Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: -
Assembly: GCA_014858695.1
Location: JACGTJ010020092.1:6866-10208[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0084 0.46 11.0 3.4 1 23 255 277 255 277 0.98

2 7 0.0011 0.059 13.8 4.3 1 23 674 696 674 696 0.99

3 7 6.1e-05 0.0033 17.8 0.9 1 23 702 724 702 724 0.98

4 7 7e-06 0.00039 20.7 2.3 1 23 730 753 730 753 0.96

5 7 3e-07 1.7e-05 25.0 1.6 1 23 759 781 759 781 0.98

6 7 8.3e-05 0.0045 17.3 3.3 1 23 787 809 787 809 0.99

7 7 5.2e-07 2.8e-05 24.3 0.6 1 23 815 837 815 837 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0084	0.46	11.0	3.4	1	23	255	277	255	277	0.98
2	7	0.0011	0.059	13.8	4.3	1	23	674	696	674	696	0.99
3	7	6.1e-05	0.0033	17.8	0.9	1	23	702	724	702	724	0.98
4	7	7e-06	0.00039	20.7	2.3	1	23	730	753	730	753	0.96
5	7	3e-07	1.7e-05	25.0	1.6	1	23	759	781	759	781	0.98
6	7	8.3e-05	0.0045	17.3	3.3	1	23	787	809	787	809	0.99
7	7	5.2e-07	2.8e-05	24.3	0.6	1	23	815	837	815	837	0.99

Sequence Information

Coding Sequence: ATGGAATTAAACGAATACAATGGTTTCGCCGACCATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAGGAAGGGATTTAAAAGGGAAATTTGTGCAAAAGGAAACTCATAACATAGACACCATGGAGCAAATTATGCAACGCAAGGAGCAAGAGTTTATAGATCAAGCTTTGCTGGCTCCTGAGTACATGAGAGATCCCAATCATTTCATTATGGATTTAATGAACTTCCCAAAAACTGAAACTGGAGTCCATAACAATGCAGATAATTTGGCTTCAGATTTACACTTCCACAATAGTTTGTTTCCCGTGAACACGGATGATCATCAGCATGCAAATGAGTCACGTAAAACCCCCAATAATTCGGTATTTTTACCTTTAAATAACGATTTTCTTATGCCGGTACAAAAGTCTTATAGCACCAATGTAGACTCTGTGGTCACAGAAGTGGACAATGGTGTTAAGGTGGTGCAGCAATTGCTACTAACGGATTCTAATGTCACATTGGATGACGCCTCCATTGATGATGACTGTGATTTGAACCGTTTTAATTCACGCAAAATCTTGCCCCATAAAAAACGCATTTCACGCAAACTGAAAATTAATCACTGTGATTCAGATCTACAACTAAATGTTCCTCTGGAGGATCATAAATTACCACATGTTGATCAATTGGGTGTTGGTGTGGGTCCGGCTAGTATGCAACAGTTTCGTTGCGAAATTTGTGGCCATGCTACTTGTTCGCAATTGGATTTTTTTGCTCATCTTAAACAGCATTATGAACCGACCACACCAGATACTATATTGGCTGCTATGAAAACATCATTAGATGTTTTGGGTCCAGAAAAATCGGCAGTAGATTTATGTGCCATTAAAAAGACTGACGGACTTGATCAAGTTTTCCAAGATGTACATTTTCCTTTTGAGAACTTCACCCCAACTGCAGAGGTTGTTTCTGTACGTGTAGTTATGGATCCTCAACATCAGCAGCATAATAATGCTGATGGTTTGGGAGAAACTAATATAAATGTTGCAAATTCTGCTTTGCAACAGCAACACAATCAACCTTTACAACACCAGCAGCAACAACAACAGCAACAAACACCACCAAATCTAGTGCCCGAAGAATTTAGTGATACAGAAGATATGCTGGAAGGCATAAGGGATAAAGTGCTAATAGAAGATACCTGTGATACAATGGATCTAATGACACCAACATCAAATGGTACCAGGCCGCATTGGTTCACAAACAATTGTTTTAATGGTATCGATTTGAAATCAAAACCATTCTGTGATGTTTTATTTTCGGGTCAATTTGCTCCTATTTTGAATACAGATCCAACGGTGCCTCTTATGCAATCAGAACCACATTTATCATCTGGGAAAATGATGCATAGAGAACTTGGTCCAGATCCCATTGAACTCCAACCTCCCGGGAAAATAATGCATAGAGAACTAGGACCCGATCCAATTGAATTACAACCTCCTATAACAAATAATCCACCACCAACACAACTTTCCCAAACAGTACAAAATGAACCAGATTTACGATTAGAATTTGTCCACACCCAGAGCAATCTGCATCATAATGAATCCTGTTTACAACAGGAACACCAACAAATTCCTTTGCCATCCCACCAACTCACGGATCAGCAAATTCTACACACTCAACATATAAAAATTGAACAAACTCCCCCTCATCATATCAGTGACATTCCCTATCAAAATTCCGAAGACACTTTAAGTGGCCATGAGCAAGATCCTGAACTTGAAGATGACCACCATGACAATGAAGATACAGATGAAGAAGAATATAATTCTCAGTTAGAACAGGAAGAATTTAAATTATACTCTCAAATCAAAACCGAAAGAGATTGCTGTGATGATAGTAACTTGGAGTGTGATGATGGCGAAGAATTGGACACAGAAAATGGAGAAATAGTTGAAAATGGCAAACGTAAACGTTATGTTTGCAATAAATGTCAACGTATCTTCAATTCTTGCAATGCTCTCAAATACCACAATCGTACACATTCCGGTCTTCGACCTCACCAATGTGAGATTTGTAATAAGTCATTTTTTGCAATAGGTGCCTTAAAAGCCCACACACGTACCCATACCGGTGACAAACCGTTCGAATGTAAACACTGTGATCGAAAATTTCGACAATGGGGTGACTTAAAATATCATACCATATCCATACACAGCACCGAGAAGAATCATCAATGTGAATTTTGTGGCAAAGCGTTTTCACGCAAATATTCGTTGGTGGTACATTTAAGGATACATACGAGTGAAAGAAATTATAAATGTGAATTTTGTACGAAAACTTTTAGGGCGAGTACATATTTACAAAATCATAGGAAAATTCATACAGGTGAAAAACCTTATGAATGTGATGTTTGTTCTAAAAGATTTCGTGTCTCTGGCGATTTACGTCGTCATCAACGCATACATGAACGTAAAAAGCAGAAGGAGTTATTAATGAAACAAAATAAAGAAGCAGAAGTTTAG
Protein Sequence: MELNEYNGFADHXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGRDLKGKFVQKETHNIDTMEQIMQRKEQEFIDQALLAPEYMRDPNHFIMDLMNFPKTETGVHNNADNLASDLHFHNSLFPVNTDDHQHANESRKTPNNSVFLPLNNDFLMPVQKSYSTNVDSVVTEVDNGVKVVQQLLLTDSNVTLDDASIDDDCDLNRFNSRKILPHKKRISRKLKINHCDSDLQLNVPLEDHKLPHVDQLGVGVGPASMQQFRCEICGHATCSQLDFFAHLKQHYEPTTPDTILAAMKTSLDVLGPEKSAVDLCAIKKTDGLDQVFQDVHFPFENFTPTAEVVSVRVVMDPQHQQHNNADGLGETNINVANSALQQQHNQPLQHQQQQQQQQTPPNLVPEEFSDTEDMLEGIRDKVLIEDTCDTMDLMTPTSNGTRPHWFTNNCFNGIDLKSKPFCDVLFSGQFAPILNTDPTVPLMQSEPHLSSGKMMHRELGPDPIELQPPGKIMHRELGPDPIELQPPITNNPPPTQLSQTVQNEPDLRLEFVHTQSNLHHNESCLQQEHQQIPLPSHQLTDQQILHTQHIKIEQTPPHHISDIPYQNSEDTLSGHEQDPELEDDHHDNEDTDEEEYNSQLEQEEFKLYSQIKTERDCCDDSNLECDDGEELDTENGEIVENGKRKRYVCNKCQRIFNSCNALKYHNRTHSGLRPHQCEICNKSFFAIGALKAHTRTHTGDKPFECKHCDRKFRQWGDLKYHTISIHSTEKNHQCEFCGKAFSRKYSLVVHLRIHTSERNYKCEFCTKTFRASTYLQNHRKIHTGEKPYECDVCSKRFRVSGDLRRHQRIHERKKQKELLMKQNKEAEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01259460;
90% Identity: -
80% Identity: -