAGTGATACAGAAACACCAACCAATATAGCCCATCATTTACCAACATTGGCATCAACGCTATCTCCTCAACAATTATTACAAAACAATAATCATCAAAATATGGCAACAATTGAAAGTGTACATTCAATGGCTGTATCCTTAGCTGCTGTTGCCGCCATGACAAATAATAATGCCTTGGGTGGTGTTGGAAATGTTGGAAGTGGTAATCCACCCATATCATTCTATCCTCCAGCATTATTATCACCATGGTATTTTAATAATATACGTAATTTTAATCACGAAGCTGTTACGGCAGCAGCGTTACAGCAACAACAACGGCGATTAGAAATTGATGTGCCATCATCAACATCACCAGATAAAACAACGGCCAGTCAACAGCAACCTCAACAATCTAGTAATAATAGCTCAAATAGTAATCATAATAGTAATACGGCGGGAGCATCAGCGGAACAGCCATTAGATTTAAGTTCAAAAGGTGGTGGAGGCTCGTCCTCATCATCGACAACGTCTACGGCTACAACGGGTAACTTAAATAATCATACGACACAACATCTTCTACATGGTACGATAAACGTACCTGGTGCGGGTACACTGGATCCCAGTAAATTAGCGGCGCATCGAATGCCTGGTCAAACTACGATTGATAATAAACATATATTCAAAGCAAAACCTCGGATGTCAACGGTGACTGGCCGGCGGACATACACTGAAGATGAACTACAAGCCGCCTTACGTGACATACAATCTGGAAAATTGGGAACACGTCGTGCCGCAGTTATATACGGTATACCACGCTCCACATTACGTAATAAAGTCTATAAATTAGCAATGGAACGGGAACGTGAAAGTCATTTACTATCCGCCGCTCCAGTAAAATTAGAAGATGATGAAACAAATGTAACGACTGAAGAAAAAGAATTGTCAGGTGATGAGGAAGAGAAGGAAGTTGAAAAAGTATTACAAAAACCTTTATTATCAATGGATGATATTTTACGGTTTTCTACATTAGAATCACCAATTACAGAAAATTTAAAACATTTACTGCAAAAAGGTGTTTGTAAAGATACGCAAGAAAGTTTAGAAGCTAATAATTTTGCCCCTTATATACAATCGTTGTTGTTACGGGCGTCCGGTGGTTTGATTTCGGGACATAAAACTGATCAATTAATGAGTGCAATTAAGTTAACTGAAACGGTACAAAAGTTGTTAGCCGAATCAGAACAATCTGATCAACATTCAGATATTGTGAACAATGGTTGTGGTACCACTGAACGTAGTTTATCGCGACAAAGTTCTACAAATTCTGTTATAATTCGTAACGACAAAATACCTCCAATGAAATCAGGCACACCAGAAGTAATTGATACAGAAACAAATGATTCACAACAGCAGACCAGTGACTCACCATCAAATGTGATACTCAAAATTCCGTCCTTCAAACCTACAACCAGTAAAAATGGTGGTGATATATTTCGACAAAGTCCAAATGTATTAGATCCACAAACACCGTTAAATATTACATCCCCACACCATGGAAGTGGGAGTATTGGCGGTGGCGAATCAAATTCACCACCAGCTGCTATACTTGGTAAAGGTATAATGTCATTGAAGGACGTCATTGCCAAGAGTATCAGTCAAAAGTTTCAACAAAACGATCAAATGAGTTTGAAAATGGCAGCAGCTGTGGCTACTTCCCCAGTTATAGATATGGATTTTAATTCAATCAAACGTGGTCGATATACACCTCCTCCGTCAATGGGTGGTGGGATATCGGTTATTAAAAATCATCAAGATATGCATGCAAATCGACAATTTCCACAACCACCAAAACCTCAAAATAATAATTCATCAGCAAATTCTCAGCAACAATCCCAGCAAATGGGAGGAGGAAAAGGCACACGACCGAAACGTGGAAAATATCGTAATTATGATCGTGATAGTTTAGTGGAAGCAGTGCGCGCAGTGCAACGTGGTGAAATGTCTGTGCATAGAGCAGGAAGCTATTACGGTGTGCCACATTCTACGCTAGAATATAAAGTAAAAGAAAGGCATTTAATGCGACCTAGAAAACGTGATCCCAAACCTCAACCTACTGATGGTGATATTAAAACACAAACAGTACCAAGTAAACCTCAAGAACAAATACGTAATATAGCAGATAAAAATAAAACAAATATTAAACCACCTACCCAAAAATTTTCACCCACATCACCGAATGGTTTAAAAATGCCGTTGTTTGATCCAAGTATGACACCAATTGGATACAACCATCCTCCATTCCCATTTTGGCCACATCCATCATTCCATCCAATGCAAATGCCATCTACCTCTGGATTCCCGCCTCATCCAGATTTATTTGCCACGCAAATGATGCAAAGGATACAGGAACAAAATGTTGTATCATCACCACCACATTCTAGTACCTCTTCCGGAGTACCCACTGCTGCACAACTAGCAGCGGCGGCAAACTCGGCAAGTACACGAGAAATCGCCGAATCACTGTATGATGGCACTGGTGCAAATGGTACTTTTTTAGATGGTATTATAAGGTCGAGCCTTGAGATGGGTATACCTGGTTCCAGTAACAACAAACATGGCGAAGATAAATCATTAACACCAGAAAATATGTCGAATAAGGCGTTGTTGGATCAATTATGTAGGAATAGTCGTCTAACACCGTTACCCAAGCCGAATTTATTAGATCCACAAAGTTCTGGTGATGAAAGTAGTTCATACAATTCAAAACGTACACAAAGTCCAATAAACTTTTCACGTGATTACACTGATAATAAATTAGATAGTACACCCGTAAACTTTTCAAGTGGGGGTCGTAGTGGGGGTGGTCGGAATTCAACTGACATTGTTGAATTATCAAATGATTCAAATGAATCAACGACAGCGCCATTACCAATTAGTGACCGAAAACGTAAACATTCGATTGATAATCATTCAGAAGGTGAAGGTGAAAGATCATCAACGACAACCAGTCCTTCACCCACATCGAGAATTTATGTGAAACCACAATTTCAAGAAATAACAAAACCAGAAAATTTAAAACCTGAAGTATTAGTACGATTTAATCGATTACATGATACTGTCGGCAGTAGTTTATCCGATTTAAGTGAACAATCGCATACAATGTTATCGGATCGAAACGGTATAAAAGAAACAGTTGCAGTTGTAGATGAAAGTGCCTCAATTGTGAAACCGGAAGCGGGGGGCCAAGACTGA
- Protein Sequence
- MAECSYSRCVQERRNIRRELQKWTKNMVYVVGLERVAEELMGRRKWKLYQESLTKSSSIASLLANNINNQQLIQEHLATSTITPNNNSTITTTATPFSSSITNNTTVGTTSIITTTTPQTPTNINNNTIVPITAATNNNTTTTTTLNNNNNNNNSVVKIENETYNEDQDDLKTSSTTAASPGVVETTGVTTPTAGVTTDSGQNCSTQNCTSQSKLEERLRHPPTPTPPEHQNHHQHQHQHSAANVATTFTSSGEILEVRDWSPSEKCLFCVDGKLDSRDSETPFMQGSALSPQASDSETSDNSHSDTETPTNIAHHLPTLASTLSPQQLLQNNNHQNMATIESVHSMAVSLAAVAAMTNNNALGGVGNVGSGNPPISFYPPALLSPWYFNNIRNFNHEAVTAAALQQQQRRLEIDVPSSTSPDKTTASQQQPQQSSNNSSNSNHNSNTAGASAEQPLDLSSKGGGGSSSSSTTSTATTGNLNNHTTQHLLHGTINVPGAGTLDPSKLAAHRMPGQTTIDNKHIFKAKPRMSTVTGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERESHLLSAAPVKLEDDETNVTTEEKELSGDEEEKEVEKVLQKPLLSMDDILRFSTLESPITENLKHLLQKGVCKDTQESLEANNFAPYIQSLLLRASGGLISGHKTDQLMSAIKLTETVQKLLAESEQSDQHSDIVNNGCGTTERSLSRQSSTNSVIIRNDKIPPMKSGTPEVIDTETNDSQQQTSDSPSNVILKIPSFKPTTSKNGGDIFRQSPNVLDPQTPLNITSPHHGSGSIGGGESNSPPAAILGKGIMSLKDVIAKSISQKFQQNDQMSLKMAAAVATSPVIDMDFNSIKRGRYTPPPSMGGGISVIKNHQDMHANRQFPQPPKPQNNNSSANSQQQSQQMGGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPQPTDGDIKTQTVPSKPQEQIRNIADKNKTNIKPPTQKFSPTSPNGLKMPLFDPSMTPIGYNHPPFPFWPHPSFHPMQMPSTSGFPPHPDLFATQMMQRIQEQNVVSSPPHSSTSSGVPTAAQLAAAANSASTREIAESLYDGTGANGTFLDGIIRSSLEMGIPGSSNNKHGEDKSLTPENMSNKALLDQLCRNSRLTPLPKPNLLDPQSSGDESSSYNSKRTQSPINFSRDYTDNKLDSTPVNFSSGGRSGGGRNSTDIVELSNDSNESTTAPLPISDRKRKHSIDNHSEGEGERSSTTTSPSPTSRIYVKPQFQEITKPENLKPEVLVRFNRLHDTVGSSLSDLSEQSHTMLSDRNGIKETVAVVDESASIVKPEAGGQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -