Cruf006793.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Chrysomya rufifacies
Gene Symbol
RREB1
Assembly
GCA_014858695.1
Location
JACGTJ010028067.1:301-11178[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.024 1.3 9.6 1.8 1 21 256 276 256 278 0.95
2 13 0.00041 0.023 15.2 0.2 1 23 288 310 288 310 0.98
3 13 2.9e-05 0.0016 18.8 7.5 1 23 316 338 316 338 0.98
4 13 0.41 22 5.7 0.0 2 23 535 558 534 558 0.89
5 13 1.2 68 4.2 5.4 2 20 564 582 563 583 0.94
6 13 0.046 2.6 8.7 0.1 1 23 729 751 729 751 0.97
7 13 1.4e-05 0.00077 19.8 1.2 1 23 761 783 761 783 0.99
8 13 0.001 0.056 13.9 2.0 1 23 789 812 789 812 0.97
9 13 0.0038 0.21 12.1 2.1 1 23 1168 1191 1168 1191 0.95
10 13 0.00022 0.012 16.0 1.0 3 23 1532 1552 1530 1552 0.97
11 13 0.18 9.8 6.9 6.3 1 23 1558 1581 1558 1581 0.97
12 13 0.1 5.7 7.6 1.1 3 23 1758 1778 1757 1778 0.91
13 13 0.0012 0.067 13.7 5.7 1 23 1784 1806 1784 1806 0.99

Sequence Information

Coding Sequence
ATGTTAGTCGCCACAAATAATACACAAACTGCCCAAAATAATAGTCCTAAAGCAGCAACAACAACAACAACACGCTCCAATACACCCATCAAAATGGAAAGAAGAGATTCATCTTCATCCTATTCATCCTTAGAAGATTTAGAACATGAAACAAATAAATTAAATGCTGTTACCTCAACACCTGTAGTAACCAGTGATGCTACCGTTACATGTGGCATTAATGCCATAAGATCTTTACAAAGAGAGGGAGATACAGTGGAACAGCAACATAAATTAGATTACTTGCAGCAACAACACCAACAACAGCGCTTGCAAGAATCTGATGAAGCTAATGATTATGATGAAGATGAATCAGCAGATGAAAAATCCGCCATACAACATACAAGACAACAATTACATTATAAGAGACGTTTAAGCGGACGTAGTTTAACAGATAAAACATCAAATGTTTTACTAGAATATAATGCTGATAATCCCAATTCTTTACGCAAGAAATTTCGCTTTAATCGTTTTGCCCTTAGTAATGGTGATGAATCGGGTTTCATTGATGCCACCACCACCAACAGCACGAACACCACCACCAACAACAACAACAGCAACATTACCAATAATAGTTTGAATAATTCTACAAATATTCAAAATCAAACAAATCTTAATGGTACAAAATCGAATAGTTCTTCGGATAACAATTCATCATCATCGCCAACACAAAGTAATGGTAATTCTAGTCCAGAATCGGGTATTGGTGAAAGAGAAGATATGAAATATATGTGTCCCATTTGTGATGTAGTTTCACAAACTGCACATCAATTTACAAATCATATACGTTGTCATAATTATGCCTCAGGGCATACGGAGAATTTCACCTGTCGTATTTGTTCAAAGGTTCTCTCATCTGCCTCTTCATTGGATCGTCATGTTCTAGTACATACAGGAGAAAGACCATTTAATTGTAAATATTGTCATTTAACATTTACCACAAATGGCAATATGCATCGTCATATGCGTACCCATAAACAGCATCAACATACTCATCATCGTAGGAACTCGAATGGAACTAAGTTCAACTCAAACTCTAGCAGTAATAATAATAGTAATAACACTACAAAAACAACAACCACAACAACAACAGCAACATTAAGCAATGGACAATTAACAGAAGGCGTTAAATTATCACCATCAACTACAACAACATCTAATCAAATAACAGCAACAGATAATACAACAAACACAATAACATCTGCCAACACAATTACAGACAATGAAAAGTTAACAGCAACAACAGCAGGTGCTAATGACAAACGATTAAATAATGGTAACAACACAAACTTAGAAAGTTATGAAAGTGATGGTGGCTGCTCATCAGATTCATCAGCAGGTCGTGTTTCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTAAAACTCCCGCTGAAAATCAACAACATGAACTTTTAAAGAAATGTTTAAGAACCGAAAACGCCGCAACAACAAATGATGAACTTATTTGTCCCGTTTGTAATGAAACAGATTTTGCTAATAATTCCGCTCTAGATCAGCATATGGATGCTAAACATCCTGAAATTATGGTTAAATGTAAACATTGTAATGTTTATTTTCGTAGTCATCAACAATTAAGTTTACATTATTGTCCGGCAGATGTTAAATGTTCGATTAATTTAAGTCTAAAACAAAGACGTTTAAGTGAAGATACATTTTCCCATAACAAACATGCAGAAGACTGTGAGGATGAAGATGAAGAGAGAGCAGAGCATTTAAGAAAAAATCATGAACTCTTTCAGCACTTTAAAAATGCCATTGCTTCGAGTCAATCGCCTGTTTCAAATTATCCACAAGATCTCACCGAAGATGATATTAAATCAGAGCCTTCGGCTCATGATTCGAAGGATTTGGCTGATATACAATCAATTTTGAATATGACTGCTTCATCTAGTAACTCAAATTTGTTAAGGAATTTTGAACAATCTGTTAATACTCCCTCCTCACAATACAGTTATGATCGGGATGAAGAAGAGGCTCAAGATGCTTTTACTTCAGAATTTAGAAAAATGAAATTGCGTGGTGAATTTCCTTGCAAACTTTGCACGGCAGTTTATCCTAATTTACGCGCCCTTAAAGGTCATAATCGTGTGCATTTGAGTGAGGCTGGACCAGCAGGTCCTTTCCGTTGTAATATGTGTCCTTATTCTATATGTGATAAGGCCGCCTTAATTCGTCATATGCGCACTCACAATGGAGATCGTCCTTATGAATGTGCTGTTTGTAATTATGCCTTTACCACCAAGGCGAATTGTGAACGTCATTTGCGTAATCGTCATGCCAAAACTACTCGTGAAGAAGTTAAACGTGCCATTATATATCATCCTTCAGAAGATTCCTCATGTGATGATACCTCTAAGAAATTGCATATGTTTTCCGGGGATTTGGAGGATGATTGTGATTTGATGTCCTATTCTCAACATCAACCCAAAGATCGTTCTACACCCGTGTCACATCTTAAAGAAAGATTGATATCAGGTGACAGTCCTTCTTCTAAACCAGTTAAGATCCAAGTAAAAAATCTTGAAGAATTACTAGATAAATCTACCGCCTCCTCGGGTTATCATGATAGTTATGATAAACGTAATATGGACACTTCTCAAGCGCCCATTGACATGAGCATGGATGTTTTGGATTTGAGTAAAAAACCTACAGCACCCGTGGCAGCAGCTGCTCCAGTACAAGAAGAAAAAGTTGAATCTTCTATACCTTTACTAACATTACCAAAGCCTGCCTTGCTACATAGCAATGAATTAAATACTTCAAAACCTGCTGCAGTAGAAACTGATCCAAAATTGGATATTTCCGCTTTGGATAAGCAACAACAGCAGTTGCTCTTGGCTCAACAACAATTGTTAAGTGATCCCAATCAGTTGATGCAACAATTGTATCGTAATATTTTCTTTCCACAATTTCCACCTTTCTTTATGCCTAATACTTTTATGAATACCAATTTCAATGAGTTACAAAAAATTGCTCCACTTCTATCACGCATGATGGGTGGTGTTGCAGCAGCTTCTATGCCAAATAATGATATGGAAAAGCCCGCTTCTTTAGCTACACCTTTGGCAAATAACACACCCAGCCTCTCACAAATGAGTCCTTTGTTAACGGAAAAATCTAACTCCTCTGCTACGATGCCTTCAATGTCATCTCCAAAGAATTTACTATCACCAAATCCCAATCATATGCCTTTGCCTAGACATATGATGCCAACTAATGGTCCTTCTCATCCAGCTAATTTGCCACCCACAATGCTGTCAAATGGTCCTGTTAAAATGGTACTAAAAAATGGTGTTTTCATGCCTAAACAAAAACAAAGACGGTATCGTACTGAACGTCCCTTTGCCTGTGATCATTGTTCGGCCCGCTTTACTTTACGCTCAAATATGGAACGTCATGTCAAGCAGCAACATCCTCAATTTTACGCCCAACGCCAACGTAGTGGTCATCATGTTATGCGTGGTCGTGGTGCCAGCAGTGCTGCAAACATGAATAGCATTTCTCATTTACAAGCTGCTATGAGCCAAAGTCATTATGGTTCTACTCCCAACCCCATAACATCACATTCACCCATTTCCGATCAAGTTAAATGTGCCATATTGGCTCAACAACTTAAGGCTCGTAAAGATACCGATTTGCTCCAACAAGCCTTAGCTCATGGTTCGAATAGTGTAGCCCAGGCTAATATGTTTTCACAACAAGCCGGTAATCTCGGCAATGGACAAACACCTTTTTTTGGCTTTAATCCTCATCATGCACATCACTTAAGTCAAAATGGTACACCCAATGGTTCTATGGAAGATGATGAACCCAAACTTATCATCGATGAAGATGATGAAGAGGAGGAAGAAGAAGAGGAAATTGAAGAAATTCCCGATGATCATGAGGAGGAAGAAGAACAAGATGTGGTCTTAAACGATAGAGCAGAGAAATTAGAAACCCAACATTTACCCACTACAGTGGAAGAAGTAAAGCTCAAATCAGATGAACCCCAAGAAACTGCCAAAAAAGTAGCTGAATCTATTTTAGAACAGGCAATTAAAGCAAGACAAAGTATAAATTCTCTTAGCAAAACCTCAACAGATTCCTCATCAGCTGCCGCAACACAAAATAATAACACCATGAAATCTATGATTGCTCAAGCTCCAGCAGTGGGTAAATTTCTAAAGGATGTAGCTAGCTCCTCATTTAAAGATGAATCCCAAGACTTAGTATCGGTTTCCGAATTAGTTGATAATGCTACTAATAATGCAGTATCCTTCAATAACTACTTCCGCCCTTCGGATGTAGCCAATCATATGGAACCCAGTGATGAAGATGGTTTAGTGGCTTCTTCGGCCAGTGAAAGCAATAATTCGGGTGCTGAAGATACTGCTAGCACTGAAAAACCTAAAAAGAAATCAGCCTACAGTTTGGCACCCAATCGTGTACACTGTCCCTATTGCCAACGCATGTTCCCCTGGTCTAGTTCTTTGAGAAGACATATTCTTACACACACCGGACAAAAGCCTTTCAAATGCTCCCATTGTCCTTTGCTCTTCACCACCAAAAGCAATTGTGATCGTCATCTTTTACGTAAACATGGTGATGTTAAATCGGCAGTCTCCGTGTATGTACCAACTGAAGATGTCAATGAACCTATACCCCTGCCCAAATCCGTTGAAGAAATCGAACGCATGCAAAGAGAACGTGAGGAGGAGGAACGTAAACGTAAAGCAGAAGAACAAAGAGAGCGCTTAGAAAAAGAACAATTGGAAAAGCAAAAATTTGAACAAGAACAACAGCAAAAGCAAGCTTTCCTTAAGCACCTGGCTGTAGCACAATTTCAACAACAATTCAGCCAAAAACCGGAAACCAATTCAGTATCCTCTTCAGAGCTGCCCTTCAAATGCCATTTATGTGAAAGTTCTTTTGCTGAACGTTTACAATGTTTGGAACACATTAAATCCTTACATGCTCAAGAATTTGCTCTTTTGCTGTCGAAGGGAGCCATAGAAAATGATGCAGACTCCAGCCATATGAACTCCACTGAAGAAGATGAACGTCAACGTACGAATGAAGAAAATGCCAAAGGTGGCAAATATCCTGATTATAGCAATCGTAAGGTTATATGTGCTTTTTGTATGAGACGTTTTTGGTCTACAGAAGATTTGAGACGTCATATGCGTACCCATTCCGGGGAAAGACCTTTCCAGTGTGAAATCTGTTTTAGGAAATTCACTCTTAAGCATAGTATGTTGAGACACATGAAGAAACACAATGGTCATCATATGAATGGTAGTCAAACATCCAGCGATAATATGGGTAATGGTAATTCCGGCTCTGATTATTCGGATGATGAACAAGGACCTAACAATTTGCCAGCCCCAGCAATGCCTTTGCCTAATGCTAGTTTAAATGCTTTATTTGTGGGTTCAAAAATTCAAGAACTTTTAACTAAAGCCAATGAATGGCGCAATGGCAATTTAAATGCTATGCGTGAGGGCAAAGAAAATAATGCCGAAGAAACGAATACACCGCAAACATCAGATTTAATTGGTAATCTATTGGGTATCAGTGATCAGGGTATATTAAATAAATTAATGTCCTCCCCTGATGAGGCTGCTAAGTTTTTAGGTGTTGAAAAGTAA
Protein Sequence
MLVATNNTQTAQNNSPKAATTTTTRSNTPIKMERRDSSSSYSSLEDLEHETNKLNAVTSTPVVTSDATVTCGINAIRSLQREGDTVEQQHKLDYLQQQHQQQRLQESDEANDYDEDESADEKSAIQHTRQQLHYKRRLSGRSLTDKTSNVLLEYNADNPNSLRKKFRFNRFALSNGDESGFIDATTTNSTNTTTNNNNSNITNNSLNNSTNIQNQTNLNGTKSNSSSDNNSSSSPTQSNGNSSPESGIGEREDMKYMCPICDVVSQTAHQFTNHIRCHNYASGHTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCHLTFTTNGNMHRHMRTHKQHQHTHHRRNSNGTKFNSNSSSNNNSNNTTKTTTTTTTATLSNGQLTEGVKLSPSTTTTSNQITATDNTTNTITSANTITDNEKLTATTAGANDKRLNNGNNTNLESYESDGGCSSDSSAGRVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTPAENQQHELLKKCLRTENAATTNDELICPVCNETDFANNSALDQHMDAKHPEIMVKCKHCNVYFRSHQQLSLHYCPADVKCSINLSLKQRRLSEDTFSHNKHAEDCEDEDEERAEHLRKNHELFQHFKNAIASSQSPVSNYPQDLTEDDIKSEPSAHDSKDLADIQSILNMTASSSNSNLLRNFEQSVNTPSSQYSYDRDEEEAQDAFTSEFRKMKLRGEFPCKLCTAVYPNLRALKGHNRVHLSEAGPAGPFRCNMCPYSICDKAALIRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHAKTTREEVKRAIIYHPSEDSSCDDTSKKLHMFSGDLEDDCDLMSYSQHQPKDRSTPVSHLKERLISGDSPSSKPVKIQVKNLEELLDKSTASSGYHDSYDKRNMDTSQAPIDMSMDVLDLSKKPTAPVAAAAPVQEEKVESSIPLLTLPKPALLHSNELNTSKPAAVETDPKLDISALDKQQQQLLLAQQQLLSDPNQLMQQLYRNIFFPQFPPFFMPNTFMNTNFNELQKIAPLLSRMMGGVAAASMPNNDMEKPASLATPLANNTPSLSQMSPLLTEKSNSSATMPSMSSPKNLLSPNPNHMPLPRHMMPTNGPSHPANLPPTMLSNGPVKMVLKNGVFMPKQKQRRYRTERPFACDHCSARFTLRSNMERHVKQQHPQFYAQRQRSGHHVMRGRGASSAANMNSISHLQAAMSQSHYGSTPNPITSHSPISDQVKCAILAQQLKARKDTDLLQQALAHGSNSVAQANMFSQQAGNLGNGQTPFFGFNPHHAHHLSQNGTPNGSMEDDEPKLIIDEDDEEEEEEEEIEEIPDDHEEEEEQDVVLNDRAEKLETQHLPTTVEEVKLKSDEPQETAKKVAESILEQAIKARQSINSLSKTSTDSSSAAATQNNNTMKSMIAQAPAVGKFLKDVASSSFKDESQDLVSVSELVDNATNNAVSFNNYFRPSDVANHMEPSDEDGLVASSASESNNSGAEDTASTEKPKKKSAYSLAPNRVHCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGDVKSAVSVYVPTEDVNEPIPLPKSVEEIERMQREREEEERKRKAEEQRERLEKEQLEKQKFEQEQQQKQAFLKHLAVAQFQQQFSQKPETNSVSSSELPFKCHLCESSFAERLQCLEHIKSLHAQEFALLLSKGAIENDADSSHMNSTEEDERQRTNEENAKGGKYPDYSNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCEICFRKFTLKHSMLRHMKKHNGHHMNGSQTSSDNMGNGNSGSDYSDDEQGPNNLPAPAMPLPNASLNALFVGSKIQELLTKANEWRNGNLNAMREGKENNAEETNTPQTSDLIGNLLGISDQGILNKLMSSPDEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-