Ccar006886.1
Basic Information
- Insect
- Chrysoperla carnea
- Gene Symbol
- retn
- Assembly
- GCA_905475395.1
- Location
- FR997757.1:67966248-67993159[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-19 1.1e-15 58.1 0.0 16 89 525 596 521 596 0.95 2 2 1.6 4.8e+03 -1.6 0.9 81 89 635 643 633 643 0.94
Sequence Information
- Coding Sequence
- ATGACTCGTGAACAATCACTTAAACGTGAGTTAAGCCAATATGAAGGCTTAAAACAAATGTACTTTTTACAAATTCAACGTATTCATGGTTATACCAAATTATTGAATGACCAATCTGTTTTAAAAACTTTTTTGGCTGAATATACCACTGTCAACGAGATAATGTCTGAAATTAAGGATGTTGTTATGAAAATAAATGACATTAATTTACAATTAGATGAAGCATATGAAGTAAATTATCAAACTATTAGTAGCAGCCAACAATTGGTTGGTCACATAAACGCCGCTTATAATGAAGTCAAGCCTCAAACCTCTGTACCTACAACATCTTCTAATATGACACCTGTTCTACCTAAAATTGTATTACCAACATTTGATGGTAGTAAAAAACATTGGCCTGTTTTTTGGGAAACCTTTCAAAGTTTGATTGACAATAATAGATCTTTGGATGATAATTCGAAAGTAAACTATCTACTTTCAGCATTGCGGGGACATGCATTAGAAATGTGTACGGGCATTATCCCCACCGCTGCCAATTATCAAATAATTAAAGATTTATTAAAGGAACGCTTTGAAGACAAACGACTTTTAATGGACACTTATCTATCACAGTTATTAAATTTTAAACAATCTAAATTGGAATCCGCTGCGCATTTAAATTCATTTTTAGAAGTTTTCGATACTTCGGTTACTGCTTTGAAGAATTTAAAAATGGATGATTTGCTTGATTATGTTTTAGTTTTTATCGCACTTTCCAAATTAGATTGTGAAACTAGAAAGTTTTTTGAAATGTCTTTAAAGGGAAACACACTTCCAACTTATTCTGGTTTCATCTCTTTCATTAAAGGCCATATTAGAACGCTATGCAATTCTTCCTCGTCTGATGCCTATAAAGTTAAAACTCAAACTCCAAGTGCAAAAACAATTTCAATTAATCCTCAAAAATCAGCTAAAAGCACACACAGCTTTTCATTCAATTCGAAAACTAGTGAAGATAATTCATCTATTGATGTATTAAATGTTGACGAAAAATCAAAAACAAATACCAATGTTACTGCTTGCTCTGCAGTTCGAAATATAGTAGTAACTAAAACTGTATTATTATCTACCGCAATAGTGAATGTACGAGATAAATTTGGAAATATTCATAAATTGAGGTTTTTATTGGATTCTGCATCTCAAAGTAATTTCATTACCTCCGAATGTTGTCAAGTTCTAAATTTACCAATAGTAAAAGTTTTTACATCCGTTATAGGTATTGGATCGCATACGAAATCAGTTAGAGGTCAAACCAATATATTGGTATCGTCTAGATTTGACCCTACTAAATGTTATCCATTAGAATGTTTAGTTATAGATAAAATCACCAACCAGCTTCCTTCAACAAACATCGACATTACGTCCTTTGAACATTTGAAGGATTTATGTTTGGCTGATGAGACTTTCCATGTTCCTTCAACTATACATGGAATAATGGGTGCATCCATGTTTGCACAATTATTAGGAACAGCTAAAGTTATTGGCCCTTCGCTCAGTCCTATAGCTGTTCATACCCCCTTGGGATACGTGGTAATGGGTACACCAATAAATCGTTTACCAATAATGGCAAAATCAGTATTAGACTTATATGAATTATATAATTTAGTAATTGCACGTGGTGGACTTGTGGATGTTATTAATAAGAAATTATGGCAAGAAATTATCAAAGGTTTACATTTACCATCGTCAATAACATCAGCTGCTTTTACACTTCGCACACAATATATGAAATACTTGTTCCCATATGAATATGAAAAACGTCGTTTAAGCACACCAGCCGAATTACAAGCTGCAATCGATGGAAACCGACATGGCAGACGTAGCAGTTATGGTTCATACAATGAAATGGTTCATCCACCTAGATATATGAAATATTTGTACCCATATGAATGTGAAAAACGTCGTTTAAGCACACCAGCCGAATTACAAGCTGCAATAGATGGAAACCGACGTGAAGGCAGACGTAGCAGTTATGGTACATACAATGAAATGGTGCAACGTAGTCCAATACCTACATCACAGATGTCACCGTTATCGTTAGTTACACAACAGCAAACAATGATGTCACGTATGACGGGTGGTTTACCAAATGGTGCACATCATCCTAGTCATCCACCACCATTAGGTCAACCACCTCTCGGTGGTCCCATTCCTGGTCTAGCACCATCCGAATTCGAAGCACGTATGGTTGAATATGTGAAATTATTGAATAAGGAATTACGAAATACAGCATCACCGACCGCTGCCCGACATGGATCATCGTCCCCACCAAATAATACAACATCACCAATAAATCCATTAGAAATGTCACGATTAACATTATGGAATTTATATAATAATAATCCAACAGCACCTCCACCAATATTAAACCCACCACCGGTATTAGAACCACAACGGGAAGCATTAAATTTAGCTGATGTAAATAATAGTCCGCAAAATAATTCATTATCCACACCGATAACAGCAATGAAACGTGAACCGGAGCATGAAGAACAACCACCAGCTAAACGACATTTACAAGATGACGATATGAGTCCACCAAATTCACCAGCACCATCAGAACTATCACCGTCACAGCCACAGACACCCACAACACATATTGGTGGGCTTAGTACAAATATTAAAATCACTAACAGAGGTGATGCACGAAACGGTGATAACTCATTAGTTGTAAGTATGGAATTAAATGGTGTTATGTATCAAGGTGTATTATTTGCTCAACAATTGCAAAGTGGAAATCGTAATGCCAGGATCTCAACGTGA
- Protein Sequence
- MTREQSLKRELSQYEGLKQMYFLQIQRIHGYTKLLNDQSVLKTFLAEYTTVNEIMSEIKDVVMKINDINLQLDEAYEVNYQTISSSQQLVGHINAAYNEVKPQTSVPTTSSNMTPVLPKIVLPTFDGSKKHWPVFWETFQSLIDNNRSLDDNSKVNYLLSALRGHALEMCTGIIPTAANYQIIKDLLKERFEDKRLLMDTYLSQLLNFKQSKLESAAHLNSFLEVFDTSVTALKNLKMDDLLDYVLVFIALSKLDCETRKFFEMSLKGNTLPTYSGFISFIKGHIRTLCNSSSSDAYKVKTQTPSAKTISINPQKSAKSTHSFSFNSKTSEDNSSIDVLNVDEKSKTNTNVTACSAVRNIVVTKTVLLSTAIVNVRDKFGNIHKLRFLLDSASQSNFITSECCQVLNLPIVKVFTSVIGIGSHTKSVRGQTNILVSSRFDPTKCYPLECLVIDKITNQLPSTNIDITSFEHLKDLCLADETFHVPSTIHGIMGASMFAQLLGTAKVIGPSLSPIAVHTPLGYVVMGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLFPYEYEKRRLSTPAELQAAIDGNRHGRRSSYGSYNEMVHPPRYMKYLYPYECEKRRLSTPAELQAAIDGNRREGRRSSYGTYNEMVQRSPIPTSQMSPLSLVTQQQTMMSRMTGGLPNGAHHPSHPPPLGQPPLGGPIPGLAPSEFEARMVEYVKLLNKELRNTASPTAARHGSSSPPNNTTSPINPLEMSRLTLWNLYNNNPTAPPPILNPPPVLEPQREALNLADVNNSPQNNSLSTPITAMKREPEHEEQPPAKRHLQDDDMSPPNSPAPSELSPSQPQTPTTHIGGLSTNIKITNRGDARNGDNSLVVSMELNGVMYQGVLFAQQLQSGNRNARIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -