Basic Information

Insect: Chrysomya rufifacies
Gene Symbol: azf1
Assembly: GCA_014858695.1
Location: JACGTJ010000140.1:3171-5896[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 3e-06 0.00017 21.9 0.5 2 23 288 310 287 310 0.96

2 8 0.0016 0.086 13.3 8.0 2 23 318 340 317 340 0.96

3 8 7.1e-05 0.0039 17.6 4.4 1 23 358 381 358 381 0.97

4 8 2.6e-06 0.00015 22.0 1.9 3 23 424 444 423 444 0.99

5 8 0.001 0.057 13.9 1.4 1 23 450 472 450 472 0.98

6 8 2.5e-07 1.4e-05 25.3 1.6 1 23 478 500 478 500 0.97

7 8 2.4e-05 0.0013 19.0 2.7 1 23 506 528 506 528 0.99

8 8 4.7e-06 0.00026 21.3 0.8 1 23 534 558 534 558 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	3e-06	0.00017	21.9	0.5	2	23	288	310	287	310	0.96
2	8	0.0016	0.086	13.3	8.0	2	23	318	340	317	340	0.96
3	8	7.1e-05	0.0039	17.6	4.4	1	23	358	381	358	381	0.97
4	8	2.6e-06	0.00015	22.0	1.9	3	23	424	444	423	444	0.99
5	8	0.001	0.057	13.9	1.4	1	23	450	472	450	472	0.98
6	8	2.5e-07	1.4e-05	25.3	1.6	1	23	478	500	478	500	0.97
7	8	2.4e-05	0.0013	19.0	2.7	1	23	506	528	506	528	0.99
8	8	4.7e-06	0.00026	21.3	0.8	1	23	534	558	534	558	0.92

Sequence Information

Coding Sequence: ATGCACAATAAAGAAAAACTAGAAAGCCAACAGTGTCGTACTTGTTATAATGCCACCAAAGGCTTAAAACAACTAACAAATCTAACCAAATATGGAAATGGTGGAGCACAACAGAAATCGTACGCAGAACTTTTGGCAGAAATAACTAAAATAAATATCTTGGAAGACTGCAGCGAAAAAATGCCAAAGTTTATATGCGACAGTTGTTCCCGAAAGTTAAAAGCAGCTCATGCTTTTGTACAACAAACGCATGAAGTTAATGAGCGTTTAATGGCTTTGATTATTGAAAAAGAAGGAGAGGATGATACTAATAGTCAATTGGATTGCTTAAAAGAAGCCCAGGTGGATATTGAATCATGTTTGGAAATAAAAATGGAACAGAACGATAAAACTGTGGAAACTGAAATAAATTGTCCGGTAGATTTAAAATTAGAAGTTATTGAAGAATTGCCACAACATGTCCAATTGGAAAAGGAAAAACTCAACGAAAAGTTAGAAGCAGACAATGGCGACAAAACTATGCAAATAGTAACATTAAAAGAGATAAACGTTTCTCAATCTACAATAGACCATAGTGTAACAGAAACTATAGAAGATATATTCAAAGCAGATAATTCTAATTCTGTAACAGATCTGTTTAGAGATAATGAAAAAGATCTTTATGACAATAATACAACAAGTGATGATGATAATGATCAAAATGATAATCATTCAACTGAAGACATGGAATGGCAAACGGAAAATGAACAAAATAAATTAAATAACAAGAAAAATATTAAGAAAAATAATAAAAAATCTAATAAATCGGAAGAAAAAATAGATAAACCTCCCGAAAATGGTGGCGATGACGATGTAGCGGTACCATGTACGCAGTGTAATAAAATATTTGATAATTCTAAAGCATTAGCACGCCATCAACGTACTAGTCATATACCAGAAGATCAAAAATGTACTTGTCCTTTGTGTTTTCGTAAATTTTCACGTTCTTGTAATATGTATACACATATGCGTACATTTCATGGTCCCGATACTGTGCCACTCATACGTAAACCCTCAACAGAGGAAAGAACATTTCAATGTGATAAATGTCCACGTAATTATACCAAAAAGAAACATCTTAATATACATATAAAGAATAAACATAGTCAGGAAAGTGAAAGTTCAATGAAGCGAGAAGAAAATATAAACGAAACTGAAACAAAAGCTTCTAAAGAGGAGGAATCGTTAAGCAAATCTAACAAACCTAAAAGATATGAAGTACGTTCATTATGTTCTATCTGCGGTAGTTCATTTTCAAGTAAAACTCATTTAATAGTACATATGCGCCGTCATACAGGCGAAAGACCTTTTAAATGTGACCTTTGCGATCGTGCGTATCCACGTATATCGGAATTAACTTGTCATCGTCGCATTCATACGGGTGAAAAACCATTTGCCTGTAAAATTTGTGGTAAAACTTTTCGAGTATCTAGTAAAATGACTACACATATGCGTTCACACACGGATATTAGACCATATAAATGTACACAATGTGAAAGAAGTTTTAAATATTCGAAAGATTTAAGTATACATTTTCGTATACACACGGGTGAGAGACCTTATAAATGTAATATTTGTGGCAGTACGTTTACCCAGAGTAATACGTTAAAAGCTCATCGCATGAAATTGGGTCATATGGATAATGTTGTAGAAAATTCCAATAATCTAGTTTAA
Protein Sequence: MHNKEKLESQQCRTCYNATKGLKQLTNLTKYGNGGAQQKSYAELLAEITKINILEDCSEKMPKFICDSCSRKLKAAHAFVQQTHEVNERLMALIIEKEGEDDTNSQLDCLKEAQVDIESCLEIKMEQNDKTVETEINCPVDLKLEVIEELPQHVQLEKEKLNEKLEADNGDKTMQIVTLKEINVSQSTIDHSVTETIEDIFKADNSNSVTDLFRDNEKDLYDNNTTSDDDNDQNDNHSTEDMEWQTENEQNKLNNKKNIKKNNKKSNKSEEKIDKPPENGGDDDVAVPCTQCNKIFDNSKALARHQRTSHIPEDQKCTCPLCFRKFSRSCNMYTHMRTFHGPDTVPLIRKPSTEERTFQCDKCPRNYTKKKHLNIHIKNKHSQESESSMKREENINETETKASKEEESLSKSNKPKRYEVRSLCSICGSSFSSKTHLIVHMRRHTGERPFKCDLCDRAYPRISELTCHRRIHTGEKPFACKICGKTFRVSSKMTTHMRSHTDIRPYKCTQCERSFKYSKDLSIHFRIHTGERPYKCNICGSTFTQSNTLKAHRMKLGHMDNVVENSNNLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -