Cruf000042.1
Basic Information
- Insect
- Chrysomya rufifacies
- Gene Symbol
- ZNF212
- Assembly
- GCA_014858695.1
- Location
- JACGTJ010001157.1:1-2635[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00049 0.027 14.9 0.6 2 23 117 139 116 139 0.95 2 12 2.7 1.5e+02 3.1 6.6 1 23 145 168 145 168 0.96 3 12 1.3e-05 0.00074 19.8 1.1 1 23 175 197 175 197 0.98 4 12 0.59 32 5.2 3.5 2 22 269 289 268 291 0.77 5 12 0.083 4.6 7.9 2.0 1 23 297 320 297 320 0.98 6 12 2.6e-05 0.0014 18.9 0.5 2 23 328 349 327 349 0.97 7 12 4.9e-05 0.0027 18.1 2.4 3 23 357 377 355 377 0.98 8 12 5.9e-05 0.0032 17.8 3.8 1 23 510 532 510 532 0.99 9 12 1.6 87 3.9 4.4 1 23 607 630 607 630 0.95 10 12 0.017 0.91 10.1 0.2 1 21 636 656 636 660 0.92 11 12 0.00012 0.0067 16.8 1.2 2 23 666 687 666 687 0.97 12 12 1e-06 5.6e-05 23.4 1.6 1 23 693 716 693 716 0.96
Sequence Information
- Coding Sequence
- ATGGAAAATAGATCTAATTATGCTAAAGATCCTATAGAAGCAAGAAAACCGCAAAATAAATTGAATGATAACAAAGTCAGTGCATCAGCAGCTAAAAAATTGAACGATTTTCCCATTGACACAAATTATCAAATTAAAAATGAATTTTTAGACAATGAAGAAAATGCAGATGAAAGTGCAATAATGGATGATACTAACTTTTGGGCTAATCCTGAAAATTCCCAGGACGAAGGAGAAAATTATTGGGATCATAGTATTTTAACAGATTTTCACAGTGAAAATAATGAAGATGCCTCATCTTCTAAAAGGGGCAGCTATAATTTGAGTAAAGTGTATGAGGTGGAAAGTAAATGTGCGGTTTGCTTAAAGAATTTTTCCTCCCAAAGAGATTTGATTAAACATGTTAAAGAATATCATCCCAATGATAAGGCATTCAAGTGTATACACTGTACTACGGTATTTTCCAAATTGAAATCAATATCTACTCATTTGAAAAGATGCCATCCCGATTTGGCAGATACTTATTCATGTAATTATTGTAGTAAAGCTTTCTTCAGAAGAAATCTATTGGAACGACATGTACTAATACATGCTGATGAAATAGCTGAAGAAGAACAAAGAAAAGTAAATGATTATTATACGAGTAATGACAATGAAGATGATGATAACAATTTTGGATCGTATCAAAGTATGGATGATAATAATACCTTTGATGTGCGTAAAAGTATTGAAGATAATAATTCAAATGAAAATAGTGCGGACATTTTTGAAAGACGTAAAGGAAAAATTTATCCTATTGAAGATAAATGTGGTATTTGTACAAAGAAATTTTCACATCAAAAAATCCTCATCTGTCATGTTCAACGTTCTCATCCAAATGAAAAAGCCTATAAATGTCTATATTGTGCAACATTATTTTCTAAATTAAAATCCGTTACAACACACTATAAAAGAGGCCATTCGAAATTGCCCAAAAAGATAAGTTGTGACATTTGTGGCATGTCCTTTTATACAAAATTTCTACTGGACCGTCATAAACGTGTACATGTTGAAATAAGGCCATTTGGTTGCAATCAATGTGATAAAACCTATAAATATAAAAGAAACCTACTTGTACACAAAAAGACGCATTTAAGAGATAAAAACAAAACGTTAAGTGCTAACGATAGTAATGAGCAAGAACTAATTGACAATGAAGATGAGCAGGAAGAAGATGAGTATTACGAGAATGAAGATGAAAACGAAGAACAAATTGAAATTTCTGAAGATGAAAACAAAGGACAAGATAATGAGGATGAAAGTCTAGAATCAGTAGAAGAAGATTATGATAATTATAAATATAATCTACCATCTTTTAAGGCAGATGAGTATTATGAAAATGACGATGATGATTATGGTGAAGATGATTATGGTAACAATCAAAATGAAGATCAGGAATCTAGTGGCAATCAAGAAGAAAACTTAAATTTACCAAACATTAACACTAAGGTGGGGGGAAATTATAATAGCCGAGGTGAATATTGTCCATTTAAATGTGGTGTATGTAATCGGGTTTATAGCTATAAAAAGACCTTAAAATATCATCAAAAGAAACATAATCATTTCGATTCAACAAATGTTAATGATTCTATAGCAAATGAGTCTAATGTAACTAACAATGTTACCGCAAATAATACGTATTTTATAATAGAAGAATTTAATGCAGATAATGCTAATATTGAAAATTTAGAAAATGAAGAAGATGATTATTTTACTCCTGATTTTACAAATGAAACTAATTACCATGATTACTCACAAATACCATCTAATGTTAGTCAATTTGATTGTGGTGTTTGTACTAAACAATTTAAATGTCAACAAGCTGTAGCTAAACATTTACAACGTTGTCATCCTGAAATAGAATTTTTTAAATGTCCCTATTGCGATGATAATTACTATAGTCTCGAAACACTAGCTGAACACATTAAAGACGTAAATCATCCACAAAAGCGTAATGTGTGTGATTTGTGTTTGAAATCATTTGATCGCGGTACCGATTTACGACGCCATCGAAGAACTCATACCGATGAACGTCCTTATATTTGTAATATATGTCAGAAATCCTTTAAACAAGATGCTCATTTAAAACGTCACATGGATGTAATGCATAGTGGTATGAAACCATTTATATGA
- Protein Sequence
- MENRSNYAKDPIEARKPQNKLNDNKVSASAAKKLNDFPIDTNYQIKNEFLDNEENADESAIMDDTNFWANPENSQDEGENYWDHSILTDFHSENNEDASSSKRGSYNLSKVYEVESKCAVCLKNFSSQRDLIKHVKEYHPNDKAFKCIHCTTVFSKLKSISTHLKRCHPDLADTYSCNYCSKAFFRRNLLERHVLIHADEIAEEEQRKVNDYYTSNDNEDDDNNFGSYQSMDDNNTFDVRKSIEDNNSNENSADIFERRKGKIYPIEDKCGICTKKFSHQKILICHVQRSHPNEKAYKCLYCATLFSKLKSVTTHYKRGHSKLPKKISCDICGMSFYTKFLLDRHKRVHVEIRPFGCNQCDKTYKYKRNLLVHKKTHLRDKNKTLSANDSNEQELIDNEDEQEEDEYYENEDENEEQIEISEDENKGQDNEDESLESVEEDYDNYKYNLPSFKADEYYENDDDDYGEDDYGNNQNEDQESSGNQEENLNLPNINTKVGGNYNSRGEYCPFKCGVCNRVYSYKKTLKYHQKKHNHFDSTNVNDSIANESNVTNNVTANNTYFIIEEFNADNANIENLENEEDDYFTPDFTNETNYHDYSQIPSNVSQFDCGVCTKQFKCQQAVAKHLQRCHPEIEFFKCPYCDDNYYSLETLAEHIKDVNHPQKRNVCDLCLKSFDRGTDLRRHRRTHTDERPYICNICQKSFKQDAHLKRHMDVMHSGMKPFI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -