Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: grau
Assembly: GCA_014858695.1
Location: JACGTJ010044026.1:6695-8977[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.061 3.4 8.3 0.2 6 23 264 281 264 281 0.99

2 9 3.4e-05 0.0019 18.6 2.3 1 23 287 310 287 310 0.95

3 9 0.014 0.74 10.4 2.0 1 20 318 337 318 340 0.92

4 9 0.25 14 6.4 0.4 1 19 348 368 348 373 0.90

5 9 0.0083 0.46 11.0 0.4 3 23 380 400 379 400 0.97

6 9 0.077 4.3 8.0 0.1 2 23 409 432 408 432 0.88

7 9 0.00098 0.054 14.0 1.1 1 23 439 462 439 462 0.90

8 9 3.6e-07 2e-05 24.8 3.2 1 23 467 489 467 489 0.97

9 9 0.00047 0.026 15.0 3.8 1 23 495 518 495 518 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.061	3.4	8.3	0.2	6	23	264	281	264	281	0.99
2	9	3.4e-05	0.0019	18.6	2.3	1	23	287	310	287	310	0.95
3	9	0.014	0.74	10.4	2.0	1	20	318	337	318	340	0.92
4	9	0.25	14	6.4	0.4	1	19	348	368	348	373	0.90
5	9	0.0083	0.46	11.0	0.4	3	23	380	400	379	400	0.97
6	9	0.077	4.3	8.0	0.1	2	23	409	432	408	432	0.88
7	9	0.00098	0.054	14.0	1.1	1	23	439	462	439	462	0.90
8	9	3.6e-07	2e-05	24.8	3.2	1	23	467	489	467	489	0.97
9	9	0.00047	0.026	15.0	3.8	1	23	495	518	495	518	0.97

Sequence Information

Coding Sequence: ATGCTATGCTGTATTTGTCTTTTGGAAGTGCAAAATGGACGAAGTATTAGAGATAATGTGGGTAAAGAACTAAATATAGGAGAAATTATTTCCAAACACTTTTGGTTTAAGCACGAGGAAATACAAACTTCATATATTTGCCATACATGTTGGTCTAAAATTAATGATTTCCACGAATTCTATGAGGCAGTTGAAAAAACTCACCGCGAATTTCAACATGTACAGCAAGATTTAGATGCTATGAAAAAGGAAGAAGATCAATACATAAATCCTCCAAGTATTAAACAAGAAGATGATGATTTAGAGCACGGTTATTTAAATATAGAGAAAAATTTGCAATTAGAAATTGAAATTGATTATGATCAGGATAAAACTTCTAAAAATCCTTTAGAAGAATGTATGGAGGAAAATGAAAGTAGTGATACTGAAGAAGAATATGATAATGAAGATGCATATAACAGCTCAACTTCGGAAGAAGACACTAAAACTACTATCAAACAAGAAGTTAGAGAAAAACTTACGAAAAGTTCTAAAGCATCTCCAAAAACTTCAAATAAAACAAAAAAATGTAGAAGAAAAAAGACGGAAAAAGAAAAAACCGATAATAATACAGTGCCCAAAAGAAAGAAAGCAATTTTTAATCGTTTAGATCCGGTGCATACAGAAGAAATGATACTTAAACATATTCCAATGGGCTGTAATTTATGTGTTTTTGTGGGTAAAACTTTTAGTGATATTGTAACACATTTTAAAGCGGAACATCCAGATGTTCGACCGTATATAACGTGTTGTGATAAGGTTTTCACGAAACGCTTTTATGTTGCACAACATGCTATGACTCATGAAAATCCTAATTGTTTTAGATGCACTCTATGCAATAAATCGTTTACAACAACAGGAGGTTTACAAAAGCACAACTTGAAATACCATGCTCCCGATGAAGAGCTTACTTTTGCCTGTGATTTATGTCCACAAAAATTTGCACGACAACATTTACTGCATTTGCACAAACCATCACATATACCACGAGAAGAATGGAATTTCTTTTGTACAAAATGTCCCACCGAAAAAGCATTTGCTAGCGCTTATTTGTTAAATATACACGATAATAAACTACACAAAAAAGAGAAAAATATTTGCAATGTTTGCGCTAAAGAAATCAAAGATAAAAAATCTTTTGAAAAACATGTACGAGAACATTATAATGGCAGTGGTCCTAGAATAAAATGTCCCATGCCAAATTGTGATAGTTGGCTAAAAGATGAAGATAATTTAAAAGTTCATTTACGACGACACAATACAGATAATGAATCCTATAAATGTCCTTTATGTGATAAAATATGTCCAAATCGTAGAGCTTTATCAAGTCATAAAGTTTATGTACATTCTAAAGCAGAATTTAAATGTGAACACTGTGATAAAACATTTAAGAGAGCTATTAATTTAAGGGAACATATGACTCAACATACCGGTGAAGTTTTGTATAATTGTCCATTTTGTACGAGAACCTTTAATTCGAATGCCAATATGCATGCTCATAAGAAGAAACAACATCCTGTTGAATGGGAAGCTTTAAGAAGACAAAAAATGATTGGTAATTCGGCTGATACAAATCAAATGATAGATATGAGTGGCATATTTTAA
Protein Sequence: MLCCICLLEVQNGRSIRDNVGKELNIGEIISKHFWFKHEEIQTSYICHTCWSKINDFHEFYEAVEKTHREFQHVQQDLDAMKKEEDQYINPPSIKQEDDDLEHGYLNIEKNLQLEIEIDYDQDKTSKNPLEECMEENESSDTEEEYDNEDAYNSSTSEEDTKTTIKQEVREKLTKSSKASPKTSNKTKKCRRKKTEKEKTDNNTVPKRKKAIFNRLDPVHTEEMILKHIPMGCNLCVFVGKTFSDIVTHFKAEHPDVRPYITCCDKVFTKRFYVAQHAMTHENPNCFRCTLCNKSFTTTGGLQKHNLKYHAPDEELTFACDLCPQKFARQHLLHLHKPSHIPREEWNFFCTKCPTEKAFASAYLLNIHDNKLHKKEKNICNVCAKEIKDKKSFEKHVREHYNGSGPRIKCPMPNCDSWLKDEDNLKVHLRRHNTDNESYKCPLCDKICPNRRALSSHKVYVHSKAEFKCEHCDKTFKRAINLREHMTQHTGEVLYNCPFCTRTFNSNANMHAHKKKQHPVEWEALRRQKMIGNSADTNQMIDMSGIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -