Cruf003707.1
Basic Information
- Insect
- Chrysomya rufifacies
- Gene Symbol
- pnr
- Assembly
- GCA_014858695.1
- Location
- JACGTJ010002227.1:40-13791[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.78 2.8e+03 -2.0 0.1 15 24 332 340 331 341 0.80 2 3 0.83 2.9e+03 -2.1 0.1 8 24 465 483 463 484 0.59 3 3 1.3e-17 4.4e-14 51.8 1.7 1 35 536 569 536 570 0.98
Sequence Information
- Coding Sequence
- ATGTGTAGTGTTCCACCAAAGTTTTTTCAAGTTTGTCGCCTTTGTCTTATGTTAATAGATGATATATCAGAACATAAAATATATGGTACAACTAGTGTATCAAATGATTTTAATAATGAATGTAAATGCAAAATTAATTTAAACAATAGCAAGTACTGCAACACAGTTTCAAAATGTTGCAGTTGTGATAATGATTCAATACCGAGTATGCAAAATTCTTCGATACCGCGTGTGCCTTCAAACACAAATCCGTTTCAATCTAATTTTAACAAAATCGAGGAAGATAATCCAAATAAAAATATTGAACCAGATATTTCAAAAGATGAAAGTTTTAGGTCAATATATAATACATCATTTGACAAAACCGACGAATTTATGGAGTCAATGAAATCACATATATGTTCTCATAAAGGAAACACTGATTTCTCCAAACAATTGTGTTGTGATGATTCATCAGATAACATAATCATACAAATATTGAAGTGCCTTTCTTTAGAAGTATTGCCAACAGATGGCTTGCCAGCTTTAGTTTGTTGTAATTGTAAGTCAAACTTACAAACATTTTGGAATTTTAGAAAAATGGCTCATAAAGCAAATACCGCGCTTAGAGATTTCTTAAAAATTTGCAACTCATCAGAAAAGAATATGGCCGATATTAATATATATTTCAATAAACTTCTTTCTTCGGCGACATACAAGAAGTCTTCATCGGAAGAAATGGCAGCTAAGGCGCTTACGGAATTGTGTACTTTCTCAAAAGAAGATAAATCGTCAAAAACTTTGAAATCAATACCCAAACCACAAAAATGCTCTGAAAAACTTTTAAAAGAAGAGTGCAGTTTTACACTTACTGAGATCCACAGTTCTCAGTCTGATAGCGCAAACGTGGATAATGAATATTTTGATAAAAATAAAAATTTTCAACAGAAATTGGAAACCGCTGCTGTTTTAATGGATATAAGTAAAAAAGTGATAATATCACCTCCTTGCTCGAATCCTCAATCACCGAGACTATGTTCATCTATAGATTCTAGTATTTTAAATTCTGTGATAAAAAATAAACGTCCACTTAATGATAATTCTGATTCTGAAATGGATTTATCAAAAAAAAATTCCAGATGTGATTTACAAAACCTCATAGATTTTTATTCTACTCAAGACAAATCAGTATCACCTCCTCAAATAAACTCAAACTCACATGTTTTTAAGGAACAAAATTTAATTCGAAAAGTCGACAGAAATAACTTCAATACTGAAACAAATTCCAACACAATACAAACAAATACTCAAACTTTTCCAAAAATAAATTTGTTAAGTATAGAAACAGAAGTTCGACATGAACCTAAAACTCCTGATAGTGTAACTTCGGAAGAACATGGAACTGATGCAGCAACAACACAACTATGGCAAGCTTTAGCACGCTCAGCAGCGAACAAAACTGAATGCAATGAAGCCTCTCATTTTTTACACATACTTAATCGTTCATTTGGTTATCCAAATACATCTCCATCGCCTTCCCTAGATGAAAAAGTACCTGAGGAACCAGTAGCCCTTTTAAAACCAAAAATATGTACTTTTCAAAGTGGATCTCAAAAGGATATGTCGTGTTCGAATTGTGGAACTCTAACAACGACAATTTGGAGAAGAAGCATTCATGGAGAAATTGTTTGCAATGCATGTGGGTTGTACTTTAAACTTCATGGAGTAAATAGACCGCATTCGATGAGAAGAGATACAATTCACACCCGACGCCGGCGTCCAAGGGACTCTGAAAAGTTGGAGAAGAAAAATGAGTTCTAA
- Protein Sequence
- MCSVPPKFFQVCRLCLMLIDDISEHKIYGTTSVSNDFNNECKCKINLNNSKYCNTVSKCCSCDNDSIPSMQNSSIPRVPSNTNPFQSNFNKIEEDNPNKNIEPDISKDESFRSIYNTSFDKTDEFMESMKSHICSHKGNTDFSKQLCCDDSSDNIIIQILKCLSLEVLPTDGLPALVCCNCKSNLQTFWNFRKMAHKANTALRDFLKICNSSEKNMADINIYFNKLLSSATYKKSSSEEMAAKALTELCTFSKEDKSSKTLKSIPKPQKCSEKLLKEECSFTLTEIHSSQSDSANVDNEYFDKNKNFQQKLETAAVLMDISKKVIISPPCSNPQSPRLCSSIDSSILNSVIKNKRPLNDNSDSEMDLSKKNSRCDLQNLIDFYSTQDKSVSPPQINSNSHVFKEQNLIRKVDRNNFNTETNSNTIQTNTQTFPKINLLSIETEVRHEPKTPDSVTSEEHGTDAATTQLWQALARSAANKTECNEASHFLHILNRSFGYPNTSPSPSLDEKVPEEPVALLKPKICTFQSGSQKDMSCSNCGTLTTTIWRRSIHGEIVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPRDSEKLEKKNEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -