Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: -
Assembly: GCA_014858695.1
Location: JACGTJ010000937.1:126-13099[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.099 5.5 7.7 0.7 1 23 1759 1782 1759 1782 0.91

2 12 1.9 1e+02 3.6 1.0 1 23 1944 1966 1944 1966 0.93

3 12 0.00072 0.039 14.4 2.8 2 23 1969 1990 1969 1990 0.97

4 12 0.00012 0.0067 16.8 0.2 3 23 1998 2018 1996 2018 0.98

5 12 7e-06 0.00039 20.7 5.8 2 23 2025 2046 2024 2046 0.97

6 12 8 4.4e+02 1.7 0.1 5 23 2059 2077 2058 2077 0.96

7 12 0.25 14 6.4 0.1 2 23 2116 2136 2115 2136 0.92

8 12 7.2e-05 0.004 17.5 0.6 1 19 2142 2160 2142 2164 0.95

9 12 4.8e-06 0.00026 21.2 1.8 1 23 2172 2194 2172 2194 0.99

10 12 0.00017 0.0092 16.4 6.5 1 23 2200 2222 2200 2223 0.96

11 12 0.001 0.056 13.9 6.4 1 23 2228 2250 2228 2250 0.99

12 12 0.0026 0.14 12.6 6.0 1 23 2256 2278 2256 2279 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.099	5.5	7.7	0.7	1	23	1759	1782	1759	1782	0.91
2	12	1.9	1e+02	3.6	1.0	1	23	1944	1966	1944	1966	0.93
3	12	0.00072	0.039	14.4	2.8	2	23	1969	1990	1969	1990	0.97
4	12	0.00012	0.0067	16.8	0.2	3	23	1998	2018	1996	2018	0.98
5	12	7e-06	0.00039	20.7	5.8	2	23	2025	2046	2024	2046	0.97
6	12	8	4.4e+02	1.7	0.1	5	23	2059	2077	2058	2077	0.96
7	12	0.25	14	6.4	0.1	2	23	2116	2136	2115	2136	0.92
8	12	7.2e-05	0.004	17.5	0.6	1	19	2142	2160	2142	2164	0.95
9	12	4.8e-06	0.00026	21.2	1.8	1	23	2172	2194	2172	2194	0.99
10	12	0.00017	0.0092	16.4	6.5	1	23	2200	2222	2200	2223	0.96
11	12	0.001	0.056	13.9	6.4	1	23	2228	2250	2228	2250	0.99
12	12	0.0026	0.14	12.6	6.0	1	23	2256	2278	2256	2279	0.96

Sequence Information

Coding Sequence: ATGACTGAAAACGTTCAATGTCCAGTATGTACTCTATACCTGCATGCAGGTATGAACCTTTCGGATCACTTGGAAACCCATCCAAAGGAACAAGTGATACGAGCTTTAGTACAAATGACCATATCTGGCAATGGAGTTGGAGGTGCTTTAGCCTCTGTCTTAGCTGGAGATAATAGTAAAACAGATAGTGGTAGTAAAAAATCTAACAATAATGATTTGGATGATAAACCTTTGCCAAATGATAAAGATGAAAACGAGCTTAATATTGCTAGTGCTGGTAATAGTTGTAGTGCCAGTTCAAGTAATTCTATCAGCAATGGTTCAGATGCGAATCAATGCAGTAACAGTAGTAGTCAAAATTCAAATAATGTTTTAAATTTTTCCGTTACCAAAAACGAAAGAAATAATGAAGCAGAAAAAGATAAATGTACAGCATCTTCGTCTTCAACAACTACTATGACGGCAAAGGCAGTAATTAAAACAGAAACAACCAAAACAGTGGTAATGACAAAAGAAAATGTAATGACAAGAAATGCTAATGAAAATGTAAATTCATTCAATAATCAACAAAATAATAACCAGACAAATTCGACCTCTACGACCAACTCAAGTCATTCATATCATTCAAATACGGTTGAATTGACAAATGCCAGTCAAATTCATAATAGTAATAGTTTTAATATGTTTAGTGGTAATTCACGTTATGATCATCAACAGCAACAACAACAACAGCAGCAGCGTAATCAACAAACGGTACCGCCTCACATGCCACCACCGCCAGCTCCAGTTTCTGTTTCATCACAGGCTCAACATGCTGGTCAAAATCATGAATTAGGACGTGGCAGTATAATGCCAGCATCAACTTCAAGTGGAACATTTCATTCGTTGCAACCACAACAATTACCACCACCTCCCCCACCGCATCATACATCGTCTCATTTAGGAAATACGTCATCCAGTAGCCATCGTCCGGCTCATATGTTTGCAACAGGTCAACCTCAAGCGACGCCATCAAATTCGCATCATCACCAGCAACAAAGTTTAAAGGTTATATATACACCAAATTTGCCACCACCACCGCCGTTACAGCTCTTCACCTATCAACCACAAACACATTTGCAGCATCATCAAAAACCCCCACCGGCCTATGGCACTGCAATTAGTCAAATACGATCTCAACATAACCAAAATAAGCATCAAGTTACAGGGTCATTGGCAACAACGCAACACCAGAATCAAACACATACAATTTTGCAACAACAACATAATTTACAACAACAACAACAACAAACGCTGCACAATATGCGAATTCAAGTACCACCGCCACCACCACCAATGCCAATTCCAACAAAACATACATATTCTGCAAAGAGTAATAGTTTATCCACACAACAACATCCGACGGCAACAATAACACCGTCATCATCTAGACACAATAGTCATCAAAATCAACAAAATCAGCATATATCCAAAACCGATTTAAACCACCATCAGCATCAACAACAATCTCAAAATAATTTGGATAATACACAAAATACCAATTCCAGTCAAATCTTCAATTCACACGATATTTCAAATAAATCTATAAAAGGAGGAATTACGATATCAGCAATAGGTCCAAATCATAGTAGTAATAATAATAATGTTACATCATCATATCCACAAGTTTCGATTAGTCCATCGGTTGCTTCAGCATCAATGGCAGCGGTAGCAGCTTCAACCCTAAGTCGACATACAAATTCTCCATTTGCAGCTTTATTAGCTGCAGCTGCTGGTGCTCCATCTCCATCAAATACTGCATCATCTGTTTTGCGTTATGCAGAGTCTCCAGTAGCTCATTACTTAGAACGAGATAATGGTGACTTCATTGTACAAGAAACTCCCAAACATATTGTAGAATGTGTAGAAACGGACAATGGAGAGTTTTCCGTAATTGAACGTATTTATCAATCACCACCAAGTGTTTTACATATACACGACGATGATGAAGATGATGATGATGAGGAGGATAATGCAAATGATCATACCAAGCGTGGTGGTCAAGTAGATAAAGAACATCAGGAAATTGTTGAAAACAAATCTAAACAAAATGAAACACACAGTGATAAAGTCAAAGACCAAATGATAGGAGAAAAATTAAGACAAAAGAAAGATGATAAAATTTCCACAGAAGTAAATAAGAATAATAAGAAATCTAAGATTAATGATGACGATGAAACAAATGGAGATAACGATATTGTTGATTTTGTTAGCATTTCGAGTGATAGTGGTGATGAGGAGGAATTCATAGCGCAGGAGCAAAAACAGCTGAAAAGTACCACCGACAAAAATAAAAACAACCAATTATTAAATAACACCTCTACGTCAACGTTATCGTCAAATACTACAACGTCTTACACAACATCTGCAACAAGTAGTGTTAGTGATGAACAACCATCAACTTCTTCGTCCGCATCATCATCAACATCATCTTTAGCCGCCACAAATAACAATCAAACCCAACAAAATTCAAGTGGACCCTCAACCAGCAATACCACTAGTACTCGTAAGAAATCATCCAAAAACACTATCACCGTTTTAAGTGACGTTCAGTTAAATTTAAATGAATATTTGGATTTAGTGGGTAATATAATCGCTTCAAGTAAGGTAGCGGCAGCTCAGCGTAAAACATTTGCCTCCATAGCTCCCATACCTTTGGTGAAAATTGAAAAGGAAGAACCTATGGATGAATATACAACAGGAACTCCAACAAAAAGCAATTTTGAAACTCCATTACGACCACCAATAACACCTTTAAAGGCCAACAAACATGAGACTGATGAAATAACTGATCCCCCTAGCAGTAGTAATAACAATAGTAATATTAATAGAAAAACAATTAATAATCCTAATGTAATTTTAACAAATGATGTAGAACGCGATGACGATGATGAACAAGACGAGAAAAAACCTCAAGTCTTCGAGAATGAAACCACAACATCAAATGCATTTTCTAATAACACTTCTAGCCAAATGACTATAAATTCCAGTCATGTTACCAGTGTTATACGTATGGCCACAACTAGTCAACCACAACACCAAGTAAACCCTCAATCTCAAGCTCCGGGACAGCAGTTAAATTCTTCTTCGGAAGCTAATAAAAACCTTAATCAAGCTGAGGATTTATCACAAAATCAACGTAAAATTCAACCCATACAAACACCGTTGACTCGAAAAGGTCCGAAAAAACTAGTTATTAAACCGAAATCTTCAAAGACTGACAATATACCCAGCAACAACAGCACAACAACTAAACCAAATGAAAATCAAGTAAGAGATAACCAACAAGAATTGCCTTCAACTTCATCTAAGGCTAGACAAGATCTAACAAAACAATCATCCTTAAAAGAAGAAGATGTTATAGATATCAAGGTTAAAAATGAACCAATTACATCAATTGCATATGAAAATCAACAAGAACAGCATAATACTTCCAATGCCAATGCTTATAAACCACCACCAAACAGTTTTAGTATTTTGGAGCAACATTTGAATTCCAAAGAACCCATTCTCGAGTTTAAGGAGGAAAAACCTTGTATACAGGAAACTACAGTACCAACAACGCCTACAACAATCATAAAAGAAATGAAAGTGGAAAATAATGTTAACGATGATGCCCGAGTACTTTATGATTTTGCAAATTCGAAAAAATCACAAAATGAAATCACACCATCAACATCATCCGTAGTAACTAACACTTTTCCCTCATCCACTTCGTTGTTCTCCGGCAAACAAACTTCCGTAGTAAATCCAATAAATGTAGAGCAACACCACCAACAGCCACAACAATTAACTAAAACTGTAAGTCATCATATAAATGATGATAACACTTCATCTTCTTCAAATTATTCATCCCAATCGGCTATGGATGCTACCATGCCAACTGAAGATCATAATGAGCATTCGGCGCCAGCAAATGCTCAAATGCTTCAACAGCAAACAAATCATATGTATACAGATTTTCATTTTAATTATTTATATAATAATGGTGGAAATAATGTTACACCTGTTGTTGCGACAACAAACGATATTAAAAATCCCTCAGAATATTCAACATTTTATCAAAATCCCAACCAAACACTGCTATTAGAAGATTCATCGTCCAGTAAACATTATACTGACTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAATATTACACCTATCACTTCGAATCATTCAATTTCAAATATCAATAGTGCTGGTACAGCATTATCAGTCGATGGAAATAGTGCTACAGCTTTAGATGGTACTGAAGTTAGTAAATATTTAGACTTAGATTCATGTAAACGCGAACAAAATATTGAACTAGTAGTTGGTGACCGTGTTCCACCACCCTCTTCATCAACATCATGTTCATTTAATGGTGCAACAGACAATAGTATGGCTGGTATTTGTTCCACTGCCGTTGCCACTCTTAATATACGAACGGATGAGAAAATGCCAGCGAAAGGTGAAATATCCGAACAGGAAAGTAATTGCGATATTGATAATTCATGGAGTCAGCCGATGTATGGCGATATTTCGGCACGGTTCTTTAAAACAACATTTCCTGGCATTTTTCCACAAGACAATGGATGGAATAATGAAGAATATTTCACGGTGCAGGATTTGAGTGCCTCAACAACTGCACAAGCTACAAATAGTAATAGTAGTAGATTAAAAAGTTTTGAACCTTTAACAAGTAGCAGTAGTAACAACAATAACAATAGCAGCGGAATTCCAATATTTTCAAATTCCAATGATAATTGTAATATAGATGTAATGCCCTCGACATCAGCTAAAATCAGAAAACGGCGTAAACGTAGTTCTCAAGATGATAAAGTATCACAAGCAAATAATAAACGTATGCAACCAACATCTACTGTTACATCACAACAAATGATGATGCAACATCAAAATGAGTTAACAGGCATAGAATTCAATTTCCAACAATTGCCAACACATCAACAACAACTATTGCAAGAACCTAGTACTTCGTCTGCATTTTTGGCTGGACCATCAAATGCTAATAATACAGGATTTATGTTACAACAACAACAGCAACAGCAACAATTGCACCCGCTACAACAGCAACCTCAAACGCAGCAGCAAACACAACCGAAACAACGCACAAAAGTCTATGAATGTGGTCATTGCAACGCTAAATATTCAAAACTTAAAGATCGTAATGCTCATATGGTTGATGTTCATAATTATATAAGACAAAATCGTAGATTGATATGTCCCACAACTGGTCTTGCTACACCTCTCAACACTACCGATATGCAAGATGTTGCTGCTATGCCTACAACAAGTGCTGCCAGTGGTAGCATGTTATTGTCACGTCAACTGCAAAATACTGAATGTATGAGCGATAATAAACAGAGCATTGTAAAAATCGAAAATGATAACCTGCAACGTGATTTAAACGGTTTGGAACCAATTAATGCTAACTTAAGTGCTAAAACTGAATTTTTAGAAGATGACAAACATTTAGCTTTAGTACCAATAAATGGCGGCACCAATACAGAATGTGATACTAAACCGTCAACAAATAATTTGCCATTATCACTAACAACACCCACCAGTAAACTAACAACACTCTATCGTATGTTAGTAACCTTTAATATGACCACACTCAAACAGAACAATAATCTTTCGGAAATTGATGAAAATCTTATAAAATCATCGATATTCTTTTGCTATATATGTCGGCAAAATTTCAATTCTGTGAAATTATATGATGCTCATTTAACGGAACATCCAGCAGAATGTTTTACATGTGGTAAAAAATTCCAACGATGGAAGAATTTTTCGCTGCATTTAAAACGTCATTTGGGCTGGAAAGAATTTGGTTGTACGGTGTGCGAAAAGAAATTTGTAGTACGAAGTGCTTTGGTAGAACATATGCGTATGCATTCTGGATTATCACCATTGAAATGTAAAGTTTGTGGTAAACACTTTAAACGCTATTCAAACTTAACTCAACATCGTAAGCGTCACACTAAAAAGAATGTACGTAGGAAAGAGTATGTCTGTTATTGTGGTGAAGTTTTACCATCCAAGGCACGTTTCTTGTGGCATAAAGAAACTCATGACTCAAAACCGAAATGTTGTCCACATTGTTGTGATCGTTTCGTACATGTTAATTCTTTGCGTCGTCACATACGTCTCGCTCATTCAGATAAATTTGATTACACCGAACCGATGGAGTGTCCAATATGTAAACAAATCTTTGCTAAAGCCTCAATGAAAGCTCACGTGGCAACGCATTCCACAGAAACTCAATATGATTGTACCATTTGTAGTAAATCATTTTCGACCAAATGGAATTTAAAAATACACTCATGGGTTCATGCAAATCGTACCGCCAAACCGTTTAAATGTGAACACTGCCCCAAGGCATTTGTACGCGAAGTTGATTTTAAGAATCATATGAATTCACACAAACAAATCAAACCGTATACATGTGAAGTGTGTGGTTGTAAATTTATACGTAAATACAACTATATGCGTCATAGACGGGAGCATCATGGCAATAAAAAATATACCTGTGATCTGTGTAAAAAATCGTTCCATCGTCATTATTATCTTATAGAGCATAGACGTATACATACGGGCGAACGACCTTTTCAATGTACGATATGTGGTAAAAGTTCAACTACAAAAACTAATCACAACAAACACTTAAAGATTCATCATTCACGTGATCCATTTACAGTGGAAGTATAA
Protein Sequence: MTENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGNGVGGALASVLAGDNSKTDSGSKKSNNNDLDDKPLPNDKDENELNIASAGNSCSASSSNSISNGSDANQCSNSSSQNSNNVLNFSVTKNERNNEAEKDKCTASSSSTTTMTAKAVIKTETTKTVVMTKENVMTRNANENVNSFNNQQNNNQTNSTSTTNSSHSYHSNTVELTNASQIHNSNSFNMFSGNSRYDHQQQQQQQQQRNQQTVPPHMPPPPAPVSVSSQAQHAGQNHELGRGSIMPASTSSGTFHSLQPQQLPPPPPPHHTSSHLGNTSSSSHRPAHMFATGQPQATPSNSHHHQQQSLKVIYTPNLPPPPPLQLFTYQPQTHLQHHQKPPPAYGTAISQIRSQHNQNKHQVTGSLATTQHQNQTHTILQQQHNLQQQQQQTLHNMRIQVPPPPPPMPIPTKHTYSAKSNSLSTQQHPTATITPSSSRHNSHQNQQNQHISKTDLNHHQHQQQSQNNLDNTQNTNSSQIFNSHDISNKSIKGGITISAIGPNHSSNNNNVTSSYPQVSISPSVASASMAAVAASTLSRHTNSPFAALLAAAAGAPSPSNTASSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDEDDDDEEDNANDHTKRGGQVDKEHQEIVENKSKQNETHSDKVKDQMIGEKLRQKKDDKISTEVNKNNKKSKINDDDETNGDNDIVDFVSISSDSGDEEEFIAQEQKQLKSTTDKNKNNQLLNNTSTSTLSSNTTTSYTTSATSSVSDEQPSTSSSASSSTSSLAATNNNQTQQNSSGPSTSNTTSTRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAAQRKTFASIAPIPLVKIEKEEPMDEYTTGTPTKSNFETPLRPPITPLKANKHETDEITDPPSSSNNNSNINRKTINNPNVILTNDVERDDDDEQDEKKPQVFENETTTSNAFSNNTSSQMTINSSHVTSVIRMATTSQPQHQVNPQSQAPGQQLNSSSEANKNLNQAEDLSQNQRKIQPIQTPLTRKGPKKLVIKPKSSKTDNIPSNNSTTTKPNENQVRDNQQELPSTSSKARQDLTKQSSLKEEDVIDIKVKNEPITSIAYENQQEQHNTSNANAYKPPPNSFSILEQHLNSKEPILEFKEEKPCIQETTVPTTPTTIIKEMKVENNVNDDARVLYDFANSKKSQNEITPSTSSVVTNTFPSSTSLFSGKQTSVVNPINVEQHHQQPQQLTKTVSHHINDDNTSSSSNYSSQSAMDATMPTEDHNEHSAPANAQMLQQQTNHMYTDFHFNYLYNNGGNNVTPVVATTNDIKNPSEYSTFYQNPNQTLLLEDSSSSKHYTDFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNITPITSNHSISNINSAGTALSVDGNSATALDGTEVSKYLDLDSCKREQNIELVVGDRVPPPSSSTSCSFNGATDNSMAGICSTAVATLNIRTDEKMPAKGEISEQESNCDIDNSWSQPMYGDISARFFKTTFPGIFPQDNGWNNEEYFTVQDLSASTTAQATNSNSSRLKSFEPLTSSSSNNNNNSSGIPIFSNSNDNCNIDVMPSTSAKIRKRRKRSSQDDKVSQANNKRMQPTSTVTSQQMMMQHQNELTGIEFNFQQLPTHQQQLLQEPSTSSAFLAGPSNANNTGFMLQQQQQQQQLHPLQQQPQTQQQTQPKQRTKVYECGHCNAKYSKLKDRNAHMVDVHNYIRQNRRLICPTTGLATPLNTTDMQDVAAMPTTSAASGSMLLSRQLQNTECMSDNKQSIVKIENDNLQRDLNGLEPINANLSAKTEFLEDDKHLALVPINGGTNTECDTKPSTNNLPLSLTTPTSKLTTLYRMLVTFNMTTLKQNNNLSEIDENLIKSSIFFCYICRQNFNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCEKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKKNVRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYTEPMECPICKQIFAKASMKAHVATHSTETQYDCTICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGNKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -