Ccar008676.1
Basic Information
- Insect
- Chrysoperla carnea
- Gene Symbol
- kn
- Assembly
- GCA_905475395.1
- Location
- FR997757.1:10096533-10109497[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-103 2.8e-99 333.4 0.0 208 359 2 164 1 165 0.99 2 2 8.7e-06 0.1 11.3 20.3 431 572 163 339 163 347 0.64
Sequence Information
- Coding Sequence
- ATGTTGCAGGTAGTAATTGCTACACAAGTTGCAGTTGATGGACCGTTATTAGCAATATCTGATAATATGTTCGTCCATAATAATTCAAAACATGGAAGAAGAGCGAAAAGGCTGGATCCTGCGGAAGCTTGGTTTACAGGTTTATACCCACCACTACCAGTTGCTACACCCTGTATAAAAGCTATAAGTCCTAGTGAAGGTTGGACTTCTGGTGGATCGACAGTTATTATCGTTGGTGATAATTTCTTTGATGGTTTACAAGTAGTTTTTGGTACAATGCTTGTATGGAGTGAGTTAATCACACCACATGCAATTCGAGTACAAACACCACCCAGGCATATTCCGGGCGTTGTTGAAGTAACGCTTTCATATAAATCCAAACAGTTTTGTAAAGGTGCCCCAGGCCGTTTTGTATATGTTTCTTTAAATGAACCAACGATAGATTATGGATTCCAGAGGTTACAGAAATTAATACCTAGGCATCCAGGCCAGTTAGCGGTCAGCGTACAAGACAACGGAAACGGTCAGTGGACTGAAGAGGAGTATGGCCGTGGCCAAAGCAGTAGTGTATCACCGCGCGGTGGTGGATATTGTTCGAGCGCCTCAACACCACACTCATCAAACGGTGGTGGATCGTATGGCACAAGCACTGGAGCATCTAACAACATGAATGGTTATAATGGTTCAACACCAACATCCGGTTCACAACTTTCAAATATGATGTTACCAGGATCTCCCGCTGGCGGTATTTTCAACTCATCATCAATATCCCCTGATGTTACGACTAATCGCTATCAACAACTTGAACAAAACCATCATAACAACAACAATAATAACAATACAAATAACAATAATTGCCAACAACAAGACCAACATTTTGAACATAAATACAGTGGCGTACGAGAATGTAATAAACAAGATAATAGTAATAAAGCAATCGAGAAAAGTGCTTTCGCTCCTGTTTTACGAGCACACTCACCATCTCAAACTACATCATCAACATCACCTACCACCGTACCAACCAACACGCATTTACATCATGGTACTGTTGGACAAATACCATCATCCTATGTCCACCATCACCACCACCAACAACAACCAGAACAACATCAGCATCACTATCAAACATTATCCACAACTTCGGGCTGGCAACATTTAGTTGTACAATGTTAG
- Protein Sequence
- MLQVVIATQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDPAEAWFTGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGQLAVSVQDNGNGQWTEEEYGRGQSSSVSPRGGGYCSSASTPHSSNGGGSYGTSTGASNNMNGYNGSTPTSGSQLSNMMLPGSPAGGIFNSSSISPDVTTNRYQQLEQNHHNNNNNNNTNNNNCQQQDQHFEHKYSGVRECNKQDNSNKAIEKSAFAPVLRAHSPSQTTSSTSPTTVPTNTHLHHGTVGQIPSSYVHHHHHQQQPEQHQHHYQTLSTTSGWQHLVVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -